RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 BPIFB6Q8NFQ5 453 aa9.17□□□□□ -0.94
CBX3P4-202ENST00000540428 KCNK15Q9H427 330 aa9.17□□□□□ -0.94
CBX3P4-202ENST00000540428 CNIH1O95406 144 aa9.16□□□□□ -0.94
CBX3P4-202ENST00000540428 IFNA6P05013 189 aa9.16□□□□□ -0.94
CBX3P4-202ENST00000540428 CRYGBP07316 175 aa9.16□□□□□ -0.94
CBX3P4-202ENST00000540428 GNAO1P09471 354 aa9.16□□□□□ -0.94
CBX3P4-202ENST00000540428 RANBP1P43487 201 aa9.16□□□□□ -0.94
CBX3P4-202ENST00000540428 SERPINB10P48595 397 aa9.16□□□□□ -0.94
CBX3P4-202ENST00000540428 TAGLNQ01995 201 aaKnown RBP9.16□□□□□ -0.94
CBX3P4-202ENST00000540428 HAGHQ16775 308 aa9.16□□□□□ -0.94
CBX3P4-202ENST00000540428 TATDN3Q17R31 274 aa9.16□□□□□ -0.94
CBX3P4-202ENST00000540428 ZNF343Q6P1L6 599 aa9.16□□□□□ -0.94
CBX3P4-202ENST00000540428 IL34Q6ZMJ4 242 aa9.16□□□□□ -0.94
CBX3P4-202ENST00000540428 CEACAM19Q7Z692 300 aa9.16□□□□□ -0.94
CBX3P4-202ENST00000540428 Q8N402 240 aa9.16□□□□□ -0.94
CBX3P4-202ENST00000540428 OR5T1Q8NG75 326 aa9.16□□□□□ -0.94
CBX3P4-202ENST00000540428 USMG5Q96IX5 58 aa9.16□□□□□ -0.94
CBX3P4-202ENST00000540428 HDHD3Q9BSH5 251 aaPredicted RBP9.16□□□□□ -0.94
CBX3P4-202ENST00000540428 THAP7Q9BT49 309 aaPredicted RBP9.16□□□□□ -0.94
CBX3P4-202ENST00000540428 TMED9Q9BVK6 235 aa9.16□□□□□ -0.94
CBX3P4-202ENST00000540428 TINAGL1Q9GZM7 467 aaPredicted RBP9.16□□□□□ -0.94
CBX3P4-202ENST00000540428 SLC35D1Q9NTN3 355 aa9.16□□□□□ -0.94
CBX3P4-202ENST00000540428 GAR1Q9NY12 217 aaKnown RBP9.16□□□□□ -0.94
CBX3P4-202ENST00000540428 RDH8Q9NYR8 311 aa9.16□□□□□ -0.94
CBX3P4-202ENST00000540428 PEF1Q9UBV8 284 aaKnown RBP9.16□□□□□ -0.94
CBX3P4-202ENST00000540428 IGKV1-6A0A0C4DH72 117 aa9.15□□□□□ -0.94
CBX3P4-202ENST00000540428 TRDCB7Z8K6 153 aa9.15□□□□□ -0.94
CBX3P4-202ENST00000540428 M0R1X1 148 aa9.15□□□□□ -0.94
CBX3P4-202ENST00000540428 SLC17A2O00624 439 aa9.15□□□□□ -0.94
CBX3P4-202ENST00000540428 IGLV2-23P01705 113 aa9.15□□□□□ -0.94
CBX3P4-202ENST00000540428 CDK1P06493 297 aa9.15□□□□□ -0.94
CBX3P4-202ENST00000540428 SNRPBP14678 240 aaKnown RBP9.15□□□□□ -0.94
CBX3P4-202ENST00000540428 TMEM50BP56557 158 aa9.15□□□□□ -0.94
CBX3P4-202ENST00000540428 LINC00205P59089 165 aa9.15□□□□□ -0.94
CBX3P4-202ENST00000540428 SPHARQ15513 63 aa9.15□□□□□ -0.94
CBX3P4-202ENST00000540428 LCN12Q6JVE5 192 aa9.15□□□□□ -0.94
CBX3P4-202ENST00000540428 GTSCR1Q86UQ5 136 aa9.15□□□□□ -0.94
CBX3P4-202ENST00000540428 OR2K2Q8NGT1 345 aa9.15□□□□□ -0.94
CBX3P4-202ENST00000540428 CMSS1Q9BQ75 279 aaKnown RBP9.15□□□□□ -0.94
CBX3P4-202ENST00000540428 ANKRD34BA5PLL1 514 aa9.14□□□□□ -0.95
CBX3P4-202ENST00000540428 EBAG9O00559 213 aa9.14□□□□□ -0.95
CBX3P4-202ENST00000540428 OR2A4O95047 310 aa9.14□□□□□ -0.95
CBX3P4-202ENST00000540428 DIRAS3O95661 229 aa9.14□□□□□ -0.95
CBX3P4-202ENST00000540428 CSN3P07498 182 aa9.14□□□□□ -0.95
CBX3P4-202ENST00000540428 SYNJ2BPP57105 145 aa9.14□□□□□ -0.95
CBX3P4-202ENST00000540428 CBX3Q13185 183 aa9.14□□□□□ -0.95
CBX3P4-202ENST00000540428 TMEM177Q53S58 311 aa9.14□□□□□ -0.95
CBX3P4-202ENST00000540428 OR56B1Q8NGI3 324 aa9.14□□□□□ -0.95
CBX3P4-202ENST00000540428 OR4A4PQ8NGN8 299 aa9.14□□□□□ -0.95
CBX3P4-202ENST00000540428 ARHGAP5-AS1Q96IT6 56 aa9.14□□□□□ -0.95
CBX3P4-202ENST00000540428 HARBI1Q96MB7 349 aa9.14□□□□□ -0.95
CBX3P4-202ENST00000540428 PECRQ9BY49 303 aa9.14□□□□□ -0.95
CBX3P4-202ENST00000540428 TUBA4BQ9H853 241 aa9.14□□□□□ -0.95
CBX3P4-202ENST00000540428 PLGRKTQ9HBL7 147 aa9.14□□□□□ -0.95
CBX3P4-202ENST00000540428 LSM2Q9Y333 95 aaKnown RBP9.14□□□□□ -0.95
CBX3P4-202ENST00000540428 STARD9Q9P2P6 4700 aa9.13□□□□□ -0.95
CBX3P4-202ENST00000540428 BIRC6Q9NR09 4857 aa9.13□□□□□ -0.95
CBX3P4-202ENST00000540428 ERICH4A6NGS2 130 aa9.13□□□□□ -0.95
CBX3P4-202ENST00000540428 FABP7O15540 132 aa9.13□□□□□ -0.95
CBX3P4-202ENST00000540428 ARL6IP5O75915 188 aa9.13□□□□□ -0.95
CBX3P4-202ENST00000540428 RRASP10301 218 aa9.13□□□□□ -0.95
CBX3P4-202ENST00000540428 MECP2P51608 486 aaKnown RBP9.13□□□□□ -0.95
CBX3P4-202ENST00000540428 PJVKQ0ZLH3 352 aa9.13□□□□□ -0.95
CBX3P4-202ENST00000540428 DYRK1AQ13627 763 aa9.13□□□□□ -0.95
CBX3P4-202ENST00000540428 P2RY14Q15391 338 aa9.13□□□□□ -0.95
CBX3P4-202ENST00000540428 RAB11BQ15907 218 aa9.13□□□□□ -0.95
CBX3P4-202ENST00000540428 RPEL1Q2QD12 228 aa9.13□□□□□ -0.95
CBX3P4-202ENST00000540428 ADAMTSL5Q6ZMM2 481 aa9.13□□□□□ -0.95
CBX3P4-202ENST00000540428 BVESQ8NE79 360 aa9.13□□□□□ -0.95
CBX3P4-202ENST00000540428 IL17DQ8TAD2 202 aa9.13□□□□□ -0.95
CBX3P4-202ENST00000540428 UFD1Q92890 307 aa9.13□□□□□ -0.95
CBX3P4-202ENST00000540428 GFI1Q99684 422 aa9.13□□□□□ -0.95
CBX3P4-202ENST00000540428 LYSTQ99698 3801 aa9.13□□□□□ -0.95
CBX3P4-202ENST00000540428 CABLES2Q9BTV7 478 aa9.13□□□□□ -0.95
CBX3P4-202ENST00000540428 SDHAF2Q9NX18 166 aa9.13□□□□□ -0.95
CBX3P4-202ENST00000540428 COA4Q9NYJ1 87 aa9.13□□□□□ -0.95
CBX3P4-202ENST00000540428 PEMTQ9UBM1 199 aa9.13□□□□□ -0.95
CBX3P4-202ENST00000540428 NKX1-2Q9UD57 310 aaPredicted RBP9.13□□□□□ -0.95
CBX3P4-202ENST00000540428 DNAH1Q9P2D7 4330 aa9.13□□□□□ -0.95
CBX3P4-202ENST00000540428 EPPK1P58107 5090 aaKnown RBP9.12□□□□□ -0.95
CBX3P4-202ENST00000540428 SHISA3A0PJX4 238 aa9.12□□□□□ -0.95
CBX3P4-202ENST00000540428 CASQ2O14958 399 aaPredicted RBP9.12□□□□□ -0.95
CBX3P4-202ENST00000540428 SHOXO15266 292 aa9.12□□□□□ -0.95
CBX3P4-202ENST00000540428 AIREO43918 545 aa9.12□□□□□ -0.95
CBX3P4-202ENST00000540428 PSMA1P25786 263 aaKnown RBP9.12□□□□□ -0.95
CBX3P4-202ENST00000540428 MRPS15P82914 257 aaKnown RBP9.12□□□□□ -0.95
CBX3P4-202ENST00000540428 MED22Q15528 200 aa9.12□□□□□ -0.95
CBX3P4-202ENST00000540428 TRAM1Q15629 374 aa9.12□□□□□ -0.95
CBX3P4-202ENST00000540428 RTL8BQ17RB0 113 aa9.12□□□□□ -0.95
CBX3P4-202ENST00000540428 PLAC9Q5JTB6 97 aa9.12□□□□□ -0.95
CBX3P4-202ENST00000540428 OGFRL1Q5TC84 451 aaPredicted RBP9.12□□□□□ -0.95
CBX3P4-202ENST00000540428 LIPKQ5VXJ0 399 aa9.12□□□□□ -0.95
CBX3P4-202ENST00000540428 LINC00322Q6ZN03 302 aaPredicted RBP9.12□□□□□ -0.95
CBX3P4-202ENST00000540428 LAX1Q8IWV1 398 aa9.12□□□□□ -0.95
CBX3P4-202ENST00000540428 TEX45Q8NA69 505 aa9.12□□□□□ -0.95
CBX3P4-202ENST00000540428 ADAD2Q8NCV1 583 aaKnown RBP9.12□□□□□ -0.95
CBX3P4-202ENST00000540428 SNAPC3Q92966 411 aa9.12□□□□□ -0.95
CBX3P4-202ENST00000540428 PHB2Q99623 299 aa9.12□□□□□ -0.95
CBX3P4-202ENST00000540428 CENPOQ9BU64 300 aa9.12□□□□□ -0.95
CBX3P4-202ENST00000540428 OR2D2Q9H210 308 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms