RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-222ENST00000545308 PEBP1P30086 187 aaKnown RBP2.53□□□□□ -2
SNHG1-222ENST00000545308 UGT2B10P36537 528 aa2.53□□□□□ -2
SNHG1-222ENST00000545308 TPM4P67936 248 aa2.53□□□□□ -2
SNHG1-222ENST00000545308 PMS2P3Q13401 168 aa2.53□□□□□ -2
SNHG1-222ENST00000545308 BCL2A1Q16548 175 aa2.53□□□□□ -2
SNHG1-222ENST00000545308 PTRHD1Q6GMV3 140 aaKnown RBP2.53□□□□□ -2
SNHG1-222ENST00000545308 LRRC25Q8N386 305 aaPredicted RBP2.53□□□□□ -2
SNHG1-222ENST00000545308 Q8N9L7 120 aa2.53□□□□□ -2
SNHG1-222ENST00000545308 APCDD1LQ8NCL9 501 aa2.53□□□□□ -2
SNHG1-222ENST00000545308 TTLQ8NG68 377 aa2.53□□□□□ -2
SNHG1-222ENST00000545308 OR1L1Q8NH94 360 aa2.53□□□□□ -2
SNHG1-222ENST00000545308 OR2AE1Q8NHA4 323 aa2.53□□□□□ -2
SNHG1-222ENST00000545308 CLHC1Q8NHS4 586 aa2.53□□□□□ -2
SNHG1-222ENST00000545308 ENKURQ8TC29 256 aa2.53□□□□□ -2
SNHG1-222ENST00000545308 CAPZA3Q96KX2 299 aa2.53□□□□□ -2
SNHG1-222ENST00000545308 TRNT1Q96Q11 434 aaKnown RBP2.53□□□□□ -2
SNHG1-222ENST00000545308 RSG1Q9BU20 258 aa2.53□□□□□ -2
SNHG1-222ENST00000545308 SHCBP1LQ9BZQ2 653 aa2.53□□□□□ -2
SNHG1-222ENST00000545308 FAM96AQ9H5X1 160 aa2.53□□□□□ -2
SNHG1-222ENST00000545308 C12orf4Q9NQ89 552 aa2.53□□□□□ -2
SNHG1-222ENST00000545308 ANXA10Q9UJ72 324 aa2.53□□□□□ -2
SNHG1-222ENST00000545308 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.53□□□□□ -2
SNHG1-222ENST00000545308 MGAM2Q2M2H8 2515 aa2.53□□□□□ -2
SNHG1-222ENST00000545308 IGHV7-4-1A0A0J9YVY3 117 aa2.52□□□□□ -2.01
SNHG1-222ENST00000545308 DEFB108AA8MXU0 73 aa2.52□□□□□ -2.01
SNHG1-222ENST00000545308 SMLR1H3BR10 107 aa2.52□□□□□ -2.01
SNHG1-222ENST00000545308 M0QXV9 152 aa2.52□□□□□ -2.01
SNHG1-222ENST00000545308 CDIPTO14735 213 aa2.52□□□□□ -2.01
SNHG1-222ENST00000545308 EIF1BO60739 113 aaKnown RBP2.52□□□□□ -2.01
SNHG1-222ENST00000545308 MYO1DO94832 1006 aa2.52□□□□□ -2.01
SNHG1-222ENST00000545308 ADRA2AP08913 450 aa2.52□□□□□ -2.01
SNHG1-222ENST00000545308 IL1RNP18510 177 aa2.52□□□□□ -2.01
SNHG1-222ENST00000545308 MSNP26038 577 aaKnown RBP2.52□□□□□ -2.01
SNHG1-222ENST00000545308 IL3RAP26951 378 aa2.52□□□□□ -2.01
SNHG1-222ENST00000545308 PSMB5P28074 263 aa2.52□□□□□ -2.01
SNHG1-222ENST00000545308 CCR7P32248 378 aa2.52□□□□□ -2.01
SNHG1-222ENST00000545308 OPRK1P41145 380 aa2.52□□□□□ -2.01
SNHG1-222ENST00000545308 EIF1P41567 113 aaKnown RBP2.52□□□□□ -2.01
SNHG1-222ENST00000545308 TSPAN5P62079 268 aa2.52□□□□□ -2.01
SNHG1-222ENST00000545308 CEACAM16Q2WEN9 425 aa2.52□□□□□ -2.01
SNHG1-222ENST00000545308 SAXO1Q8IYX7 474 aa2.52□□□□□ -2.01
SNHG1-222ENST00000545308 TMEM256Q8N2U0 113 aa2.52□□□□□ -2.01
SNHG1-222ENST00000545308 LINC00337Q8N6G1 96 aa2.52□□□□□ -2.01
SNHG1-222ENST00000545308 OR13C4Q8NGS5 318 aa2.52□□□□□ -2.01
SNHG1-222ENST00000545308 SNF8Q96H20 258 aa2.52□□□□□ -2.01
SNHG1-222ENST00000545308 PRAP1Q96NZ9 151 aa2.52□□□□□ -2.01
SNHG1-222ENST00000545308 TBL1YQ9BQ87 522 aa2.52□□□□□ -2.01
SNHG1-222ENST00000545308 DOHHQ9BU89 302 aa2.52□□□□□ -2.01
SNHG1-222ENST00000545308 PRTFDC1Q9NRG1 225 aa2.52□□□□□ -2.01
SNHG1-222ENST00000545308 MED29Q9NX70 200 aa2.52□□□□□ -2.01
SNHG1-222ENST00000545308 PAQR5Q9NXK6 330 aaPredicted RBP2.52□□□□□ -2.01
SNHG1-222ENST00000545308 LRRC42Q9Y546 428 aa2.52□□□□□ -2.01
SNHG1-222ENST00000545308 YTHDF2Q9Y5A9 579 aaKnown RBP2.52□□□□□ -2.01
SNHG1-222ENST00000545308 URGCP-MRPS24S4R325 110 aa2.52□□□□□ -2.01
SNHG1-222ENST00000545308 TENM1Q9UKZ4 2725 aa2.52□□□□□ -2.01
SNHG1-222ENST00000545308 KIR2DS1A0A191URI9 304 aa2.51□□□□□ -2.01
SNHG1-222ENST00000545308 ISPDA4D126 451 aa2.51□□□□□ -2.01
SNHG1-222ENST00000545308 E5RI56 91 aa2.51□□□□□ -2.01
SNHG1-222ENST00000545308 RBFOX2O43251 390 aaKnown RBP eCLIP2.51□□□□□ -2.01
SNHG1-222ENST00000545308 PSIP1O75475 530 aaKnown RBP2.51□□□□□ -2.01
SNHG1-222ENST00000545308 DHRS3O75911 302 aa2.51□□□□□ -2.01
SNHG1-222ENST00000545308 PROSCO94903 275 aa2.51□□□□□ -2.01
SNHG1-222ENST00000545308 TNFAIP8O95379 198 aa2.51□□□□□ -2.01
SNHG1-222ENST00000545308 RD3LP0DJH9 198 aa2.51□□□□□ -2.01
SNHG1-222ENST00000545308 ME2P23368 584 aa2.51□□□□□ -2.01
SNHG1-222ENST00000545308 PSMB2P49721 201 aa2.51□□□□□ -2.01
SNHG1-222ENST00000545308 CDK9P50750 372 aaKnown RBP2.51□□□□□ -2.01
SNHG1-222ENST00000545308 ZNF140P52738 457 aaPredicted RBP2.51□□□□□ -2.01
SNHG1-222ENST00000545308 AQP5P55064 265 aa2.51□□□□□ -2.01
SNHG1-222ENST00000545308 CTBP2P56545 445 aa2.51□□□□□ -2.01
SNHG1-222ENST00000545308 OR10A3P58181 314 aa2.51□□□□□ -2.01
SNHG1-222ENST00000545308 BTG2P78543 158 aa2.51□□□□□ -2.01
SNHG1-222ENST00000545308 PTGES3Q15185 160 aaKnown RBP2.51□□□□□ -2.01
SNHG1-222ENST00000545308 OR4D1Q15615 310 aa2.51□□□□□ -2.01
SNHG1-222ENST00000545308 BSXQ3C1V8 233 aa2.51□□□□□ -2.01
SNHG1-222ENST00000545308 TEX30Q5JUR7 227 aa2.51□□□□□ -2.01
SNHG1-222ENST00000545308 ENTHD1Q8IYW4 607 aa2.51□□□□□ -2.01
SNHG1-222ENST00000545308 ZNF567Q8N184 647 aa2.51□□□□□ -2.01
SNHG1-222ENST00000545308 CNEP1R1Q8N9A8 125 aa2.51□□□□□ -2.01
SNHG1-222ENST00000545308 OR8G5Q8NG78 346 aa2.51□□□□□ -2.01
SNHG1-222ENST00000545308 CPNE4Q96A23 557 aaPredicted RBP2.51□□□□□ -2.01
SNHG1-222ENST00000545308 STARD4Q96DR4 205 aa2.51□□□□□ -2.01
SNHG1-222ENST00000545308 MUCL1Q96DR8 90 aa2.51□□□□□ -2.01
SNHG1-222ENST00000545308 OLFM3Q96PB7 478 aa2.51□□□□□ -2.01
SNHG1-222ENST00000545308 SPACA5Q96QH8 159 aa2.51□□□□□ -2.01
SNHG1-222ENST00000545308 METTL26Q96S19 204 aa2.51□□□□□ -2.01
SNHG1-222ENST00000545308 SUCNR1Q9BXA5 334 aa2.51□□□□□ -2.01
SNHG1-222ENST00000545308 WDR55Q9H6Y2 383 aaPredicted RBP2.51□□□□□ -2.01
SNHG1-222ENST00000545308 CA10Q9NS85 328 aa2.51□□□□□ -2.01
SNHG1-222ENST00000545308 STX18Q9P2W9 335 aaKnown RBP2.51□□□□□ -2.01
SNHG1-222ENST00000545308 TAC3Q9UHF0 121 aa2.51□□□□□ -2.01
SNHG1-222ENST00000545308 SNX24Q9Y343 169 aa2.51□□□□□ -2.01
SNHG1-222ENST00000545308 ENPP4Q9Y6X5 453 aa2.51□□□□□ -2.01
SNHG1-222ENST00000545308 NBEAL2Q6ZNJ1 2754 aa2.51□□□□□ -2.01
SNHG1-222ENST00000545308 VWFP04275 2813 aa2.5□□□□□ -2.01
SNHG1-222ENST00000545308 IGKV3D-11A0A0A0MRZ8 115 aa2.5□□□□□ -2.01
SNHG1-222ENST00000545308 BTNL10A8MVZ5 291 aa2.5□□□□□ -2.01
SNHG1-222ENST00000545308 CST8O60676 142 aa2.5□□□□□ -2.01
SNHG1-222ENST00000545308 CCNKO75909 580 aa2.5□□□□□ -2.01
SNHG1-222ENST00000545308 HLA-DQB1P01920 261 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms