RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 RNF5Q99942 180 aa14.37□□□□□ -0.11
SNRPA1-203ENST00000540017 KIAA1456Q9P272 454 aa14.37□□□□□ -0.11
SNRPA1-203ENST00000540017 ATP6V0E1O15342 81 aa14.36□□□□□ -0.11
SNRPA1-203ENST00000540017 APOA2P02652 100 aa14.36□□□□□ -0.11
SNRPA1-203ENST00000540017 ZNF182P17025 639 aaPredicted RBP14.36□□□□□ -0.11
SNRPA1-203ENST00000540017 DUTP33316 252 aaKnown RBP14.36□□□□□ -0.11
SNRPA1-203ENST00000540017 CBX5P45973 191 aa14.36□□□□□ -0.11
SNRPA1-203ENST00000540017 ARPC4P59998 168 aa14.36□□□□□ -0.11
SNRPA1-203ENST00000540017 RPS16P62249 146 aaKnown RBP14.36□□□□□ -0.11
SNRPA1-203ENST00000540017 NDPQ00604 133 aa14.36□□□□□ -0.11
SNRPA1-203ENST00000540017 KHDC1LQ5JSQ8 128 aa14.36□□□□□ -0.11
SNRPA1-203ENST00000540017 LCNL1Q6ZST4 164 aa14.36□□□□□ -0.11
SNRPA1-203ENST00000540017 C18orf65Q6ZTR6 163 aa14.36□□□□□ -0.11
SNRPA1-203ENST00000540017 ZNF645Q8N7E2 425 aa14.36□□□□□ -0.11
SNRPA1-203ENST00000540017 BVESQ8NE79 360 aa14.36□□□□□ -0.11
SNRPA1-203ENST00000540017 CMTM3Q96MX0 182 aa14.36□□□□□ -0.11
SNRPA1-203ENST00000540017 OR51J1Q9H342 316 aa14.36□□□□□ -0.11
SNRPA1-203ENST00000540017 TPSG1Q9NRR2 321 aa14.36□□□□□ -0.11
SNRPA1-203ENST00000540017 ANAPC10Q9UM13 185 aa14.36□□□□□ -0.11
SNRPA1-203ENST00000540017 FBXO7Q9Y3I1 522 aa14.36□□□□□ -0.11
SNRPA1-203ENST00000540017 G3V318 75 aa14.35□□□□□ -0.11
SNRPA1-203ENST00000540017 IGLV2-23P01705 113 aa14.35□□□□□ -0.11
SNRPA1-203ENST00000540017 AADACP22760 399 aa14.35□□□□□ -0.11
SNRPA1-203ENST00000540017 RPL5P46777 297 aaKnown RBP14.35□□□□□ -0.11
SNRPA1-203ENST00000540017 THBS3P49746 956 aa14.35□□□□□ -0.11
SNRPA1-203ENST00000540017 SLC35B1P78383 322 aa14.35□□□□□ -0.11
SNRPA1-203ENST00000540017 OR5AP2Q8NGF4 316 aa14.35□□□□□ -0.11
SNRPA1-203ENST00000540017 FLYWCH2Q96CP2 140 aaKnown RBP14.35□□□□□ -0.11
SNRPA1-203ENST00000540017 CLCC1Q96S66 551 aa14.35□□□□□ -0.11
SNRPA1-203ENST00000540017 NECAP2Q9NVZ3 263 aa14.35□□□□□ -0.11
SNRPA1-203ENST00000540017 METTL1Q9UBP6 276 aaKnown RBP14.35□□□□□ -0.11
SNRPA1-203ENST00000540017 ZNF580Q9UK33 172 aa14.35□□□□□ -0.11
SNRPA1-203ENST00000540017 MRPS7Q9Y2R9 242 aaKnown RBP14.35□□□□□ -0.11
SNRPA1-203ENST00000540017 WSB1Q9Y6I7 421 aa14.35□□□□□ -0.11
SNRPA1-203ENST00000540017 PLXNB1O43157 2135 aa14.35□□□□□ -0.11
SNRPA1-203ENST00000540017 MEGF8Q7Z7M0 2845 aa14.34□□□□□ -0.11
SNRPA1-203ENST00000540017 SRRM4A7MD48 611 aaKnown RBP14.34□□□□□ -0.11
SNRPA1-203ENST00000540017 OR5H8P0DN80 308 aa14.34□□□□□ -0.11
SNRPA1-203ENST00000540017 EGR2P11161 476 aaPredicted RBP14.34□□□□□ -0.11
SNRPA1-203ENST00000540017 FCGR2CP31995 323 aa14.34□□□□□ -0.11
SNRPA1-203ENST00000540017 PRSS3P35030 304 aa14.34□□□□□ -0.11
SNRPA1-203ENST00000540017 RPL30P62888 115 aaKnown RBP14.34□□□□□ -0.11
SNRPA1-203ENST00000540017 CX3CL1P78423 397 aa14.34□□□□□ -0.11
SNRPA1-203ENST00000540017 PLGLAQ15195 96 aa14.34□□□□□ -0.11
SNRPA1-203ENST00000540017 OR4F17Q8NGA8 305 aa14.34□□□□□ -0.11
SNRPA1-203ENST00000540017 OR4F4Q96R69 305 aa14.34□□□□□ -0.11
SNRPA1-203ENST00000540017 TSNAXQ99598 290 aaKnown RBP14.34□□□□□ -0.11
SNRPA1-203ENST00000540017 IFT46Q9NQC8 304 aa14.34□□□□□ -0.11
SNRPA1-203ENST00000540017 PARP11Q9NR21 331 aa14.34□□□□□ -0.11
SNRPA1-203ENST00000540017 RBMX2Q9Y388 322 aaKnown RBP14.34□□□□□ -0.11
SNRPA1-203ENST00000540017 SLC25A17O43808 307 aa14.33□□□□□ -0.12
SNRPA1-203ENST00000540017 RPLP1P05386 114 aaKnown RBP14.33□□□□□ -0.12
SNRPA1-203ENST00000540017 NAT1P18440 290 aa14.33□□□□□ -0.12
SNRPA1-203ENST00000540017 PPIFP30405 207 aaKnown RBP14.33□□□□□ -0.12
SNRPA1-203ENST00000540017 RPL23AP62750 156 aaKnown RBP14.33□□□□□ -0.12
SNRPA1-203ENST00000540017 EIF4EBP1Q13541 118 aaPredicted RBP14.33□□□□□ -0.12
SNRPA1-203ENST00000540017 CDK10Q15131 360 aa14.33□□□□□ -0.12
SNRPA1-203ENST00000540017 TMEM177Q53S58 311 aa14.33□□□□□ -0.12
SNRPA1-203ENST00000540017 MZT2AQ6P582 158 aa14.33□□□□□ -0.12
SNRPA1-203ENST00000540017 TEX38Q6PEX7 206 aa14.33□□□□□ -0.12
SNRPA1-203ENST00000540017 SNX29P2Q8IUI4 249 aa14.33□□□□□ -0.12
SNRPA1-203ENST00000540017 LYSMD2Q8IV50 215 aa14.33□□□□□ -0.12
SNRPA1-203ENST00000540017 COMMD1Q8N668 190 aa14.33□□□□□ -0.12
SNRPA1-203ENST00000540017 GPX8Q8TED1 209 aa14.33□□□□□ -0.12
SNRPA1-203ENST00000540017 RAB2BQ8WUD1 216 aa14.33□□□□□ -0.12
SNRPA1-203ENST00000540017 GPHA2Q96T91 129 aa14.33□□□□□ -0.12
SNRPA1-203ENST00000540017 SMIM31A0A1B0GVY4 71 aa14.32□□□□□ -0.12
SNRPA1-203ENST00000540017 FAM25AB3EWG3 89 aa14.32□□□□□ -0.12
SNRPA1-203ENST00000540017 FAM25CB3EWG5 89 aa14.32□□□□□ -0.12
SNRPA1-203ENST00000540017 FAM25GB3EWG6 89 aa14.32□□□□□ -0.12
SNRPA1-203ENST00000540017 SPDEFO95238 335 aa14.32□□□□□ -0.12
SNRPA1-203ENST00000540017 PPYP01298 95 aa14.32□□□□□ -0.12
SNRPA1-203ENST00000540017 IGHG4P01861 327 aa14.32□□□□□ -0.12
SNRPA1-203ENST00000540017 CRYGBP07316 175 aa14.32□□□□□ -0.12
SNRPA1-203ENST00000540017 VDAC1P21796 283 aa14.32□□□□□ -0.12
SNRPA1-203ENST00000540017 RFX2P48378 723 aa14.32□□□□□ -0.12
SNRPA1-203ENST00000540017 TMBIM6P55061 237 aa14.32□□□□□ -0.12
SNRPA1-203ENST00000540017 TAGLNQ01995 201 aaKnown RBP14.32□□□□□ -0.12
SNRPA1-203ENST00000540017 PJVKQ0ZLH3 352 aa14.32□□□□□ -0.12
SNRPA1-203ENST00000540017 C19orf54Q5BKX5 351 aa14.32□□□□□ -0.12
SNRPA1-203ENST00000540017 ZNF660Q6AZW8 331 aaPredicted RBP14.32□□□□□ -0.12
SNRPA1-203ENST00000540017 RNF152Q8N8N0 203 aa14.32□□□□□ -0.12
SNRPA1-203ENST00000540017 AP3S1Q92572 193 aa14.32□□□□□ -0.12
SNRPA1-203ENST00000540017 ADTRPQ96IZ2 230 aa14.32□□□□□ -0.12
SNRPA1-203ENST00000540017 HARBI1Q96MB7 349 aa14.32□□□□□ -0.12
SNRPA1-203ENST00000540017 GON7Q9BXV9 100 aa14.32□□□□□ -0.12
SNRPA1-203ENST00000540017 MIXL1Q9H2W2 232 aa14.32□□□□□ -0.12
SNRPA1-203ENST00000540017 CCL28Q9NRJ3 127 aa14.32□□□□□ -0.12
SNRPA1-203ENST00000540017 SLC22A5O76082 557 aa14.31□□□□□ -0.12
SNRPA1-203ENST00000540017 CRYZL1O95825 349 aa14.31□□□□□ -0.12
SNRPA1-203ENST00000540017 CA2P00918 260 aa14.31□□□□□ -0.12
SNRPA1-203ENST00000540017 PMP2P02689 132 aa14.31□□□□□ -0.12
SNRPA1-203ENST00000540017 LGALS7P47929 136 aa14.31□□□□□ -0.12
SNRPA1-203ENST00000540017 CRIP2P52943 208 aaPredicted RBP14.31□□□□□ -0.12
SNRPA1-203ENST00000540017 BRWD1-AS2P59051 145 aa14.31□□□□□ -0.12
SNRPA1-203ENST00000540017 SSBP2P81877 361 aaPredicted RBP14.31□□□□□ -0.12
SNRPA1-203ENST00000540017 FOXE3Q13461 319 aa14.31□□□□□ -0.12
SNRPA1-203ENST00000540017 RTL8BQ17RB0 113 aa14.31□□□□□ -0.12
SNRPA1-203ENST00000540017 MRGPRG-AS1Q2M3A8 158 aa14.31□□□□□ -0.12
SNRPA1-203ENST00000540017 ETV3LQ6ZN32 361 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms