RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 PVALBP20472 110 aaPredicted RBP3.21□□□□□ -1.9
YBX3-210ENST00000540975 CDKN2BP42772 138 aa3.21□□□□□ -1.9
YBX3-210ENST00000540975 CX3CR1P49238 355 aa3.21□□□□□ -1.9
YBX3-210ENST00000540975 TCTAP57738 103 aa3.21□□□□□ -1.9
YBX3-210ENST00000540975 SNRPD2P62316 118 aaKnown RBP3.21□□□□□ -1.9
YBX3-210ENST00000540975 HBA1P69905 142 aa3.21□□□□□ -1.9
YBX3-210ENST00000540975 CDK5Q00535 292 aa3.21□□□□□ -1.9
YBX3-210ENST00000540975 BAXQ07812 192 aa3.21□□□□□ -1.9
YBX3-210ENST00000540975 TBC1D28Q2M2D7 210 aa3.21□□□□□ -1.9
YBX3-210ENST00000540975 PYCR3Q53H96 274 aa3.21□□□□□ -1.9
YBX3-210ENST00000540975 PYY3Q5JQD4 70 aa3.21□□□□□ -1.9
YBX3-210ENST00000540975 OR10J3Q5JRS4 329 aa3.21□□□□□ -1.9
YBX3-210ENST00000540975 LAIR2Q6ISS4 152 aa3.21□□□□□ -1.9
YBX3-210ENST00000540975 Q6ZSR3 168 aa3.21□□□□□ -1.9
YBX3-210ENST00000540975 FAM183BPQ6ZVS7 135 aa3.21□□□□□ -1.9
YBX3-210ENST00000540975 DEFB128Q7Z7B8 93 aa3.21□□□□□ -1.9
YBX3-210ENST00000540975 LRRC25Q8N386 305 aaPredicted RBP3.21□□□□□ -1.9
YBX3-210ENST00000540975 CBR4Q8N4T8 237 aa3.21□□□□□ -1.9
YBX3-210ENST00000540975 GPR32P1Q8NGA4 272 aa3.21□□□□□ -1.9
YBX3-210ENST00000540975 OR4F6Q8NGB9 312 aa3.21□□□□□ -1.9
YBX3-210ENST00000540975 OR52E4Q8NGH9 312 aa3.21□□□□□ -1.9
YBX3-210ENST00000540975 OR2G3Q8NGZ4 309 aa3.21□□□□□ -1.9
YBX3-210ENST00000540975 MCFD2Q8NI22 146 aa3.21□□□□□ -1.9
YBX3-210ENST00000540975 HAVCR2Q8TDQ0 301 aa3.21□□□□□ -1.9
YBX3-210ENST00000540975 Q8WTZ3 238 aa3.21□□□□□ -1.9
YBX3-210ENST00000540975 FRZBQ92765 325 aa3.21□□□□□ -1.9
YBX3-210ENST00000540975 HIST1H2BAQ96A08 127 aa3.21□□□□□ -1.9
YBX3-210ENST00000540975 ROPN1LQ96C74 230 aa3.21□□□□□ -1.9
YBX3-210ENST00000540975 OXGR1Q96P68 337 aa3.21□□□□□ -1.9
YBX3-210ENST00000540975 C20orf144Q9BQM9 153 aa3.21□□□□□ -1.9
YBX3-210ENST00000540975 SULT4A1Q9BR01 284 aa3.21□□□□□ -1.9
YBX3-210ENST00000540975 DEFB129Q9H1M3 183 aa3.21□□□□□ -1.9
YBX3-210ENST00000540975 ABCG5Q9H222 651 aa3.21□□□□□ -1.9
YBX3-210ENST00000540975 CST9LQ9H4G1 147 aa3.21□□□□□ -1.9
YBX3-210ENST00000540975 RNF122Q9H9V4 155 aa3.21□□□□□ -1.9
YBX3-210ENST00000540975 YARS2Q9Y2Z4 477 aaKnown RBP3.21□□□□□ -1.9
YBX3-210ENST00000540975 SIGLEC9Q9Y336 463 aa3.21□□□□□ -1.9
YBX3-210ENST00000540975 PAPPAQ13219 1627 aa3.21□□□□□ -1.9
YBX3-210ENST00000540975 PIKFYVEQ9Y2I7 2098 aa3.21□□□□□ -1.9
YBX3-210ENST00000540975 TET2Q6N021 2002 aaPredicted RBP3.2□□□□□ -1.9
YBX3-210ENST00000540975 PTPRJQ12913 1337 aa3.2□□□□□ -1.9
YBX3-210ENST00000540975 CDK5RAP2Q96SN8 1893 aa3.2□□□□□ -1.9
YBX3-210ENST00000540975 MYH9P35579 1960 aaKnown RBP3.2□□□□□ -1.9
YBX3-210ENST00000540975 COL24A1Q17RW2 1714 aa3.2□□□□□ -1.9
YBX3-210ENST00000540975 DDX60LQ5H9U9 1706 aaKnown RBP3.2□□□□□ -1.9
YBX3-210ENST00000540975 DOT1LQ8TEK3 1739 aa3.2□□□□□ -1.9
YBX3-210ENST00000540975 IGKV1D-17A0A075B6S4 117 aa3.2□□□□□ -1.9
YBX3-210ENST00000540975 A0A0A6YYD5 115 aa3.2□□□□□ -1.9
YBX3-210ENST00000540975 PLAC8L1A1L4L8 177 aa3.2□□□□□ -1.9
YBX3-210ENST00000540975 CORTO00230 105 aa3.2□□□□□ -1.9
YBX3-210ENST00000540975 SIRPB1O00241 398 aa3.2□□□□□ -1.9
YBX3-210ENST00000540975 MANBAO00462 879 aa3.2□□□□□ -1.9
YBX3-210ENST00000540975 ORC5O43913 435 aa3.2□□□□□ -1.9
YBX3-210ENST00000540975 MRPS14O60783 128 aaKnown RBP3.2□□□□□ -1.9
YBX3-210ENST00000540975 STK16O75716 305 aa3.2□□□□□ -1.9
YBX3-210ENST00000540975 CNMDO75829 334 aa3.2□□□□□ -1.9
YBX3-210ENST00000540975 CDS2O95674 445 aa3.2□□□□□ -1.9
YBX3-210ENST00000540975 IGHV2-5P01817 119 aa3.2□□□□□ -1.9
YBX3-210ENST00000540975 MPC1LP0DKB6 136 aa3.2□□□□□ -1.9
YBX3-210ENST00000540975 CYBAP13498 195 aa3.2□□□□□ -1.9
YBX3-210ENST00000540975 HIST1H1TP22492 207 aaPredicted RBP3.2□□□□□ -1.9
YBX3-210ENST00000540975 GRPRP30550 384 aa3.2□□□□□ -1.9
YBX3-210ENST00000540975 SULT1A1P50225 295 aa3.2□□□□□ -1.9
YBX3-210ENST00000540975 SULT1A2P50226 295 aa3.2□□□□□ -1.9
YBX3-210ENST00000540975 NUDT2P50583 147 aa3.2□□□□□ -1.9
YBX3-210ENST00000540975 STC1P52823 247 aa3.2□□□□□ -1.9
YBX3-210ENST00000540975 CRISP1P54107 249 aa3.2□□□□□ -1.9
YBX3-210ENST00000540975 ARPP19P56211 112 aa3.2□□□□□ -1.9
YBX3-210ENST00000540975 PIGPP57054 158 aa3.2□□□□□ -1.9
YBX3-210ENST00000540975 NCS1P62166 190 aa3.2□□□□□ -1.9
YBX3-210ENST00000540975 RHOBP62745 196 aa3.2□□□□□ -1.9
YBX3-210ENST00000540975 MXD1Q05195 221 aa3.2□□□□□ -1.9
YBX3-210ENST00000540975 FABP9Q0Z7S8 132 aa3.2□□□□□ -1.9
YBX3-210ENST00000540975 TAL2Q16559 108 aa3.2□□□□□ -1.9
YBX3-210ENST00000540975 LTC4SQ16873 150 aa3.2□□□□□ -1.9
YBX3-210ENST00000540975 ZNF404Q494X3 552 aa3.2□□□□□ -1.9
YBX3-210ENST00000540975 TMEM97Q5BJF2 176 aa3.2□□□□□ -1.9
YBX3-210ENST00000540975 TMEM78Q5T7P6 136 aa3.2□□□□□ -1.9
YBX3-210ENST00000540975 CPTPQ5TA50 214 aa3.2□□□□□ -1.9
YBX3-210ENST00000540975 CST9Q5W186 159 aa3.2□□□□□ -1.9
YBX3-210ENST00000540975 LCN12Q6JVE5 192 aa3.2□□□□□ -1.9
YBX3-210ENST00000540975 LYPD2Q6UXB3 125 aa3.2□□□□□ -1.9
YBX3-210ENST00000540975 NAA40Q86UY6 237 aa3.2□□□□□ -1.9
YBX3-210ENST00000540975 PDZD9Q8IXQ8 264 aa3.2□□□□□ -1.9
YBX3-210ENST00000540975 ZNF709Q8N972 641 aa3.2□□□□□ -1.9
YBX3-210ENST00000540975 SLC30A7Q8NEW0 376 aa3.2□□□□□ -1.9
YBX3-210ENST00000540975 OR4D11Q8NGI4 311 aa3.2□□□□□ -1.9
YBX3-210ENST00000540975 SPPL2BQ8TCT7 592 aa3.2□□□□□ -1.9
YBX3-210ENST00000540975 OR8D1Q8WZ84 308 aa3.2□□□□□ -1.9
YBX3-210ENST00000540975 PIK3IP1Q96FE7 263 aa3.2□□□□□ -1.9
YBX3-210ENST00000540975 SMIM8Q96KF7 97 aa3.2□□□□□ -1.9
YBX3-210ENST00000540975 HYLS1Q96M11 299 aa3.2□□□□□ -1.9
YBX3-210ENST00000540975 ZNF488Q96MN9 340 aa3.2□□□□□ -1.9
YBX3-210ENST00000540975 RBP7Q96R05 134 aa3.2□□□□□ -1.9
YBX3-210ENST00000540975 GINS3Q9BRX5 216 aa3.2□□□□□ -1.9
YBX3-210ENST00000540975 LXNQ9BS40 222 aa3.2□□□□□ -1.9
YBX3-210ENST00000540975 MARVELD1Q9BSK0 173 aa3.2□□□□□ -1.9
YBX3-210ENST00000540975 NKX6-2Q9C056 277 aaPredicted RBP3.2□□□□□ -1.9
YBX3-210ENST00000540975 ACTR3CQ9C0K3 210 aaPredicted RBP3.2□□□□□ -1.9
YBX3-210ENST00000540975 MAP1LC3AQ9H492 121 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms