RNA–Protein interactions for RNA: ENST00000541640.5

PRKAB1-206, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAB1, Length 2,303 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-206ENST00000541640 TMEM147Q9BVK8 224 aa11.06□□□□□ -0.64
PRKAB1-206ENST00000541640 CLN8Q9UBY8 286 aa11.06□□□□□ -0.64
PRKAB1-206ENST00000541640 WASF3Q9UPY6 502 aa11.06□□□□□ -0.64
PRKAB1-206ENST00000541640 CEP250Q9BV73 2442 aa11.05□□□□□ -0.64
PRKAB1-206ENST00000541640 MAP1LC3B2A6NCE7 125 aa11.05□□□□□ -0.64
PRKAB1-206ENST00000541640 ZNF727A8MUV8 499 aa11.05□□□□□ -0.64
PRKAB1-206ENST00000541640 ST8SIA5O15466 376 aa11.05□□□□□ -0.64
PRKAB1-206ENST00000541640 IFNA17P01571 189 aa11.05□□□□□ -0.64
PRKAB1-206ENST00000541640 S100A8P05109 93 aa11.05□□□□□ -0.64
PRKAB1-206ENST00000541640 EGR1P18146 543 aa11.05□□□□□ -0.64
PRKAB1-206ENST00000541640 EIF2S3P41091 472 aaKnown RBP11.05□□□□□ -0.64
PRKAB1-206ENST00000541640 FGF8P55075 233 aaPredicted RBP11.05□□□□□ -0.64
PRKAB1-206ENST00000541640 CR1LQ2VPA4 569 aa11.05□□□□□ -0.64
PRKAB1-206ENST00000541640 Q3ZCU0 254 aa11.05□□□□□ -0.64
PRKAB1-206ENST00000541640 RFESDQ8TAC1 157 aa11.05□□□□□ -0.64
PRKAB1-206ENST00000541640 CA5BP1Q8WTZ4 195 aa11.05□□□□□ -0.64
PRKAB1-206ENST00000541640 EDARADDQ8WWZ3 215 aa11.05□□□□□ -0.64
PRKAB1-206ENST00000541640 MAP1LC3BQ9GZQ8 125 aa11.05□□□□□ -0.64
PRKAB1-206ENST00000541640 PSG11Q9UQ72 335 aa11.05□□□□□ -0.64
PRKAB1-206ENST00000541640 IGKV1D-17A0A075B6S4 117 aa11.04□□□□□ -0.64
PRKAB1-206ENST00000541640 ZG16O60844 167 aa11.04□□□□□ -0.64
PRKAB1-206ENST00000541640 GZMHP20718 246 aa11.04□□□□□ -0.64
PRKAB1-206ENST00000541640 ELLP55199 621 aaPredicted RBP11.04□□□□□ -0.64
PRKAB1-206ENST00000541640 OR2B8PP59922 312 aa11.04□□□□□ -0.64
PRKAB1-206ENST00000541640 RAB11AP62491 216 aa11.04□□□□□ -0.64
PRKAB1-206ENST00000541640 S100A12P80511 92 aa11.04□□□□□ -0.64
PRKAB1-206ENST00000541640 PNRC1Q12796 327 aaPredicted RBP11.04□□□□□ -0.64
PRKAB1-206ENST00000541640 MSMPQ1L6U9 139 aa11.04□□□□□ -0.64
PRKAB1-206ENST00000541640 DCTN5Q9BTE1 182 aa11.04□□□□□ -0.64
PRKAB1-206ENST00000541640 VAX2Q9UIW0 290 aa11.04□□□□□ -0.64
PRKAB1-206ENST00000541640 DEFB108AA8MXU0 73 aa11.04□□□□□ -0.64
PRKAB1-206ENST00000541640 IFNA1P01562 189 aa11.04□□□□□ -0.64
PRKAB1-206ENST00000541640 CD55P08174 381 aa11.04□□□□□ -0.64
PRKAB1-206ENST00000541640 ELOBQ15370 118 aa11.04□□□□□ -0.64
PRKAB1-206ENST00000541640 VWC2Q2TAL6 325 aa11.04□□□□□ -0.64
PRKAB1-206ENST00000541640 IGFL3Q6UXB1 125 aa11.04□□□□□ -0.64
PRKAB1-206ENST00000541640 RPP25LQ8N5L8 163 aaKnown RBP11.04□□□□□ -0.64
PRKAB1-206ENST00000541640 OR10P1Q8NGE3 313 aa11.04□□□□□ -0.64
PRKAB1-206ENST00000541640 SNX22Q96L94 193 aa11.04□□□□□ -0.64
PRKAB1-206ENST00000541640 JPT1Q9UK76 154 aa11.04□□□□□ -0.64
PRKAB1-206ENST00000541640 INTS1Q8N201 2190 aaKnown RBP11.04□□□□□ -0.64
PRKAB1-206ENST00000541640 MARCH11A6NNE9 402 aa11.03□□□□□ -0.64
PRKAB1-206ENST00000541640 LINC00587B1AMM8 73 aa11.03□□□□□ -0.64
PRKAB1-206ENST00000541640 IGKV1D-33P01593 117 aa11.03□□□□□ -0.64
PRKAB1-206ENST00000541640 IGKV1-33P01594 117 aa11.03□□□□□ -0.64
PRKAB1-206ENST00000541640 IGHV3-13P01766 116 aa11.03□□□□□ -0.64
PRKAB1-206ENST00000541640 FABP9Q0Z7S8 132 aa11.03□□□□□ -0.64
PRKAB1-206ENST00000541640 EDDM3AQ14507 147 aa11.03□□□□□ -0.64
PRKAB1-206ENST00000541640 C3orf36Q3SXR2 165 aa11.03□□□□□ -0.64
PRKAB1-206ENST00000541640 TIMM23BQ5SRD1 257 aa11.03□□□□□ -0.64
PRKAB1-206ENST00000541640 LRP11Q86VZ4 500 aa11.03□□□□□ -0.64
PRKAB1-206ENST00000541640 PPP1R35Q8TAP8 253 aa11.03□□□□□ -0.64
PRKAB1-206ENST00000541640 ZDHHC16Q969W1 377 aa11.03□□□□□ -0.64
PRKAB1-206ENST00000541640 SLC39A9Q9NUM3 307 aa11.03□□□□□ -0.64
PRKAB1-206ENST00000541640 MGST3O14880 152 aa11.03□□□□□ -0.64
PRKAB1-206ENST00000541640 MBP02144 154 aa11.03□□□□□ -0.64
PRKAB1-206ENST00000541640 DUTP33316 252 aaKnown RBP11.03□□□□□ -0.64
PRKAB1-206ENST00000541640 AARDQ4LEZ3 155 aa11.03□□□□□ -0.64
PRKAB1-206ENST00000541640 MORN2Q502X0 79 aa11.03□□□□□ -0.64
PRKAB1-206ENST00000541640 ACSM6Q6P461 480 aa11.03□□□□□ -0.64
PRKAB1-206ENST00000541640 GCSAMQ8N6F7 178 aa11.03□□□□□ -0.64
PRKAB1-206ENST00000541640 Q8WTZ3 238 aa11.03□□□□□ -0.64
PRKAB1-206ENST00000541640 LHX4Q969G2 390 aa11.03□□□□□ -0.64
PRKAB1-206ENST00000541640 FAM90A9PA6NNJ1 464 aa11.02□□□□□ -0.64
PRKAB1-206ENST00000541640 AP4M1O00189 453 aa11.02□□□□□ -0.64
PRKAB1-206ENST00000541640 ATXN7O15265 892 aaPredicted RBP11.02□□□□□ -0.64
PRKAB1-206ENST00000541640 YPEL1O60688 119 aa11.02□□□□□ -0.64
PRKAB1-206ENST00000541640 PROP1O75360 226 aa11.02□□□□□ -0.64
PRKAB1-206ENST00000541640 SMIM6P0DI80 62 aa11.02□□□□□ -0.64
PRKAB1-206ENST00000541640 MDKP21741 143 aaPredicted RBP11.02□□□□□ -0.64
PRKAB1-206ENST00000541640 GPR12P47775 334 aa11.02□□□□□ -0.64
PRKAB1-206ENST00000541640 ZNF83P51522 516 aa11.02□□□□□ -0.64
PRKAB1-206ENST00000541640 LINC00205P59089 165 aa11.02□□□□□ -0.64
PRKAB1-206ENST00000541640 GNB2P62879 340 aa11.02□□□□□ -0.64
PRKAB1-206ENST00000541640 NCR3LG1Q68D85 454 aa11.02□□□□□ -0.64
PRKAB1-206ENST00000541640 RBMS3Q6XE24 437 aaKnown RBP11.02□□□□□ -0.64
PRKAB1-206ENST00000541640 R3HDM4Q96D70 268 aa11.02□□□□□ -0.64
PRKAB1-206ENST00000541640 YPEL2Q96QA6 119 aa11.02□□□□□ -0.64
PRKAB1-206ENST00000541640 TMEM242Q9NWH2 141 aa11.02□□□□□ -0.64
PRKAB1-206ENST00000541640 DUSP13Q9UII6 198 aa11.02□□□□□ -0.64
PRKAB1-206ENST00000541640 CTXND1A0A1B0GTU2 59 aa11.02□□□□□ -0.65
PRKAB1-206ENST00000541640 CEBPZOSA8MTT3 80 aa11.02□□□□□ -0.65
PRKAB1-206ENST00000541640 CXCL1P09341 107 aa11.02□□□□□ -0.65
PRKAB1-206ENST00000541640 FGF7P21781 194 aa11.02□□□□□ -0.65
PRKAB1-206ENST00000541640 RPS10P46783 165 aaKnown RBP11.02□□□□□ -0.65
PRKAB1-206ENST00000541640 ERVFRD-1P60508 538 aa11.02□□□□□ -0.65
PRKAB1-206ENST00000541640 ZNF343Q6P1L6 599 aa11.02□□□□□ -0.65
PRKAB1-206ENST00000541640 ZNF474Q6S9Z5 364 aaPredicted RBP11.02□□□□□ -0.65
PRKAB1-206ENST00000541640 NANPQ8TBE9 248 aa11.02□□□□□ -0.65
PRKAB1-206ENST00000541640 S100PBPQ96BU1 408 aa11.02□□□□□ -0.65
PRKAB1-206ENST00000541640 SDF2L1Q9HCN8 221 aa11.02□□□□□ -0.65
PRKAB1-206ENST00000541640 FAM215AQ9Y5M1 114 aa11.02□□□□□ -0.65
PRKAB1-206ENST00000541640 URB1O60287 2271 aaKnown RBP11.02□□□□□ -0.65
PRKAB1-206ENST00000541640 USF3Q68DE3 2245 aa11.01□□□□□ -0.65
PRKAB1-206ENST00000541640 PRR14LQ5THK1 2151 aa11.01□□□□□ -0.65
PRKAB1-206ENST00000541640 M0R1B8 84 aa11.01□□□□□ -0.65
PRKAB1-206ENST00000541640 F2RL2O00254 374 aa11.01□□□□□ -0.65
PRKAB1-206ENST00000541640 RBMXL2O75526 392 aaKnown RBP11.01□□□□□ -0.65
PRKAB1-206ENST00000541640 LY86O95711 162 aa11.01□□□□□ -0.65
PRKAB1-206ENST00000541640 HPRT1P00492 218 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms