RNA–Protein interactions for RNA: ENST00000542663.1

CLSTN3-214, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 390 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-214ENST00000542663 HDHD3Q9BSH5 251 aaPredicted RBP13.43□□□□□ -0.26
CLSTN3-214ENST00000542663 SRD5A3Q9H8P0 318 aa13.43□□□□□ -0.26
CLSTN3-214ENST00000542663 CHMP1AQ9HD42 196 aaPredicted RBP13.43□□□□□ -0.26
CLSTN3-214ENST00000542663 A0A0A6YYD4 124 aa13.42□□□□□ -0.26
CLSTN3-214ENST00000542663 TRBV6-6A0A0A6YYG2 114 aa13.42□□□□□ -0.26
CLSTN3-214ENST00000542663 IRGMA1A4Y4 181 aa13.42□□□□□ -0.26
CLSTN3-214ENST00000542663 BMPR1BO00238 502 aa13.42□□□□□ -0.26
CLSTN3-214ENST00000542663 APELAP0DMC3 54 aa13.42□□□□□ -0.26
CLSTN3-214ENST00000542663 ZBTB25P24278 435 aa13.42□□□□□ -0.26
CLSTN3-214ENST00000542663 HLA-DRB3P79483 266 aa13.42□□□□□ -0.26
CLSTN3-214ENST00000542663 USMG5Q96IX5 58 aa13.42□□□□□ -0.26
CLSTN3-214ENST00000542663 TM2D1Q9BX74 207 aa13.42□□□□□ -0.26
CLSTN3-214ENST00000542663 TMEM59Q9BXS4 323 aa13.42□□□□□ -0.26
CLSTN3-214ENST00000542663 COA4Q9NYJ1 87 aa13.42□□□□□ -0.26
CLSTN3-214ENST00000542663 PEMTQ9UBM1 199 aa13.42□□□□□ -0.26
CLSTN3-214ENST00000542663 DNAH10Q8IVF4 4471 aa13.41□□□□□ -0.26
CLSTN3-214ENST00000542663 LY6G6CO95867 125 aa13.41□□□□□ -0.26
CLSTN3-214ENST00000542663 APOA2P02652 100 aa13.41□□□□□ -0.26
CLSTN3-214ENST00000542663 SCTP09683 121 aa13.41□□□□□ -0.26
CLSTN3-214ENST00000542663 UBBP0CG47 229 aa13.41□□□□□ -0.26
CLSTN3-214ENST00000542663 EDN2P20800 178 aa13.41□□□□□ -0.26
CLSTN3-214ENST00000542663 LGALS7P47929 136 aa13.41□□□□□ -0.26
CLSTN3-214ENST00000542663 INSL4Q14641 139 aa13.41□□□□□ -0.26
CLSTN3-214ENST00000542663 ZFP1Q6P2D0 407 aa13.41□□□□□ -0.26
CLSTN3-214ENST00000542663 SNAPC3Q92966 411 aa13.41□□□□□ -0.26
CLSTN3-214ENST00000542663 TMEM80Q96HE8 168 aa13.41□□□□□ -0.26
CLSTN3-214ENST00000542663 SLC35D1Q9NTN3 355 aa13.41□□□□□ -0.26
CLSTN3-214ENST00000542663 SLC2A8Q9NY64 477 aa13.41□□□□□ -0.26
CLSTN3-214ENST00000542663 IGKV1-6A0A0C4DH72 117 aa13.4□□□□□ -0.26
CLSTN3-214ENST00000542663 OR11H12B2RN74 326 aa13.4□□□□□ -0.26
CLSTN3-214ENST00000542663 AIREO43918 545 aa13.4□□□□□ -0.26
CLSTN3-214ENST00000542663 CELP19835 753 aa13.4□□□□□ -0.26
CLSTN3-214ENST00000542663 QRFPP83859 136 aa13.4□□□□□ -0.26
CLSTN3-214ENST00000542663 C1orf100Q5SVJ3 147 aa13.4□□□□□ -0.26
CLSTN3-214ENST00000542663 ADAD2Q8NCV1 583 aaKnown RBP13.4□□□□□ -0.26
CLSTN3-214ENST00000542663 PLEKHJ1Q9NW61 149 aa13.4□□□□□ -0.26
CLSTN3-214ENST00000542663 AK3Q9UIJ7 227 aa13.4□□□□□ -0.26
CLSTN3-214ENST00000542663 ZNF221Q9UK13 617 aa13.4□□□□□ -0.26
CLSTN3-214ENST00000542663 SRRM4A7MD48 611 aaKnown RBP13.39□□□□□ -0.27
CLSTN3-214ENST00000542663 TMEM14DPA8MWL7 114 aa13.39□□□□□ -0.27
CLSTN3-214ENST00000542663 M0R1X1 148 aa13.39□□□□□ -0.27
CLSTN3-214ENST00000542663 CD1AP06126 327 aa13.39□□□□□ -0.27
CLSTN3-214ENST00000542663 TAS2R43P59537 309 aa13.39□□□□□ -0.27
CLSTN3-214ENST00000542663 DEFB114Q30KQ6 69 aa13.39□□□□□ -0.27
CLSTN3-214ENST00000542663 LRRTM1Q86UE6 522 aa13.39□□□□□ -0.27
CLSTN3-214ENST00000542663 KCNG3Q8TAE7 436 aa13.39□□□□□ -0.27
CLSTN3-214ENST00000542663 GGHQ92820 318 aa13.39□□□□□ -0.27
CLSTN3-214ENST00000542663 RIMS4Q9H426 269 aaPredicted RBP13.39□□□□□ -0.27
CLSTN3-214ENST00000542663 Q9N2K0 584 aa13.39□□□□□ -0.27
CLSTN3-214ENST00000542663 AKIP1Q9NQ31 210 aa13.39□□□□□ -0.27
CLSTN3-214ENST00000542663 ZC4H2Q9NQZ6 224 aa13.39□□□□□ -0.27
CLSTN3-214ENST00000542663 ZNF230Q9UIE0 474 aaPredicted RBP13.39□□□□□ -0.27
CLSTN3-214ENST00000542663 A0A0B4J203 849 aa13.38□□□□□ -0.27
CLSTN3-214ENST00000542663 SOCS1O15524 211 aa13.38□□□□□ -0.27
CLSTN3-214ENST00000542663 ZNF45Q02386 682 aa13.38□□□□□ -0.27
CLSTN3-214ENST00000542663 EXOSC2Q13868 293 aaKnown RBP13.38□□□□□ -0.27
CLSTN3-214ENST00000542663 C5orf30Q96GV9 206 aa13.38□□□□□ -0.27
CLSTN3-214ENST00000542663 HARBI1Q96MB7 349 aa13.38□□□□□ -0.27
CLSTN3-214ENST00000542663 LPAR5Q9H1C0 372 aa13.38□□□□□ -0.27
CLSTN3-214ENST00000542663 RDH8Q9NYR8 311 aa13.38□□□□□ -0.27
CLSTN3-214ENST00000542663 MSGN1A6NI15 193 aa13.37□□□□□ -0.27
CLSTN3-214ENST00000542663 PRH1P02810 166 aa13.37□□□□□ -0.27
CLSTN3-214ENST00000542663 OR9G9P0C7N8 305 aa13.37□□□□□ -0.27
CLSTN3-214ENST00000542663 MAPK3P27361 379 aaPredicted RBP13.37□□□□□ -0.27
CLSTN3-214ENST00000542663 RHOGP84095 191 aa13.37□□□□□ -0.27
CLSTN3-214ENST00000542663 ST3GAL4Q11206 333 aa13.37□□□□□ -0.27
CLSTN3-214ENST00000542663 MED21Q13503 144 aa13.37□□□□□ -0.27
CLSTN3-214ENST00000542663 TMEM177Q53S58 311 aa13.37□□□□□ -0.27
CLSTN3-214ENST00000542663 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.37□□□□□ -0.27
CLSTN3-214ENST00000542663 ZNF555Q8NEP9 628 aa13.37□□□□□ -0.27
CLSTN3-214ENST00000542663 WDR89Q96FK6 387 aaPredicted RBP13.37□□□□□ -0.27
CLSTN3-214ENST00000542663 PHB2Q99623 299 aa13.37□□□□□ -0.27
CLSTN3-214ENST00000542663 OVOL2Q9BRP0 275 aa13.37□□□□□ -0.27
CLSTN3-214ENST00000542663 ST6GALNAC5Q9BVH7 336 aa13.37□□□□□ -0.27
CLSTN3-214ENST00000542663 SMPD3Q9NY59 655 aaPredicted RBP13.37□□□□□ -0.27
CLSTN3-214ENST00000542663 DMRT1Q9Y5R6 373 aa13.37□□□□□ -0.27
CLSTN3-214ENST00000542663 PCLOQ9Y6V0 5065 aa13.36□□□□□ -0.27
CLSTN3-214ENST00000542663 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.36□□□□□ -0.27
CLSTN3-214ENST00000542663 TRBV9A0A0B4J1U6 114 aa13.36□□□□□ -0.27
CLSTN3-214ENST00000542663 EFCAB10A6NFE3 127 aa13.36□□□□□ -0.27
CLSTN3-214ENST00000542663 FOXI3A8MTJ6 420 aaPredicted RBP13.36□□□□□ -0.27
CLSTN3-214ENST00000542663 CD37P11049 281 aa13.36□□□□□ -0.27
CLSTN3-214ENST00000542663 KIR2DS2P43631 304 aa13.36□□□□□ -0.27
CLSTN3-214ENST00000542663 EWSR1Q01844 656 aaKnown RBP eCLIP13.36□□□□□ -0.27
CLSTN3-214ENST00000542663 GUCA2BQ16661 112 aa13.36□□□□□ -0.27
CLSTN3-214ENST00000542663 FAM89BQ8N5H3 189 aa13.36□□□□□ -0.27
CLSTN3-214ENST00000542663 DYNLRB2Q8TF09 96 aa13.36□□□□□ -0.27
CLSTN3-214ENST00000542663 THRSPQ92748 146 aa13.36□□□□□ -0.27
CLSTN3-214ENST00000542663 SDHAF2Q9NX18 166 aa13.36□□□□□ -0.27
CLSTN3-214ENST00000542663 MGAT4AQ9UM21 535 aa13.36□□□□□ -0.27
CLSTN3-214ENST00000542663 C2orf70A6NJV1 201 aa13.35□□□□□ -0.27
CLSTN3-214ENST00000542663 FAM223BA6NKX1 122 aa13.35□□□□□ -0.27
CLSTN3-214ENST00000542663 FOLR2P14207 255 aa13.35□□□□□ -0.27
CLSTN3-214ENST00000542663 TMEM50BP56557 158 aa13.35□□□□□ -0.27
CLSTN3-214ENST00000542663 WNT4P56705 351 aa13.35□□□□□ -0.27
CLSTN3-214ENST00000542663 PMS2P11Q13670 270 aa13.35□□□□□ -0.27
CLSTN3-214ENST00000542663 GLT8D1Q68CQ7 371 aa13.35□□□□□ -0.27
CLSTN3-214ENST00000542663 FAM223AQ8IWN6 122 aa13.35□□□□□ -0.27
CLSTN3-214ENST00000542663 SRSF12Q8WXF0 261 aaKnown RBP13.35□□□□□ -0.27
CLSTN3-214ENST00000542663 C12orf4Q9NQ89 552 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 150.8 ms