RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 LY6G6FQ5SQ64 297 aa5.59□□□□□ -1.51
YBX3-209ENST00000540747 ZNF57Q68EA5 555 aaPredicted RBP5.59□□□□□ -1.51
YBX3-209ENST00000540747 IL34Q6ZMJ4 242 aa5.59□□□□□ -1.51
YBX3-209ENST00000540747 ZNF833PQ6ZTB9 187 aa5.59□□□□□ -1.51
YBX3-209ENST00000540747 CEACAM19Q7Z692 300 aa5.59□□□□□ -1.51
YBX3-209ENST00000540747 HAPLN4Q86UW8 402 aa5.59□□□□□ -1.51
YBX3-209ENST00000540747 Q8N402 240 aa5.59□□□□□ -1.51
YBX3-209ENST00000540747 OR10V1Q8NGI7 309 aa5.59□□□□□ -1.51
YBX3-209ENST00000540747 OR5AK2Q8NH90 309 aa5.59□□□□□ -1.51
YBX3-209ENST00000540747 CCDC107Q8WV48 283 aa5.59□□□□□ -1.51
YBX3-209ENST00000540747 KCTD12Q96CX2 325 aaKnown RBP5.59□□□□□ -1.51
YBX3-209ENST00000540747 RHOVQ96L33 236 aa5.59□□□□□ -1.51
YBX3-209ENST00000540747 SPATA25Q9BR10 227 aa5.59□□□□□ -1.51
YBX3-209ENST00000540747 C11orf54Q9H0W9 315 aaPredicted RBP5.59□□□□□ -1.51
YBX3-209ENST00000540747 MBNL3Q9NUK0 354 aaKnown RBP5.59□□□□□ -1.51
YBX3-209ENST00000540747 DHDHQ9UQ10 334 aa5.59□□□□□ -1.51
YBX3-209ENST00000540747 FOXA2Q9Y261 457 aaPredicted RBP5.59□□□□□ -1.51
YBX3-209ENST00000540747 NUBP2Q9Y5Y2 271 aa5.59□□□□□ -1.51
YBX3-209ENST00000540747 VPS13DQ5THJ4 4388 aa5.59□□□□□ -1.51
YBX3-209ENST00000540747 ARPC1BO15143 372 aaKnown RBP5.58□□□□□ -1.52
YBX3-209ENST00000540747 PLA2G10O15496 165 aa5.58□□□□□ -1.52
YBX3-209ENST00000540747 SPINT2O43291 252 aa5.58□□□□□ -1.52
YBX3-209ENST00000540747 HSPB1P04792 205 aaKnown RBP5.58□□□□□ -1.52
YBX3-209ENST00000540747 IGFBP3P17936 291 aaPredicted RBP5.58□□□□□ -1.52
YBX3-209ENST00000540747 RCC1P18754 421 aaPredicted RBP5.58□□□□□ -1.52
YBX3-209ENST00000540747 S100A1P23297 94 aa5.58□□□□□ -1.52
YBX3-209ENST00000540747 CX3CL1P78423 397 aa5.58□□□□□ -1.52
YBX3-209ENST00000540747 PITPNAQ00169 270 aa5.58□□□□□ -1.52
YBX3-209ENST00000540747 MRPL28Q13084 256 aaKnown RBP5.58□□□□□ -1.52
YBX3-209ENST00000540747 MORN2Q502X0 79 aa5.58□□□□□ -1.52
YBX3-209ENST00000540747 ACSM3Q53FZ2 586 aa5.58□□□□□ -1.52
YBX3-209ENST00000540747 ATAD3CQ5T2N8 411 aa5.58□□□□□ -1.52
YBX3-209ENST00000540747 C6orf183Q5T699 404 aa5.58□□□□□ -1.52
YBX3-209ENST00000540747 HACD4Q5VWC8 232 aa5.58□□□□□ -1.52
YBX3-209ENST00000540747 ZNF660Q6AZW8 331 aaPredicted RBP5.58□□□□□ -1.52
YBX3-209ENST00000540747 LINC00322Q6ZN03 302 aaPredicted RBP5.58□□□□□ -1.52
YBX3-209ENST00000540747 TMEM91Q6ZNR0 172 aa5.58□□□□□ -1.52
YBX3-209ENST00000540747 TCTEX1D1Q8N7M0 179 aa5.58□□□□□ -1.52
YBX3-209ENST00000540747 CASTOR1Q8WTX7 329 aa5.58□□□□□ -1.52
YBX3-209ENST00000540747 TSEN15Q8WW01 171 aaKnown RBP5.58□□□□□ -1.52
YBX3-209ENST00000540747 GPER1Q99527 375 aa5.58□□□□□ -1.52
YBX3-209ENST00000540747 SOSTQ9BQB4 213 aa5.58□□□□□ -1.52
YBX3-209ENST00000540747 ZNF251Q9BRH9 671 aa5.58□□□□□ -1.52
YBX3-209ENST00000540747 CST11Q9H112 138 aa5.58□□□□□ -1.52
YBX3-209ENST00000540747 METTL9Q9H1A3 318 aa5.58□□□□□ -1.52
YBX3-209ENST00000540747 GHITMQ9H3K2 345 aa5.58□□□□□ -1.52
YBX3-209ENST00000540747 TMEM138Q9NPI0 162 aa5.58□□□□□ -1.52
YBX3-209ENST00000540747 KIAA1456Q9P272 454 aa5.58□□□□□ -1.52
YBX3-209ENST00000540747 GNG12Q9UBI6 72 aa5.58□□□□□ -1.52
YBX3-209ENST00000540747 EXTL2Q9UBQ6 330 aa5.58□□□□□ -1.52
YBX3-209ENST00000540747 DNAH6Q9C0G6 4158 aa5.58□□□□□ -1.52
YBX3-209ENST00000540747 SAA2-SAA4A0A096LPE2 208 aa5.57□□□□□ -1.52
YBX3-209ENST00000540747 A0A1W2PN81 502 aa5.57□□□□□ -1.52
YBX3-209ENST00000540747 INMT-MINDY4F8WBC2 141 aa5.57□□□□□ -1.52
YBX3-209ENST00000540747 FCN1O00602 326 aa5.57□□□□□ -1.52
YBX3-209ENST00000540747 PDCD5O14737 125 aa5.57□□□□□ -1.52
YBX3-209ENST00000540747 LYRM1O43325 122 aa5.57□□□□□ -1.52
YBX3-209ENST00000540747 ZNF780AO75290 641 aaPredicted RBP5.57□□□□□ -1.52
YBX3-209ENST00000540747 CA11O75493 328 aa5.57□□□□□ -1.52
YBX3-209ENST00000540747 ARL6IP5O75915 188 aa5.57□□□□□ -1.52
YBX3-209ENST00000540747 JTBO76095 146 aa5.57□□□□□ -1.52
YBX3-209ENST00000540747 SAA2P0DJI9 122 aaPredicted RBP5.57□□□□□ -1.52
YBX3-209ENST00000540747 SNRPBP14678 240 aaKnown RBP5.57□□□□□ -1.52
YBX3-209ENST00000540747 ELK1P19419 428 aa5.57□□□□□ -1.52
YBX3-209ENST00000540747 SERPINA2P20848 420 aa5.57□□□□□ -1.52
YBX3-209ENST00000540747 ZNF93P35789 620 aaPredicted RBP5.57□□□□□ -1.52
YBX3-209ENST00000540747 CHRNA7P36544 502 aa5.57□□□□□ -1.52
YBX3-209ENST00000540747 PPP1CCP36873 323 aaKnown RBP5.57□□□□□ -1.52
YBX3-209ENST00000540747 OR3A3P47888 321 aa5.57□□□□□ -1.52
YBX3-209ENST00000540747 SOX2P48431 317 aa5.57□□□□□ -1.52
YBX3-209ENST00000540747 NKX2-5P52952 324 aaPredicted RBP5.57□□□□□ -1.52
YBX3-209ENST00000540747 HTD2P86397 168 aa5.57□□□□□ -1.52
YBX3-209ENST00000540747 KLF5Q13887 457 aaPredicted RBP5.57□□□□□ -1.52
YBX3-209ENST00000540747 ECSCRQ19T08 205 aa5.57□□□□□ -1.52
YBX3-209ENST00000540747 SIGIRRQ6IA17 410 aa5.57□□□□□ -1.52
YBX3-209ENST00000540747 PYHIN1Q6K0P9 492 aa5.57□□□□□ -1.52
YBX3-209ENST00000540747 LIN54Q6MZP7 749 aa5.57□□□□□ -1.52
YBX3-209ENST00000540747 FAM71F2Q6NXP2 309 aa5.57□□□□□ -1.52
YBX3-209ENST00000540747 RPL22L1Q6P5R6 122 aaKnown RBP5.57□□□□□ -1.52
YBX3-209ENST00000540747 TRAT1Q6PIZ9 186 aa5.57□□□□□ -1.52
YBX3-209ENST00000540747 C5orf24Q7Z6I8 188 aa5.57□□□□□ -1.52
YBX3-209ENST00000540747 SGPP2Q8IWX5 399 aa5.57□□□□□ -1.52
YBX3-209ENST00000540747 DUSP18Q8NEJ0 188 aa5.57□□□□□ -1.52
YBX3-209ENST00000540747 OR6F1Q8NGZ6 308 aa5.57□□□□□ -1.52
YBX3-209ENST00000540747 OR4K15Q8NH41 348 aa5.57□□□□□ -1.52
YBX3-209ENST00000540747 GPR148Q8TDV2 347 aa5.57□□□□□ -1.52
YBX3-209ENST00000540747 PHYHIPQ92561 330 aa5.57□□□□□ -1.52
YBX3-209ENST00000540747 TMEM106AQ96A25 262 aa5.57□□□□□ -1.52
YBX3-209ENST00000540747 FLYWCH2Q96CP2 140 aaKnown RBP5.57□□□□□ -1.52
YBX3-209ENST00000540747 OR4C12Q96R67 309 aa5.57□□□□□ -1.52
YBX3-209ENST00000540747 ABHD14AQ9BUJ0 271 aa5.57□□□□□ -1.52
YBX3-209ENST00000540747 IFI27L2Q9H2X8 130 aa5.57□□□□□ -1.52
YBX3-209ENST00000540747 TAF9BQ9HBM6 251 aa5.57□□□□□ -1.52
YBX3-209ENST00000540747 SPACA1Q9HBV2 294 aa5.57□□□□□ -1.52
YBX3-209ENST00000540747 RAB9BQ9NP90 201 aa5.57□□□□□ -1.52
YBX3-209ENST00000540747 RABL2AQ9UBK7 228 aaPredicted RBP5.57□□□□□ -1.52
YBX3-209ENST00000540747 JPT1Q9UK76 154 aa5.57□□□□□ -1.52
YBX3-209ENST00000540747 ING4Q9UNL4 249 aa5.57□□□□□ -1.52
YBX3-209ENST00000540747 RABL2BQ9UNT1 228 aa5.57□□□□□ -1.52
YBX3-209ENST00000540747 GAB2Q9UQC2 676 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms