RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 ZNF680Q8NEM1 530 aa6.9□□□□□ -1.3
CHD4-208ENST00000540960 OR11H4Q8NGC9 324 aa6.9□□□□□ -1.3
CHD4-208ENST00000540960 RNASE11Q8TAA1 199 aaKnown RBP6.9□□□□□ -1.3
CHD4-208ENST00000540960 PLPPR1Q8TBJ4 325 aa6.9□□□□□ -1.3
CHD4-208ENST00000540960 GLYATL2Q8WU03 294 aa6.9□□□□□ -1.3
CHD4-208ENST00000540960 NEU4Q8WWR8 484 aaPredicted RBP6.9□□□□□ -1.3
CHD4-208ENST00000540960 DCUN1D4Q92564 292 aa6.9□□□□□ -1.3
CHD4-208ENST00000540960 TIMD4Q96H15 378 aa6.9□□□□□ -1.3
CHD4-208ENST00000540960 SEC22AQ96IW7 307 aa6.9□□□□□ -1.3
CHD4-208ENST00000540960 AQP10Q96PS8 301 aa6.9□□□□□ -1.3
CHD4-208ENST00000540960 SLC25A31Q9H0C2 315 aa6.9□□□□□ -1.3
CHD4-208ENST00000540960 LINC00574Q9H8X3 128 aa6.9□□□□□ -1.3
CHD4-208ENST00000540960 OR2S2Q9NQN1 319 aa6.9□□□□□ -1.3
CHD4-208ENST00000540960 GNG12Q9UBI6 72 aa6.9□□□□□ -1.3
CHD4-208ENST00000540960 PPIAL4AQ9Y536 164 aa6.9□□□□□ -1.3
CHD4-208ENST00000540960 ARFGEF3Q5TH69 2177 aa6.89□□□□□ -1.31
CHD4-208ENST00000540960 IGKV1D-17A0A075B6S4 117 aa6.89□□□□□ -1.31
CHD4-208ENST00000540960 TRBV23-1A0A0A0MS06 115 aa6.89□□□□□ -1.31
CHD4-208ENST00000540960 BORCS7-ASMTA0A0B4J1R7 106 aa6.89□□□□□ -1.31
CHD4-208ENST00000540960 IGKV1-6A0A0C4DH72 117 aa6.89□□□□□ -1.31
CHD4-208ENST00000540960 KBTBD11-OT1A0A1B0GTJ5 212 aa6.89□□□□□ -1.31
CHD4-208ENST00000540960 hCG_1809904A0A1W2PP81 198 aa6.89□□□□□ -1.31
CHD4-208ENST00000540960 A0A1W2PPE2 198 aa6.89□□□□□ -1.31
CHD4-208ENST00000540960 A0A1W2PR64 198 aa6.89□□□□□ -1.31
CHD4-208ENST00000540960 A0A1W2PRV1 198 aa6.89□□□□□ -1.31
CHD4-208ENST00000540960 SHISA9B4DS77 424 aa6.89□□□□□ -1.31
CHD4-208ENST00000540960 FAM90A26D6RGX4 464 aa6.89□□□□□ -1.31
CHD4-208ENST00000540960 G3V4G9 280 aa6.89□□□□□ -1.31
CHD4-208ENST00000540960 TMEM178BH3BS89 294 aa6.89□□□□□ -1.31
CHD4-208ENST00000540960 K7EPK0 472 aa6.89□□□□□ -1.31
CHD4-208ENST00000540960 F2RL2O00254 374 aa6.89□□□□□ -1.31
CHD4-208ENST00000540960 WRBO00258 174 aa6.89□□□□□ -1.31
CHD4-208ENST00000540960 HSD17B6O14756 317 aa6.89□□□□□ -1.31
CHD4-208ENST00000540960 WNT9BO14905 357 aa6.89□□□□□ -1.31
CHD4-208ENST00000540960 NDUFB3O43676 98 aa6.89□□□□□ -1.31
CHD4-208ENST00000540960 PSPNO60542 156 aa6.89□□□□□ -1.31
CHD4-208ENST00000540960 MED6O75586 246 aa6.89□□□□□ -1.31
CHD4-208ENST00000540960 TPT1P13693 172 aaKnown RBP6.89□□□□□ -1.31
CHD4-208ENST00000540960 VAMP2P63027 116 aa6.89□□□□□ -1.31
CHD4-208ENST00000540960 IFITM2Q01629 132 aa6.89□□□□□ -1.31
CHD4-208ENST00000540960 HERPUD1Q15011 391 aa6.89□□□□□ -1.31
CHD4-208ENST00000540960 TMEM268Q5VZI3 342 aa6.89□□□□□ -1.31
CHD4-208ENST00000540960 ZNF788Q6ZQV5 615 aa6.89□□□□□ -1.31
CHD4-208ENST00000540960 MUC15Q8N387 334 aa6.89□□□□□ -1.31
CHD4-208ENST00000540960 CD177Q8N6Q3 437 aa6.89□□□□□ -1.31
CHD4-208ENST00000540960 MRAPQ8TCY5 172 aa6.89□□□□□ -1.31
CHD4-208ENST00000540960 SCARB1Q8WTV0 552 aa6.89□□□□□ -1.31
CHD4-208ENST00000540960 CCL28Q9NRJ3 127 aa6.89□□□□□ -1.31
CHD4-208ENST00000540960 TMEM106BQ9NUM4 274 aa6.89□□□□□ -1.31
CHD4-208ENST00000540960 ZNF581Q9P0T4 197 aa6.89□□□□□ -1.31
CHD4-208ENST00000540960 KAAG1Q9UBP8 84 aa6.89□□□□□ -1.31
CHD4-208ENST00000540960 CLN8Q9UBY8 286 aa6.89□□□□□ -1.31
CHD4-208ENST00000540960 PRELID3BQ9Y3B1 194 aa6.89□□□□□ -1.31
CHD4-208ENST00000540960 IGHV1-69-2A0A0G2JMI3 117 aa6.88□□□□□ -1.31
CHD4-208ENST00000540960 FAM90A9PA6NNJ1 464 aa6.88□□□□□ -1.31
CHD4-208ENST00000540960 E7EQL1 145 aa6.88□□□□□ -1.31
CHD4-208ENST00000540960 F5H0A9 414 aaPredicted RBP6.88□□□□□ -1.31
CHD4-208ENST00000540960 G3V3Q6 166 aa6.88□□□□□ -1.31
CHD4-208ENST00000540960 CCSO14618 274 aa6.88□□□□□ -1.31
CHD4-208ENST00000540960 RBFOX2O43251 390 aaKnown RBP eCLIP6.88□□□□□ -1.31
CHD4-208ENST00000540960 DEDDO75618 318 aa6.88□□□□□ -1.31
CHD4-208ENST00000540960 JTBO76095 146 aa6.88□□□□□ -1.31
CHD4-208ENST00000540960 OR8U9P0C7N5 309 aa6.88□□□□□ -1.31
CHD4-208ENST00000540960 CXCL2P19875 107 aa6.88□□□□□ -1.31
CHD4-208ENST00000540960 EPHA1P21709 976 aa6.88□□□□□ -1.31
CHD4-208ENST00000540960 NKX2-1P43699 371 aaPredicted RBP6.88□□□□□ -1.31
CHD4-208ENST00000540960 GPR12P47775 334 aa6.88□□□□□ -1.31
CHD4-208ENST00000540960 P2RY1P47900 373 aa6.88□□□□□ -1.31
CHD4-208ENST00000540960 EDDM3BP56851 147 aa6.88□□□□□ -1.31
CHD4-208ENST00000540960 S100A10P60903 97 aa6.88□□□□□ -1.31
CHD4-208ENST00000540960 IL15RAQ13261 267 aa6.88□□□□□ -1.31
CHD4-208ENST00000540960 EDDM3AQ14507 147 aa6.88□□□□□ -1.31
CHD4-208ENST00000540960 MSMPQ1L6U9 139 aa6.88□□□□□ -1.31
CHD4-208ENST00000540960 C2orf68Q2NKX9 166 aa6.88□□□□□ -1.31
CHD4-208ENST00000540960 LRRC37A5PQ49AS3 106 aa6.88□□□□□ -1.31
CHD4-208ENST00000540960 CLLU1Q5K131 121 aa6.88□□□□□ -1.31
CHD4-208ENST00000540960 ZNF818PQ6ZRF7 136 aa6.88□□□□□ -1.31
CHD4-208ENST00000540960 C1orf229Q6ZS94 237 aaPredicted RBP6.88□□□□□ -1.31
CHD4-208ENST00000540960 PRR18Q8N4B5 295 aa6.88□□□□□ -1.31
CHD4-208ENST00000540960 OR8U1Q8NH10 309 aa6.88□□□□□ -1.31
CHD4-208ENST00000540960 MRGPRDQ8TDS7 321 aa6.88□□□□□ -1.31
CHD4-208ENST00000540960 ZDHHC16Q969W1 377 aa6.88□□□□□ -1.31
CHD4-208ENST00000540960 COQ2Q96H96 371 aa6.88□□□□□ -1.31
CHD4-208ENST00000540960 WWC2-AS2Q96NR7 200 aa6.88□□□□□ -1.31
CHD4-208ENST00000540960 DUX5Q96PT3 197 aa6.88□□□□□ -1.31
CHD4-208ENST00000540960 JMJD8Q96S16 334 aa6.88□□□□□ -1.31
CHD4-208ENST00000540960 RAB40CQ96S21 281 aa6.88□□□□□ -1.31
CHD4-208ENST00000540960 SLC25A32Q9H2D1 315 aa6.88□□□□□ -1.31
CHD4-208ENST00000540960 PLSCR3Q9NRY6 295 aa6.88□□□□□ -1.31
CHD4-208ENST00000540960 CBLN4Q9NTU7 201 aa6.88□□□□□ -1.31
CHD4-208ENST00000540960 COA4Q9NYJ1 87 aa6.88□□□□□ -1.31
CHD4-208ENST00000540960 CALYQ9NYX4 217 aa6.88□□□□□ -1.31
CHD4-208ENST00000540960 MBD2Q9UBB5 411 aa6.88□□□□□ -1.31
CHD4-208ENST00000540960 POMT1Q9Y6A1 747 aa6.88□□□□□ -1.31
CHD4-208ENST00000540960 LINC00312Q9Y6C7 94 aa6.88□□□□□ -1.31
CHD4-208ENST00000540960 TRAV14DV4A0A0A6YYC5 116 aa6.87□□□□□ -1.31
CHD4-208ENST00000540960 NUDT19A8MXV4 375 aa6.87□□□□□ -1.31
CHD4-208ENST00000540960 C15orf65H3BRN8 121 aa6.87□□□□□ -1.31
CHD4-208ENST00000540960 ST8SIA5O15466 376 aa6.87□□□□□ -1.31
CHD4-208ENST00000540960 ADAP1O75689 374 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms