RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 PPIHO43447 177 aaKnown RBP10.04□□□□□ -0.8
AP003559.1-201ENST00000540906 FCGR3BO75015 233 aa10.04□□□□□ -0.8
AP003559.1-201ENST00000540906 SNAPC5O75971 98 aa10.04□□□□□ -0.8
AP003559.1-201ENST00000540906 UBA52P62987 128 aaKnown RBP10.04□□□□□ -0.8
AP003559.1-201ENST00000540906 NHLH2Q02577 135 aa10.04□□□□□ -0.8
AP003559.1-201ENST00000540906 CATR1Q13166 79 aa10.04□□□□□ -0.8
AP003559.1-201ENST00000540906 DIAPH2-AS1Q14236 149 aa10.04□□□□□ -0.8
AP003559.1-201ENST00000540906 ESCO2Q56NI9 601 aa10.04□□□□□ -0.8
AP003559.1-201ENST00000540906 ZNF383Q8NA42 475 aa10.04□□□□□ -0.8
AP003559.1-201ENST00000540906 RNASE11Q8TAA1 199 aaKnown RBP10.04□□□□□ -0.8
AP003559.1-201ENST00000540906 GAL3ST2Q9H3Q3 398 aa10.04□□□□□ -0.8
AP003559.1-201ENST00000540906 AKAP6Q13023 2319 aa10.04□□□□□ -0.8
AP003559.1-201ENST00000540906 SPTAN1Q13813 2472 aaKnown RBP10.03□□□□□ -0.8
AP003559.1-201ENST00000540906 NDUFA2O43678 99 aa10.03□□□□□ -0.8
AP003559.1-201ENST00000540906 CHST1O43916 411 aa10.03□□□□□ -0.8
AP003559.1-201ENST00000540906 TMEM33P57088 247 aa10.03□□□□□ -0.8
AP003559.1-201ENST00000540906 MRPS11P82912 194 aaKnown RBP10.03□□□□□ -0.8
AP003559.1-201ENST00000540906 VKORC1L1Q8N0U8 176 aa10.03□□□□□ -0.8
AP003559.1-201ENST00000540906 SCARB1Q8WTV0 552 aa10.03□□□□□ -0.8
AP003559.1-201ENST00000540906 NEU4Q8WWR8 484 aaPredicted RBP10.03□□□□□ -0.8
AP003559.1-201ENST00000540906 CXorf58Q96LI9 332 aa10.03□□□□□ -0.8
AP003559.1-201ENST00000540906 PLA2G2EQ9NZK7 142 aa10.03□□□□□ -0.8
AP003559.1-201ENST00000540906 MMP24Q9Y5R2 645 aa10.03□□□□□ -0.8
AP003559.1-201ENST00000540906 C22orf46C9J442 243 aa10.03□□□□□ -0.8
AP003559.1-201ENST00000540906 TEX46H3BTG2 121 aa10.03□□□□□ -0.8
AP003559.1-201ENST00000540906 GPR137BO60478 399 aa10.03□□□□□ -0.8
AP003559.1-201ENST00000540906 FSTL3O95633 263 aa10.03□□□□□ -0.8
AP003559.1-201ENST00000540906 NMBP08949 121 aa10.03□□□□□ -0.8
AP003559.1-201ENST00000540906 OR9G9P0C7N8 305 aa10.03□□□□□ -0.8
AP003559.1-201ENST00000540906 IAPPP10997 89 aa10.03□□□□□ -0.8
AP003559.1-201ENST00000540906 SLC25A6P12236 298 aa10.03□□□□□ -0.8
AP003559.1-201ENST00000540906 NUP62P37198 522 aaPredicted RBP10.03□□□□□ -0.8
AP003559.1-201ENST00000540906 P2RY1P47900 373 aa10.03□□□□□ -0.8
AP003559.1-201ENST00000540906 RAB7AP51149 207 aa10.03□□□□□ -0.8
AP003559.1-201ENST00000540906 NDUFA5Q16718 116 aa10.03□□□□□ -0.8
AP003559.1-201ENST00000540906 CLLU1Q5K131 121 aa10.03□□□□□ -0.8
AP003559.1-201ENST00000540906 WDR25Q64LD2 544 aaPredicted RBP10.03□□□□□ -0.8
AP003559.1-201ENST00000540906 GAB2Q9UQC2 676 aa10.03□□□□□ -0.8
AP003559.1-201ENST00000540906 A1L4Q6 167 aa10.02□□□□□ -0.81
AP003559.1-201ENST00000540906 H3BP45 60 aa10.02□□□□□ -0.81
AP003559.1-201ENST00000540906 CT45A6P0DMU7 189 aa10.02□□□□□ -0.81
AP003559.1-201ENST00000540906 CT45A5P0DMU8 189 aa10.02□□□□□ -0.81
AP003559.1-201ENST00000540906 CT45A7P0DMV0 189 aa10.02□□□□□ -0.81
AP003559.1-201ENST00000540906 EWSR1Q01844 656 aaKnown RBP eCLIP10.02□□□□□ -0.81
AP003559.1-201ENST00000540906 SSX9Q7RTT3 188 aa10.02□□□□□ -0.81
AP003559.1-201ENST00000540906 STOML3Q8TAV4 291 aa10.02□□□□□ -0.81
AP003559.1-201ENST00000540906 R3HDM4Q96D70 268 aa10.02□□□□□ -0.81
AP003559.1-201ENST00000540906 GSX2Q9BZM3 304 aa10.02□□□□□ -0.81
AP003559.1-201ENST00000540906 PLEKHA2Q9HB19 425 aa10.02□□□□□ -0.81
AP003559.1-201ENST00000540906 RAB9BQ9NP90 201 aa10.02□□□□□ -0.81
AP003559.1-201ENST00000540906 ZC4H2Q9NQZ6 224 aa10.02□□□□□ -0.81
AP003559.1-201ENST00000540906 UTP20O75691 2785 aaKnown RBP10.02□□□□□ -0.81
AP003559.1-201ENST00000540906 TRAV3A0A0B4J244 114 aa10.01□□□□□ -0.81
AP003559.1-201ENST00000540906 WRBO00258 174 aa10.01□□□□□ -0.81
AP003559.1-201ENST00000540906 RAB29O14966 203 aa10.01□□□□□ -0.81
AP003559.1-201ENST00000540906 IGHV1-8P0DP01 117 aa10.01□□□□□ -0.81
AP003559.1-201ENST00000540906 REG1BP48304 166 aa10.01□□□□□ -0.81
AP003559.1-201ENST00000540906 SPINK9Q5DT21 86 aa10.01□□□□□ -0.81
AP003559.1-201ENST00000540906 OR2C3Q8N628 320 aa10.01□□□□□ -0.81
AP003559.1-201ENST00000540906 OR10A7Q8NGE5 316 aa10.01□□□□□ -0.81
AP003559.1-201ENST00000540906 IGFBPL1Q8WX77 278 aa10.01□□□□□ -0.81
AP003559.1-201ENST00000540906 MRPL20Q9BYC9 149 aaKnown RBP10.01□□□□□ -0.81
AP003559.1-201ENST00000540906 CHODLQ9H9P2 273 aa10.01□□□□□ -0.81
AP003559.1-201ENST00000540906 TET2Q6N021 2002 aaPredicted RBP10.01□□□□□ -0.81
AP003559.1-201ENST00000540906 UBR5O95071 2799 aaPredicted RBP10.01□□□□□ -0.81
AP003559.1-201ENST00000540906 LINC00862A6NCI5 91 aa10□□□□□ -0.81
AP003559.1-201ENST00000540906 MARCH11A6NNE9 402 aa10□□□□□ -0.81
AP003559.1-201ENST00000540906 CAV2P51636 162 aa10□□□□□ -0.81
AP003559.1-201ENST00000540906 OR2B8PP59922 312 aa10□□□□□ -0.81
AP003559.1-201ENST00000540906 ZNF833PQ6ZTB9 187 aa10□□□□□ -0.81
AP003559.1-201ENST00000540906 TMEM252Q8N6L7 170 aa10□□□□□ -0.81
AP003559.1-201ENST00000540906 ZNF436-AS1Q8NC38 126 aaPredicted RBP10□□□□□ -0.81
AP003559.1-201ENST00000540906 FAM216AQ8WUB2 273 aa10□□□□□ -0.81
AP003559.1-201ENST00000540906 NEIL1Q96FI4 390 aaPredicted RBP10□□□□□ -0.81
AP003559.1-201ENST00000540906 FAM212BQ9NTI7 297 aaPredicted RBP10□□□□□ -0.81
AP003559.1-201ENST00000540906 LYRM2Q9NU23 88 aaPredicted RBP10□□□□□ -0.81
AP003559.1-201ENST00000540906 LPAR3Q9UBY5 353 aa10□□□□□ -0.81
AP003559.1-201ENST00000540906 RFNGQ9Y644 331 aa10□□□□□ -0.81
AP003559.1-201ENST00000540906 TRBV23-1A0A0A0MS06 115 aa10□□□□□ -0.81
AP003559.1-201ENST00000540906 LEUTXA8MZ59 168 aa10□□□□□ -0.81
AP003559.1-201ENST00000540906 J3QR06 171 aa10□□□□□ -0.81
AP003559.1-201ENST00000540906 OVOL3O00110 214 aa10□□□□□ -0.81
AP003559.1-201ENST00000540906 CST7O76096 145 aa10□□□□□ -0.81
AP003559.1-201ENST00000540906 F12P00748 615 aaPredicted RBP10□□□□□ -0.81
AP003559.1-201ENST00000540906 TMEM267Q0VDI3 215 aaPredicted RBP10□□□□□ -0.81
AP003559.1-201ENST00000540906 TMEM30BQ3MIR4 351 aa10□□□□□ -0.81
AP003559.1-201ENST00000540906 HAPLN4Q86UW8 402 aa10□□□□□ -0.81
AP003559.1-201ENST00000540906 TCTEX1D1Q8N7M0 179 aa10□□□□□ -0.81
AP003559.1-201ENST00000540906 OR8B3Q8NGG8 313 aa10□□□□□ -0.81
AP003559.1-201ENST00000540906 TMED6Q8WW62 240 aa10□□□□□ -0.81
AP003559.1-201ENST00000540906 RAB1CQ92928 201 aa10□□□□□ -0.81
AP003559.1-201ENST00000540906 OR8B2Q96RD0 313 aa10□□□□□ -0.81
AP003559.1-201ENST00000540906 S1PR3Q99500 378 aa10□□□□□ -0.81
AP003559.1-201ENST00000540906 QTRT1Q9BXR0 403 aaKnown RBP10□□□□□ -0.81
AP003559.1-201ENST00000540906 RBKSQ9H477 322 aa10□□□□□ -0.81
AP003559.1-201ENST00000540906 ZFP57Q9NU63 452 aa10□□□□□ -0.81
AP003559.1-201ENST00000540906 AUP1Q9Y679 476 aa10□□□□□ -0.81
AP003559.1-201ENST00000540906 SYNGR2O43760 224 aa9.99□□□□□ -0.81
AP003559.1-201ENST00000540906 CRYZL1O95825 349 aa9.99□□□□□ -0.81
AP003559.1-201ENST00000540906 HPRT1P00492 218 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms