RNA–Protein interactions for RNA: ENST00000544432.5

VAMP1-208, Transcript of vesicle associated membrane protein 1, human

TSL 3

Gene VAMP1, Length 759 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VAMP1-208	ENST00000544432	RAX2	Q96IS3	184 aa		10.87	□□□□□ -0.67
VAMP1-208	ENST00000544432	GINS4	Q9BRT9	223 aa		10.87	□□□□□ -0.67
VAMP1-208	ENST00000544432	RNF167	Q9H6Y7	350 aa		10.87	□□□□□ -0.67
VAMP1-208	ENST00000544432	PARP11	Q9NR21	331 aa		10.87	□□□□□ -0.67
VAMP1-208	ENST00000544432	RHBDL2	Q9NX52	303 aa		10.87	□□□□□ -0.67
VAMP1-208	ENST00000544432	ELF5	Q9UKW6	265 aa	Predicted RBP	10.87	□□□□□ -0.67
VAMP1-208	ENST00000544432	NUBP2	Q9Y5Y2	271 aa		10.87	□□□□□ -0.67
VAMP1-208	ENST00000544432	WSB1	Q9Y6I7	421 aa		10.87	□□□□□ -0.67
VAMP1-208	ENST00000544432	IGKV1D-8	A0A087WSZ0	117 aa		10.86	□□□□□ -0.67
VAMP1-208	ENST00000544432		G3V318	75 aa		10.86	□□□□□ -0.67
VAMP1-208	ENST00000544432	FCN1	O00602	326 aa		10.86	□□□□□ -0.67
VAMP1-208	ENST00000544432	TNFAIP8	O95379	198 aa		10.86	□□□□□ -0.67
VAMP1-208	ENST00000544432	EGR2	P11161	476 aa	Predicted RBP	10.86	□□□□□ -0.67
VAMP1-208	ENST00000544432	LINC00205	P59089	165 aa		10.86	□□□□□ -0.67
VAMP1-208	ENST00000544432	RPS16	P62249	146 aa	Known RBP	10.86	□□□□□ -0.67
VAMP1-208	ENST00000544432	NDP	Q00604	133 aa		10.86	□□□□□ -0.67
VAMP1-208	ENST00000544432	RUNX1	Q01196	453 aa		10.86	□□□□□ -0.67
VAMP1-208	ENST00000544432	MXD1	Q05195	221 aa		10.86	□□□□□ -0.67
VAMP1-208	ENST00000544432	EGFEM1P	Q0D2K5	195 aa		10.86	□□□□□ -0.67
VAMP1-208	ENST00000544432	TMEM267	Q0VDI3	215 aa	Predicted RBP	10.86	□□□□□ -0.67
VAMP1-208	ENST00000544432	PLGLA	Q15195	96 aa		10.86	□□□□□ -0.67
VAMP1-208	ENST00000544432	TMEM65	Q6PI78	240 aa		10.86	□□□□□ -0.67
VAMP1-208	ENST00000544432	LCNL1	Q6ZST4	164 aa		10.86	□□□□□ -0.67
VAMP1-208	ENST00000544432	CROCCP3	Q8IVE0	287 aa		10.86	□□□□□ -0.67
VAMP1-208	ENST00000544432	TSPAN14	Q8NG11	270 aa		10.86	□□□□□ -0.67
VAMP1-208	ENST00000544432	ADTRP	Q96IZ2	230 aa		10.86	□□□□□ -0.67
VAMP1-208	ENST00000544432	UBE2E2	Q96LR5	201 aa		10.86	□□□□□ -0.67
VAMP1-208	ENST00000544432	ST6GALNAC5	Q9BVH7	336 aa		10.86	□□□□□ -0.67
VAMP1-208	ENST00000544432	OR2D2	Q9H210	308 aa		10.86	□□□□□ -0.67
VAMP1-208	ENST00000544432	VCX3A	Q9NNX9	186 aa		10.86	□□□□□ -0.67
VAMP1-208	ENST00000544432	SLC35D1	Q9NTN3	355 aa		10.86	□□□□□ -0.67
VAMP1-208	ENST00000544432	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	10.86	□□□□□ -0.67
VAMP1-208	ENST00000544432	METTL1	Q9UBP6	276 aa	Known RBP	10.86	□□□□□ -0.67
VAMP1-208	ENST00000544432	TMEM235	A6NFC5	223 aa		10.85	□□□□□ -0.67
VAMP1-208	ENST00000544432	PRB2	P02812	416 aa	Predicted RBP	10.85	□□□□□ -0.67
VAMP1-208	ENST00000544432	RRAS	P10301	218 aa		10.85	□□□□□ -0.67
VAMP1-208	ENST00000544432	RAB9A	P51151	201 aa		10.85	□□□□□ -0.67
VAMP1-208	ENST00000544432	AKIRIN2	Q53H80	203 aa		10.85	□□□□□ -0.67
VAMP1-208	ENST00000544432	IDNK	Q5T6J7	187 aa		10.85	□□□□□ -0.67
VAMP1-208	ENST00000544432	CNIH2	Q6PI25	160 aa		10.85	□□□□□ -0.67
VAMP1-208	ENST00000544432	ZNF491	Q8N8L2	437 aa		10.85	□□□□□ -0.67
VAMP1-208	ENST00000544432	SLC25A38	Q96DW6	304 aa		10.85	□□□□□ -0.67
VAMP1-208	ENST00000544432	YIPF6	Q96EC8	236 aa		10.85	□□□□□ -0.67
VAMP1-208	ENST00000544432	C5orf30	Q96GV9	206 aa		10.85	□□□□□ -0.67
VAMP1-208	ENST00000544432	KLK15	Q9H2R5	256 aa		10.85	□□□□□ -0.67
VAMP1-208	ENST00000544432	SPATA2	Q9UM82	520 aa		10.85	□□□□□ -0.67
VAMP1-208	ENST00000544432	VSIG4	Q9Y279	399 aa		10.85	□□□□□ -0.67
VAMP1-208	ENST00000544432	RBM7	Q9Y580	266 aa	Known RBP	10.85	□□□□□ -0.67
VAMP1-208	ENST00000544432	TRIM64C	A6NLI5	447 aa		10.84	□□□□□ -0.67
VAMP1-208	ENST00000544432		I3L521	148 aa		10.84	□□□□□ -0.67
VAMP1-208	ENST00000544432	SSX5	O60225	188 aa		10.84	□□□□□ -0.67
VAMP1-208	ENST00000544432	SLC22A5	O76082	557 aa		10.84	□□□□□ -0.67
VAMP1-208	ENST00000544432	GNG2	P59768	71 aa		10.84	□□□□□ -0.67
VAMP1-208	ENST00000544432	FHL3	Q13643	280 aa		10.84	□□□□□ -0.67
VAMP1-208	ENST00000544432	TMEM177	Q53S58	311 aa		10.84	□□□□□ -0.67
VAMP1-208	ENST00000544432	PYHIN1	Q6K0P9	492 aa		10.84	□□□□□ -0.67
VAMP1-208	ENST00000544432	OR5H6	Q8NGV6	325 aa		10.84	□□□□□ -0.67
VAMP1-208	ENST00000544432	NUDCD2	Q8WVJ2	157 aa		10.84	□□□□□ -0.67
VAMP1-208	ENST00000544432	DPF1	Q92782	380 aa		10.84	□□□□□ -0.67
VAMP1-208	ENST00000544432	ZMAT5	Q9UDW3	170 aa	Known RBP	10.84	□□□□□ -0.67
VAMP1-208	ENST00000544432	FOXA2	Q9Y261	457 aa	Predicted RBP	10.84	□□□□□ -0.67
VAMP1-208	ENST00000544432	FBXO7	Q9Y3I1	522 aa		10.84	□□□□□ -0.67
VAMP1-208	ENST00000544432	OR2W1	Q9Y3N9	320 aa		10.84	□□□□□ -0.67
VAMP1-208	ENST00000544432	AIRE	O43918	545 aa		10.83	□□□□□ -0.68
VAMP1-208	ENST00000544432	IGLV2-23	P01705	113 aa		10.83	□□□□□ -0.68
VAMP1-208	ENST00000544432	HLA-DQB1	P01920	261 aa		10.83	□□□□□ -0.68
VAMP1-208	ENST00000544432	CRYGB	P07316	175 aa		10.83	□□□□□ -0.68
VAMP1-208	ENST00000544432	DUT	P33316	252 aa	Known RBP	10.83	□□□□□ -0.68
VAMP1-208	ENST00000544432	LUM	P51884	338 aa	Predicted RBP	10.83	□□□□□ -0.68
VAMP1-208	ENST00000544432	KRTAP10-11	P60412	298 aa		10.83	□□□□□ -0.68
VAMP1-208	ENST00000544432	CBX3	Q13185	183 aa		10.83	□□□□□ -0.68
VAMP1-208	ENST00000544432	RTL8B	Q17RB0	113 aa		10.83	□□□□□ -0.68
VAMP1-208	ENST00000544432	PPP1R27	Q86WC6	154 aa		10.83	□□□□□ -0.68
VAMP1-208	ENST00000544432	OR5M8	Q8NGP6	311 aa		10.83	□□□□□ -0.68
VAMP1-208	ENST00000544432	MRAP	Q8TCY5	172 aa		10.83	□□□□□ -0.68
VAMP1-208	ENST00000544432	DDB2	Q92466	427 aa		10.83	□□□□□ -0.68
VAMP1-208	ENST00000544432	DUX3	Q96PT4	197 aa		10.83	□□□□□ -0.68
VAMP1-208	ENST00000544432	DIABLO	Q9NR28	239 aa		10.83	□□□□□ -0.68
VAMP1-208	ENST00000544432	ANXA10	Q9UJ72	324 aa		10.83	□□□□□ -0.68
VAMP1-208	ENST00000544432	TRAV18	A0A075B6X5	111 aa		10.82	□□□□□ -0.68
VAMP1-208	ENST00000544432		A0A1W2PN81	502 aa		10.82	□□□□□ -0.68
VAMP1-208	ENST00000544432	SLC25A17	O43808	307 aa		10.82	□□□□□ -0.68
VAMP1-208	ENST00000544432	SOX15	O60248	233 aa		10.82	□□□□□ -0.68
VAMP1-208	ENST00000544432	TUSC2	O75896	110 aa		10.82	□□□□□ -0.68
VAMP1-208	ENST00000544432	CA2	P00918	260 aa		10.82	□□□□□ -0.68
VAMP1-208	ENST00000544432	CHRNA7	P36544	502 aa		10.82	□□□□□ -0.68
VAMP1-208	ENST00000544432	ECSCR	Q19T08	205 aa		10.82	□□□□□ -0.68
VAMP1-208	ENST00000544432	DEFB136	Q30KP8	78 aa		10.82	□□□□□ -0.68
VAMP1-208	ENST00000544432	ZNF645	Q8N7E2	425 aa		10.82	□□□□□ -0.68
VAMP1-208	ENST00000544432	BVES	Q8NE79	360 aa		10.82	□□□□□ -0.68
VAMP1-208	ENST00000544432	ARPC1A	Q92747	370 aa		10.82	□□□□□ -0.68
VAMP1-208	ENST00000544432	CLCC1	Q96S66	551 aa		10.82	□□□□□ -0.68
VAMP1-208	ENST00000544432	GNB4	Q9HAV0	340 aa		10.82	□□□□□ -0.68
VAMP1-208	ENST00000544432	OR8U8	P0C7N1	319 aa		10.81	□□□□□ -0.68
VAMP1-208	ENST00000544432	NFYA	P23511	347 aa	Predicted RBP	10.81	□□□□□ -0.68
VAMP1-208	ENST00000544432	RPS19	P39019	145 aa	Known RBP	10.81	□□□□□ -0.68
VAMP1-208	ENST00000544432	FXYD3	Q14802	87 aa		10.81	□□□□□ -0.68
VAMP1-208	ENST00000544432	ACTBL2	Q562R1	376 aa		10.81	□□□□□ -0.68
VAMP1-208	ENST00000544432	UNQ5815/PRO19632	Q6UWF5	114 aa		10.81	□□□□□ -0.68
VAMP1-208	ENST00000544432	HOGA1	Q86XE5	327 aa		10.81	□□□□□ -0.68

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