RNA–Protein interactions for RNA: ENST00000540669.1

VPS33A-204, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS33A, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-204ENST00000540669 RGS21Q2M5E4 152 aa8.49□□□□□ -1.05
VPS33A-204ENST00000540669 FBLN7Q53RD9 439 aa8.49□□□□□ -1.05
VPS33A-204ENST00000540669 LPCAT3Q6P1A2 487 aa8.49□□□□□ -1.05
VPS33A-204ENST00000540669 BRD3OSQ6XYD6 125 aa8.49□□□□□ -1.05
VPS33A-204ENST00000540669 KCTD9Q7L273 389 aa8.49□□□□□ -1.05
VPS33A-204ENST00000540669 SLC25A42Q86VD7 318 aa8.49□□□□□ -1.05
VPS33A-204ENST00000540669 LYG1Q8N1E2 194 aa8.49□□□□□ -1.05
VPS33A-204ENST00000540669 Q8N6K4 173 aa8.49□□□□□ -1.05
VPS33A-204ENST00000540669 TCTEX1D1Q8N7M0 179 aa8.49□□□□□ -1.05
VPS33A-204ENST00000540669 OR10X1Q8NGY0 326 aa8.49□□□□□ -1.05
VPS33A-204ENST00000540669 NANPQ8TBE9 248 aa8.49□□□□□ -1.05
VPS33A-204ENST00000540669 PIFOQ8TCI5 191 aa8.49□□□□□ -1.05
VPS33A-204ENST00000540669 MALSU1Q96EH3 234 aa8.49□□□□□ -1.05
VPS33A-204ENST00000540669 ZNF48Q96MX3 618 aaPredicted RBP8.49□□□□□ -1.05
VPS33A-204ENST00000540669 HSD17B10Q99714 261 aaKnown RBP8.49□□□□□ -1.05
VPS33A-204ENST00000540669 NUDT15Q9NV35 164 aa8.49□□□□□ -1.05
VPS33A-204ENST00000540669 FAM240BA0A1B0GVZ2 78 aa8.48□□□□□ -1.05
VPS33A-204ENST00000540669 H0Y980 276 aa8.48□□□□□ -1.05
VPS33A-204ENST00000540669 H0YJW9 148 aa8.48□□□□□ -1.05
VPS33A-204ENST00000540669 J3QL48 77 aa8.48□□□□□ -1.05
VPS33A-204ENST00000540669 TOR1AO14656 332 aa8.48□□□□□ -1.05
VPS33A-204ENST00000540669 PEX14O75381 377 aa8.48□□□□□ -1.05
VPS33A-204ENST00000540669 P0C879 139 aa8.48□□□□□ -1.05
VPS33A-204ENST00000540669 VSIG10L2P0DP72 767 aa8.48□□□□□ -1.05
VPS33A-204ENST00000540669 PI3P19957 117 aa8.48□□□□□ -1.05
VPS33A-204ENST00000540669 F2RP25116 425 aa8.48□□□□□ -1.05
VPS33A-204ENST00000540669 UCP1P25874 307 aa8.48□□□□□ -1.05
VPS33A-204ENST00000540669 CEACAM3P40198 252 aa8.48□□□□□ -1.05
VPS33A-204ENST00000540669 THBS3P49746 956 aa8.48□□□□□ -1.05
VPS33A-204ENST00000540669 POU2AF1Q16633 256 aa8.48□□□□□ -1.05
VPS33A-204ENST00000540669 TGIF2LXQ8IUE1 241 aa8.48□□□□□ -1.05
VPS33A-204ENST00000540669 CADM3Q8N126 398 aa8.48□□□□□ -1.05
VPS33A-204ENST00000540669 MINDY2Q8NBR6 621 aa8.48□□□□□ -1.05
VPS33A-204ENST00000540669 ADAD2Q8NCV1 583 aaKnown RBP8.48□□□□□ -1.05
VPS33A-204ENST00000540669 ZFAND1Q8TCF1 268 aa8.48□□□□□ -1.05
VPS33A-204ENST00000540669 ADTRPQ96IZ2 230 aa8.48□□□□□ -1.05
VPS33A-204ENST00000540669 SCGB3A2Q96PL1 93 aa8.48□□□□□ -1.05
VPS33A-204ENST00000540669 JMJD8Q96S16 334 aa8.48□□□□□ -1.05
VPS33A-204ENST00000540669 S1PR3Q99500 378 aa8.48□□□□□ -1.05
VPS33A-204ENST00000540669 RNF150Q9ULK6 438 aa8.48□□□□□ -1.05
VPS33A-204ENST00000540669 FLVCR2Q9UPI3 526 aa8.48□□□□□ -1.05
VPS33A-204ENST00000540669 SOX21Q9Y651 276 aaPredicted RBP8.48□□□□□ -1.05
VPS33A-204ENST00000540669 M0R1X1 148 aa8.47□□□□□ -1.05
VPS33A-204ENST00000540669 ARPC1BO15143 372 aaKnown RBP8.47□□□□□ -1.05
VPS33A-204ENST00000540669 MPPED1O15442 326 aa8.47□□□□□ -1.05
VPS33A-204ENST00000540669 B3GALNT1O75752 331 aa8.47□□□□□ -1.05
VPS33A-204ENST00000540669 VENTXO95231 258 aa8.47□□□□□ -1.05
VPS33A-204ENST00000540669 GAPDHP04406 335 aaKnown RBP8.47□□□□□ -1.05
VPS33A-204ENST00000540669 RLN1P04808 185 aa8.47□□□□□ -1.05
VPS33A-204ENST00000540669 IL5P05113 134 aa8.47□□□□□ -1.05
VPS33A-204ENST00000540669 EPHA1P21709 976 aa8.47□□□□□ -1.05
VPS33A-204ENST00000540669 PIGPP57054 158 aa8.47□□□□□ -1.05
VPS33A-204ENST00000540669 LINC00205P59089 165 aa8.47□□□□□ -1.05
VPS33A-204ENST00000540669 TAS2R31P59538 309 aa8.47□□□□□ -1.05
VPS33A-204ENST00000540669 TAGLNQ01995 201 aaKnown RBP8.47□□□□□ -1.05
VPS33A-204ENST00000540669 ZNF585BQ52M93 769 aa8.47□□□□□ -1.05
VPS33A-204ENST00000540669 TMEM128Q5BJH2 165 aa8.47□□□□□ -1.05
VPS33A-204ENST00000540669 CCDC144NLQ6NUI1 221 aa8.47□□□□□ -1.05
VPS33A-204ENST00000540669 CCBE1Q6UXH8 406 aaPredicted RBP8.47□□□□□ -1.05
VPS33A-204ENST00000540669 RBMS3Q6XE24 437 aaKnown RBP8.47□□□□□ -1.05
VPS33A-204ENST00000540669 PDZD9Q8IXQ8 264 aa8.47□□□□□ -1.05
VPS33A-204ENST00000540669 CENPSQ8N2Z9 138 aa8.47□□□□□ -1.05
VPS33A-204ENST00000540669 LRTM2Q8N967 370 aa8.47□□□□□ -1.05
VPS33A-204ENST00000540669 ENKURQ8TC29 256 aa8.47□□□□□ -1.05
VPS33A-204ENST00000540669 GPHA2Q96T91 129 aa8.47□□□□□ -1.05
VPS33A-204ENST00000540669 NAA60Q9H7X0 242 aa8.47□□□□□ -1.05
VPS33A-204ENST00000540669 LIN7CQ9NUP9 197 aaKnown RBP8.47□□□□□ -1.05
VPS33A-204ENST00000540669 TNCP24821 2201 aa8.46□□□□□ -1.05
VPS33A-204ENST00000540669 SETD2Q9BYW2 2564 aaPredicted RBP8.46□□□□□ -1.05
VPS33A-204ENST00000540669 IGHV3OR16-10A0A075B7F0 116 aa8.46□□□□□ -1.06
VPS33A-204ENST00000540669 TIMM23O14925 209 aa8.46□□□□□ -1.06
VPS33A-204ENST00000540669 IGKV1-39P01597 117 aa8.46□□□□□ -1.06
VPS33A-204ENST00000540669 IGKV1D-39P04432 117 aa8.46□□□□□ -1.06
VPS33A-204ENST00000540669 IL6RP08887 468 aaPredicted RBP8.46□□□□□ -1.06
VPS33A-204ENST00000540669 FBP1P09467 338 aa8.46□□□□□ -1.06
VPS33A-204ENST00000540669 PGAM2P15259 253 aa8.46□□□□□ -1.06
VPS33A-204ENST00000540669 CD1BP29016 333 aa8.46□□□□□ -1.06
VPS33A-204ENST00000540669 PPP1R1AQ13522 171 aa8.46□□□□□ -1.06
VPS33A-204ENST00000540669 PHLDA2Q53GA4 152 aa8.46□□□□□ -1.06
VPS33A-204ENST00000540669 TMEM177Q53S58 311 aa8.46□□□□□ -1.06
VPS33A-204ENST00000540669 DHRS7BQ6IAN0 325 aaPredicted RBP8.46□□□□□ -1.06
VPS33A-204ENST00000540669 TBC1D26Q86UD7 250 aa8.46□□□□□ -1.06
VPS33A-204ENST00000540669 THNSL2Q86YJ6 484 aa8.46□□□□□ -1.06
VPS33A-204ENST00000540669 PDPNQ86YL7 162 aa8.46□□□□□ -1.06
VPS33A-204ENST00000540669 CMTM1Q8IZ96 169 aa8.46□□□□□ -1.06
VPS33A-204ENST00000540669 BCL6BQ8N143 479 aaPredicted RBP8.46□□□□□ -1.06
VPS33A-204ENST00000540669 CCDC71LQ8N9Z2 235 aa8.46□□□□□ -1.06
VPS33A-204ENST00000540669 LHFPL5Q8TAF8 219 aa8.46□□□□□ -1.06
VPS33A-204ENST00000540669 ZNF418Q8TF45 676 aaPredicted RBP8.46□□□□□ -1.06
VPS33A-204ENST00000540669 GLYATL2Q8WU03 294 aa8.46□□□□□ -1.06
VPS33A-204ENST00000540669 CAPSLQ8WWF8 208 aa8.46□□□□□ -1.06
VPS33A-204ENST00000540669 RPEQ96AT9 228 aa8.46□□□□□ -1.06
VPS33A-204ENST00000540669 TMEM56Q96MV1 263 aa8.46□□□□□ -1.06
VPS33A-204ENST00000540669 TP53RKQ96S44 253 aa8.46□□□□□ -1.06
VPS33A-204ENST00000540669 TMEM222Q9H0R3 208 aa8.46□□□□□ -1.06
VPS33A-204ENST00000540669 C14orf166Q9Y224 244 aaKnown RBP8.46□□□□□ -1.06
VPS33A-204ENST00000540669 TMEM56-RWDD3S4R434 201 aa8.46□□□□□ -1.06
VPS33A-204ENST00000540669 A0A1W2PRD5 423 aa8.45□□□□□ -1.06
VPS33A-204ENST00000540669 A0A1W2PRF3 423 aa8.45□□□□□ -1.06
VPS33A-204ENST00000540669 A0A1W2PRM7 423 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms