RNA–Protein interactions for RNA: ENST00000543988.1

OTUB1-212, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 1 (best) BASIC

Gene OTUB1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-212ENST00000543988 SNX29P2Q8IUI4 249 aa17.16■□□□□ 0.34
OTUB1-212ENST00000543988 ZNF645Q8N7E2 425 aa17.16■□□□□ 0.34
OTUB1-212ENST00000543988 NECAP2Q9NVZ3 263 aa17.16■□□□□ 0.34
OTUB1-212ENST00000543988 SCOCQ9UIL1 159 aa17.16■□□□□ 0.34
OTUB1-212ENST00000543988 CMYA5Q8N3K9 4069 aa17.16■□□□□ 0.34
OTUB1-212ENST00000543988 SMIM31A0A1B0GVY4 71 aa17.15■□□□□ 0.34
OTUB1-212ENST00000543988 OR5H8P0DN80 308 aa17.15■□□□□ 0.34
OTUB1-212ENST00000543988 AADACP22760 399 aa17.15■□□□□ 0.34
OTUB1-212ENST00000543988 FCGR2CP31995 323 aa17.15■□□□□ 0.34
OTUB1-212ENST00000543988 IGHV7-81A0A0B4J1V7 117 aa17.14■□□□□ 0.33
OTUB1-212ENST00000543988 TCRBV4S1A1TA0A5B7 111 aa17.14■□□□□ 0.33
OTUB1-212ENST00000543988 FAM25AB3EWG3 89 aa17.14■□□□□ 0.33
OTUB1-212ENST00000543988 FAM25CB3EWG5 89 aa17.14■□□□□ 0.33
OTUB1-212ENST00000543988 FAM25GB3EWG6 89 aa17.14■□□□□ 0.33
OTUB1-212ENST00000543988 IGLV2-14P01704 120 aa17.14■□□□□ 0.33
OTUB1-212ENST00000543988 OPN1MWP04001 364 aa17.14■□□□□ 0.33
OTUB1-212ENST00000543988 OPN1MW2P0DN77 364 aa17.14■□□□□ 0.33
OTUB1-212ENST00000543988 OPN1MW3P0DN78 364 aa17.14■□□□□ 0.33
OTUB1-212ENST00000543988 DUTP33316 252 aaKnown RBP17.14■□□□□ 0.33
OTUB1-212ENST00000543988 RPS16P62249 146 aaKnown RBP17.14■□□□□ 0.33
OTUB1-212ENST00000543988 PSG5Q15238 335 aa17.14■□□□□ 0.33
OTUB1-212ENST00000543988 KHDC1LQ5JSQ8 128 aa17.14■□□□□ 0.33
OTUB1-212ENST00000543988 LIN54Q6MZP7 749 aa17.14■□□□□ 0.33
OTUB1-212ENST00000543988 OR5AP2Q8NGF4 316 aa17.14■□□□□ 0.33
OTUB1-212ENST00000543988 GPX8Q8TED1 209 aa17.14■□□□□ 0.33
OTUB1-212ENST00000543988 DDB2Q92466 427 aa17.14■□□□□ 0.33
OTUB1-212ENST00000543988 ISOC1Q96CN7 298 aa17.14■□□□□ 0.33
OTUB1-212ENST00000543988 TSNAXQ99598 290 aaKnown RBP17.14■□□□□ 0.33
OTUB1-212ENST00000543988 RNF5Q99942 180 aa17.14■□□□□ 0.33
OTUB1-212ENST00000543988 LINC00473A8K010 186 aa17.13■□□□□ 0.33
OTUB1-212ENST00000543988 H3BMQ9 156 aa17.13■□□□□ 0.33
OTUB1-212ENST00000543988 NOL3O60936 208 aaKnown RBP17.13■□□□□ 0.33
OTUB1-212ENST00000543988 SPDEFO95238 335 aa17.13■□□□□ 0.33
OTUB1-212ENST00000543988 IGF1P05019 195 aa17.13■□□□□ 0.33
OTUB1-212ENST00000543988 NAT1P18440 290 aa17.13■□□□□ 0.33
OTUB1-212ENST00000543988 SLC35B1P78383 322 aa17.13■□□□□ 0.33
OTUB1-212ENST00000543988 NDPQ00604 133 aa17.13■□□□□ 0.33
OTUB1-212ENST00000543988 CDK10Q15131 360 aa17.13■□□□□ 0.33
OTUB1-212ENST00000543988 PLGLAQ15195 96 aa17.13■□□□□ 0.33
OTUB1-212ENST00000543988 RTL8BQ17RB0 113 aa17.13■□□□□ 0.33
OTUB1-212ENST00000543988 BVESQ8NE79 360 aa17.13■□□□□ 0.33
OTUB1-212ENST00000543988 DYNC2LI1Q8TCX1 351 aa17.13■□□□□ 0.33
OTUB1-212ENST00000543988 FLYWCH2Q96CP2 140 aaKnown RBP17.13■□□□□ 0.33
OTUB1-212ENST00000543988 ADTRPQ96IZ2 230 aa17.13■□□□□ 0.33
OTUB1-212ENST00000543988 MIXL1Q9H2W2 232 aa17.13■□□□□ 0.33
OTUB1-212ENST00000543988 OR51J1Q9H342 316 aa17.13■□□□□ 0.33
OTUB1-212ENST00000543988 PARP11Q9NR21 331 aa17.13■□□□□ 0.33
OTUB1-212ENST00000543988 CCDC59Q9P031 241 aaKnown RBP17.13■□□□□ 0.33
OTUB1-212ENST00000543988 METTL1Q9UBP6 276 aaKnown RBP17.13■□□□□ 0.33
OTUB1-212ENST00000543988 RBMX2Q9Y388 322 aaKnown RBP17.13■□□□□ 0.33
OTUB1-212ENST00000543988 TSSC4Q9Y5U2 329 aaPredicted RBP17.13■□□□□ 0.33
OTUB1-212ENST00000543988 FCN1O00602 326 aa17.12■□□□□ 0.33
OTUB1-212ENST00000543988 ATP6V0E1O15342 81 aa17.12■□□□□ 0.33
OTUB1-212ENST00000543988 PPYP01298 95 aa17.12■□□□□ 0.33
OTUB1-212ENST00000543988 TAGLNQ01995 201 aaKnown RBP17.12■□□□□ 0.33
OTUB1-212ENST00000543988 CFHR3Q02985 330 aa17.12■□□□□ 0.33
OTUB1-212ENST00000543988 R3HDM4Q96D70 268 aa17.12■□□□□ 0.33
OTUB1-212ENST00000543988 SCPEP1Q9HB40 452 aa17.12■□□□□ 0.33
OTUB1-212ENST00000543988 TPSG1Q9NRR2 321 aa17.12■□□□□ 0.33
OTUB1-212ENST00000543988 EHFQ9NZC4 300 aa17.12■□□□□ 0.33
OTUB1-212ENST00000543988 EXTL2Q9UBQ6 330 aa17.12■□□□□ 0.33
OTUB1-212ENST00000543988 ZNF580Q9UK33 172 aa17.12■□□□□ 0.33
OTUB1-212ENST00000543988 ADAM30Q9UKF2 790 aa17.12■□□□□ 0.33
OTUB1-212ENST00000543988 SLC25A17O43808 307 aa17.11■□□□□ 0.33
OTUB1-212ENST00000543988 SLC22A5O76082 557 aa17.11■□□□□ 0.33
OTUB1-212ENST00000543988 IGLV2-23P01705 113 aa17.11■□□□□ 0.33
OTUB1-212ENST00000543988 VDAC1P21796 283 aa17.11■□□□□ 0.33
OTUB1-212ENST00000543988 TAS2R46P59540 309 aa17.11■□□□□ 0.33
OTUB1-212ENST00000543988 LAX1Q8IWV1 398 aa17.11■□□□□ 0.33
OTUB1-212ENST00000543988 SECTM1Q8WVN6 248 aa17.11■□□□□ 0.33
OTUB1-212ENST00000543988 HARBI1Q96MB7 349 aa17.11■□□□□ 0.33
OTUB1-212ENST00000543988 CEPT1Q9Y6K0 416 aa17.11■□□□□ 0.33
OTUB1-212ENST00000543988 PMP2P02689 132 aa17.1■□□□□ 0.33
OTUB1-212ENST00000543988 RFX2P48378 723 aa17.1■□□□□ 0.33
OTUB1-212ENST00000543988 RPL30P62888 115 aaKnown RBP17.1■□□□□ 0.33
OTUB1-212ENST00000543988 CX3CL1P78423 397 aa17.1■□□□□ 0.33
OTUB1-212ENST00000543988 CBX3Q13185 183 aa17.1■□□□□ 0.33
OTUB1-212ENST00000543988 EIF4EBP1Q13541 118 aaPredicted RBP17.1■□□□□ 0.33
OTUB1-212ENST00000543988 TMEM177Q53S58 311 aa17.1■□□□□ 0.33
OTUB1-212ENST00000543988 KCTD9Q7L273 389 aa17.1■□□□□ 0.33
OTUB1-212ENST00000543988 COMMD1Q8N668 190 aa17.1■□□□□ 0.33
OTUB1-212ENST00000543988 OR5H2Q8NGV7 314 aa17.1■□□□□ 0.33
OTUB1-212ENST00000543988 CLCC1Q96S66 551 aa17.1■□□□□ 0.33
OTUB1-212ENST00000543988 GON7Q9BXV9 100 aa17.1■□□□□ 0.33
OTUB1-212ENST00000543988 FBXO7Q9Y3I1 522 aa17.1■□□□□ 0.33
OTUB1-212ENST00000543988 WSB1Q9Y6I7 421 aa17.1■□□□□ 0.33
OTUB1-212ENST00000543988 MEGF8Q7Z7M0 2845 aa17.1■□□□□ 0.33
OTUB1-212ENST00000543988 G3V318 75 aa17.09■□□□□ 0.33
OTUB1-212ENST00000543988 CTDSP2O14595 271 aa17.09■□□□□ 0.33
OTUB1-212ENST00000543988 RGS5O15539 181 aa17.09■□□□□ 0.33
OTUB1-212ENST00000543988 CRYZL1O95825 349 aa17.09■□□□□ 0.33
OTUB1-212ENST00000543988 RRASP10301 218 aa17.09■□□□□ 0.33
OTUB1-212ENST00000543988 FXYD4P59646 89 aa17.09■□□□□ 0.33
OTUB1-212ENST00000543988 RNASE12Q5GAN4 147 aaKnown RBP17.09■□□□□ 0.33
OTUB1-212ENST00000543988 OR2B11Q5JQS5 317 aa17.09■□□□□ 0.33
OTUB1-212ENST00000543988 LCNL1Q6ZST4 164 aa17.09■□□□□ 0.33
OTUB1-212ENST00000543988 OVCH2Q7RTZ1 564 aa17.09■□□□□ 0.33
OTUB1-212ENST00000543988 LYSMD2Q8IV50 215 aa17.09■□□□□ 0.33
OTUB1-212ENST00000543988 OR4F17Q8NGA8 305 aa17.09■□□□□ 0.33
OTUB1-212ENST00000543988 GIMAP1Q8WWP7 306 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms