RNA–Protein interactions for RNA: ENST00000544584.1

CLSTN3-215, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-215ENST00000544584 OSR1Q8TAX0 266 aaPredicted RBP4.43□□□□□ -1.7
CLSTN3-215ENST00000544584 CD300LFQ8TDQ1 290 aa4.43□□□□□ -1.7
CLSTN3-215ENST00000544584 WIPF2Q8TF74 440 aaPredicted RBP4.43□□□□□ -1.7
CLSTN3-215ENST00000544584 ABHD14BQ96IU4 210 aa4.43□□□□□ -1.7
CLSTN3-215ENST00000544584 UBE2E2Q96LR5 201 aa4.43□□□□□ -1.7
CLSTN3-215ENST00000544584 HARBI1Q96MB7 349 aa4.43□□□□□ -1.7
CLSTN3-215ENST00000544584 GFI1Q99684 422 aa4.43□□□□□ -1.7
CLSTN3-215ENST00000544584 HSD17B10Q99714 261 aaKnown RBP4.43□□□□□ -1.7
CLSTN3-215ENST00000544584 AGMATQ9BSE5 352 aa4.43□□□□□ -1.7
CLSTN3-215ENST00000544584 DCUN1D5Q9BTE7 237 aa4.43□□□□□ -1.7
CLSTN3-215ENST00000544584 PARP11Q9NR21 331 aa4.43□□□□□ -1.7
CLSTN3-215ENST00000544584 ZNF355PQ9NSJ1 428 aa4.43□□□□□ -1.7
CLSTN3-215ENST00000544584 RABL2AQ9UBK7 228 aaPredicted RBP4.43□□□□□ -1.7
CLSTN3-215ENST00000544584 METTL1Q9UBP6 276 aaKnown RBP4.43□□□□□ -1.7
CLSTN3-215ENST00000544584 ADAM30Q9UKF2 790 aa4.43□□□□□ -1.7
CLSTN3-215ENST00000544584 RABL2BQ9UNT1 228 aa4.43□□□□□ -1.7
CLSTN3-215ENST00000544584 TRAV18A0A075B6X5 111 aa4.42□□□□□ -1.7
CLSTN3-215ENST00000544584 C13orf42A0A1B0GVH6 325 aa4.42□□□□□ -1.7
CLSTN3-215ENST00000544584 TMEM235A6NFC5 223 aa4.42□□□□□ -1.7
CLSTN3-215ENST00000544584 FOXI3A8MTJ6 420 aaPredicted RBP4.42□□□□□ -1.7
CLSTN3-215ENST00000544584 H0YJW9 148 aa4.42□□□□□ -1.7
CLSTN3-215ENST00000544584 CCL24O00175 119 aa4.42□□□□□ -1.7
CLSTN3-215ENST00000544584 MPPED1O15442 326 aa4.42□□□□□ -1.7
CLSTN3-215ENST00000544584 XRCC3O43542 346 aa4.42□□□□□ -1.7
CLSTN3-215ENST00000544584 TPPPO94811 219 aa4.42□□□□□ -1.7
CLSTN3-215ENST00000544584 HRASP01112 189 aa4.42□□□□□ -1.7
CLSTN3-215ENST00000544584 GSTT2P0CG29 244 aa4.42□□□□□ -1.7
CLSTN3-215ENST00000544584 GSTT2BP0CG30 244 aa4.42□□□□□ -1.7
CLSTN3-215ENST00000544584 SNRPBP14678 240 aaKnown RBP4.42□□□□□ -1.7
CLSTN3-215ENST00000544584 AADACP22760 399 aa4.42□□□□□ -1.7
CLSTN3-215ENST00000544584 RAB9AP51151 201 aa4.42□□□□□ -1.7
CLSTN3-215ENST00000544584 RAB25P57735 213 aa4.42□□□□□ -1.7
CLSTN3-215ENST00000544584 HERV-K104P61576 105 aa4.42□□□□□ -1.7
CLSTN3-215ENST00000544584 MSMO1Q15800 293 aa4.42□□□□□ -1.7
CLSTN3-215ENST00000544584 TATDN3Q17R31 274 aa4.42□□□□□ -1.7
CLSTN3-215ENST00000544584 ACTBL2Q562R1 376 aa4.42□□□□□ -1.7
CLSTN3-215ENST00000544584 RPL39P5Q59GN2 51 aa4.42□□□□□ -1.7
CLSTN3-215ENST00000544584 ZNF66Q6ZN08 573 aa4.42□□□□□ -1.7
CLSTN3-215ENST00000544584 PPP1R27Q86WC6 154 aa4.42□□□□□ -1.7
CLSTN3-215ENST00000544584 TMEM17Q86X19 198 aa4.42□□□□□ -1.7
CLSTN3-215ENST00000544584 MRPL41Q8IXM3 137 aaKnown RBP4.42□□□□□ -1.7
CLSTN3-215ENST00000544584 ODF3L1Q8IXM7 274 aa4.42□□□□□ -1.7
CLSTN3-215ENST00000544584 CMTM1Q8IZ96 169 aa4.42□□□□□ -1.7
CLSTN3-215ENST00000544584 RNF152Q8N8N0 203 aa4.42□□□□□ -1.7
CLSTN3-215ENST00000544584 TEX45Q8NA69 505 aa4.42□□□□□ -1.7
CLSTN3-215ENST00000544584 BEST4Q8NFU0 473 aa4.42□□□□□ -1.7
CLSTN3-215ENST00000544584 OR4S2Q8NH73 311 aa4.42□□□□□ -1.7
CLSTN3-215ENST00000544584 LGALS14Q8TCE9 139 aa4.42□□□□□ -1.7
CLSTN3-215ENST00000544584 C4orf3Q8WVX3 66 aa4.42□□□□□ -1.7
CLSTN3-215ENST00000544584 USMG5Q96IX5 58 aa4.42□□□□□ -1.7
CLSTN3-215ENST00000544584 NOL4LQ96MY1 436 aaPredicted RBP4.42□□□□□ -1.7
CLSTN3-215ENST00000544584 PHB2Q99623 299 aa4.42□□□□□ -1.7
CLSTN3-215ENST00000544584 SPIN2AQ99865 258 aa4.42□□□□□ -1.7
CLSTN3-215ENST00000544584 SPIN2BQ9BPZ2 258 aa4.42□□□□□ -1.7
CLSTN3-215ENST00000544584 HDHD3Q9BSH5 251 aaPredicted RBP4.42□□□□□ -1.7
CLSTN3-215ENST00000544584 ELOVL1Q9BW60 279 aa4.42□□□□□ -1.7
CLSTN3-215ENST00000544584 OR51E2Q9H255 320 aa4.42□□□□□ -1.7
CLSTN3-215ENST00000544584 KCNK15Q9H427 330 aa4.42□□□□□ -1.7
CLSTN3-215ENST00000544584 PLSCR3Q9NRY6 295 aa4.42□□□□□ -1.7
CLSTN3-215ENST00000544584 ANXA10Q9UJ72 324 aa4.42□□□□□ -1.7
CLSTN3-215ENST00000544584 FOXA2Q9Y261 457 aaPredicted RBP4.42□□□□□ -1.7
CLSTN3-215ENST00000544584 OR2W1Q9Y3N9 320 aa4.42□□□□□ -1.7
CLSTN3-215ENST00000544584 TENM3Q9P273 2699 aa4.42□□□□□ -1.7
CLSTN3-215ENST00000544584 DPPA5A6NC42 116 aa4.41□□□□□ -1.7
CLSTN3-215ENST00000544584 SH2D7A6NKC9 451 aaPredicted RBP4.41□□□□□ -1.7
CLSTN3-215ENST00000544584 TUSC2O75896 110 aa4.41□□□□□ -1.7
CLSTN3-215ENST00000544584 ZP3P21754 424 aa4.41□□□□□ -1.7
CLSTN3-215ENST00000544584 PRSS3P35030 304 aa4.41□□□□□ -1.7
CLSTN3-215ENST00000544584 MAS1LP35410 378 aa4.41□□□□□ -1.7
CLSTN3-215ENST00000544584 CRIP2P52943 208 aaPredicted RBP4.41□□□□□ -1.7
CLSTN3-215ENST00000544584 UBE2KP61086 200 aa4.41□□□□□ -1.7
CLSTN3-215ENST00000544584 ERVK-16P61578 105 aa4.41□□□□□ -1.7
CLSTN3-215ENST00000544584 TSPAN5P62079 268 aa4.41□□□□□ -1.7
CLSTN3-215ENST00000544584 GNB1P62873 340 aa4.41□□□□□ -1.7
CLSTN3-215ENST00000544584 CX3CL1P78423 397 aa4.41□□□□□ -1.7
CLSTN3-215ENST00000544584 ZNF616Q08AN1 781 aa4.41□□□□□ -1.7
CLSTN3-215ENST00000544584 FXYD3Q14802 87 aa4.41□□□□□ -1.7
CLSTN3-215ENST00000544584 PSG5Q15238 335 aa4.41□□□□□ -1.7
CLSTN3-215ENST00000544584 ECSCRQ19T08 205 aa4.41□□□□□ -1.7
CLSTN3-215ENST00000544584 ZNF260Q3ZCT1 412 aa4.41□□□□□ -1.7
CLSTN3-215ENST00000544584 IGSF11Q5DX21 431 aa4.41□□□□□ -1.7
CLSTN3-215ENST00000544584 C9orf66Q5T8R8 295 aa4.41□□□□□ -1.7
CLSTN3-215ENST00000544584 SAMD5Q5TGI4 173 aa4.41□□□□□ -1.7
CLSTN3-215ENST00000544584 UNQ5815/PRO19632Q6UWF5 114 aa4.41□□□□□ -1.7
CLSTN3-215ENST00000544584 Q6ZS46 218 aa4.41□□□□□ -1.7
CLSTN3-215ENST00000544584 LCNL1Q6ZST4 164 aa4.41□□□□□ -1.7
CLSTN3-215ENST00000544584 GPR141Q7Z602 305 aa4.41□□□□□ -1.7
CLSTN3-215ENST00000544584 ZNF429Q86V71 674 aa4.41□□□□□ -1.7
CLSTN3-215ENST00000544584 HOGA1Q86XE5 327 aa4.41□□□□□ -1.7
CLSTN3-215ENST00000544584 MMD2Q8IY49 270 aa4.41□□□□□ -1.7
CLSTN3-215ENST00000544584 H1FOOQ8IZA3 346 aaPredicted RBP4.41□□□□□ -1.7
CLSTN3-215ENST00000544584 SAMD12Q8N8I0 201 aa4.41□□□□□ -1.7
CLSTN3-215ENST00000544584 MINDY2Q8NBR6 621 aa4.41□□□□□ -1.7
CLSTN3-215ENST00000544584 OR5AP2Q8NGF4 316 aa4.41□□□□□ -1.7
CLSTN3-215ENST00000544584 OR4A5Q8NH83 315 aa4.41□□□□□ -1.7
CLSTN3-215ENST00000544584 TCTEX1D2Q8WW35 142 aa4.41□□□□□ -1.7
CLSTN3-215ENST00000544584 ARPC1AQ92747 370 aa4.41□□□□□ -1.7
CLSTN3-215ENST00000544584 SLC25A46Q96AG3 418 aa4.41□□□□□ -1.7
CLSTN3-215ENST00000544584 MRPS26Q9BYN8 205 aaKnown RBP4.41□□□□□ -1.7
CLSTN3-215ENST00000544584 FBXL15Q9H469 300 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms