RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 RASL10BQ96S79 203 aa10.73□□□□□ -0.69
DDX55-206ENST00000539934 ISG20L2Q9H9L3 353 aaKnown RBP10.73□□□□□ -0.69
DDX55-206ENST00000539934 FBLN5Q9UBX5 448 aa10.73□□□□□ -0.69
DDX55-206ENST00000539934 HSF4Q9ULV5 492 aa10.73□□□□□ -0.69
DDX55-206ENST00000539934 VDAC3Q9Y277 283 aa10.73□□□□□ -0.69
DDX55-206ENST00000539934 TRBV6-7A0A0A0MS04 114 aa10.73□□□□□ -0.69
DDX55-206ENST00000539934 J3QR89 54 aa10.73□□□□□ -0.69
DDX55-206ENST00000539934 CRYGBP07316 175 aa10.73□□□□□ -0.69
DDX55-206ENST00000539934 COX6A1P12074 109 aa10.73□□□□□ -0.69
DDX55-206ENST00000539934 FOXE3Q13461 319 aa10.73□□□□□ -0.69
DDX55-206ENST00000539934 C1orf140Q5VVS0 124 aa10.73□□□□□ -0.69
DDX55-206ENST00000539934 FOXI2Q6ZQN5 318 aa10.73□□□□□ -0.69
DDX55-206ENST00000539934 LRP11Q86VZ4 500 aa10.73□□□□□ -0.69
DDX55-206ENST00000539934 SYS1Q8N2H4 156 aa10.73□□□□□ -0.69
DDX55-206ENST00000539934 MUC15Q8N387 334 aa10.73□□□□□ -0.69
DDX55-206ENST00000539934 CLEC1AQ8NC01 280 aa10.73□□□□□ -0.69
DDX55-206ENST00000539934 OR6K6Q8NGW6 343 aa10.73□□□□□ -0.69
DDX55-206ENST00000539934 ZPLD1Q8TCW7 415 aa10.73□□□□□ -0.69
DDX55-206ENST00000539934 ST8SIA1Q92185 356 aa10.73□□□□□ -0.69
DDX55-206ENST00000539934 F8P00451 2351 aa10.72□□□□□ -0.69
DDX55-206ENST00000539934 SHISA3A0PJX4 238 aa10.72□□□□□ -0.69
DDX55-206ENST00000539934 CLDN34H7C241 214 aa10.72□□□□□ -0.69
DDX55-206ENST00000539934 DEGS1O15121 323 aa10.72□□□□□ -0.69
DDX55-206ENST00000539934 TYMSP04818 313 aa10.72□□□□□ -0.69
DDX55-206ENST00000539934 CELA2AP08217 269 aa10.72□□□□□ -0.69
DDX55-206ENST00000539934 FBXO45P0C2W1 286 aa10.72□□□□□ -0.69
DDX55-206ENST00000539934 PSG9Q00887 426 aa10.72□□□□□ -0.69
DDX55-206ENST00000539934 OR9G4Q8NGQ1 327 aa10.72□□□□□ -0.69
DDX55-206ENST00000539934 EML6Q6ZMW3 1958 aa10.72□□□□□ -0.69
DDX55-206ENST00000539934 APCP25054 2843 aa10.72□□□□□ -0.69
DDX55-206ENST00000539934 NSG1A0A0A6YYJ2 146 aa10.72□□□□□ -0.69
DDX55-206ENST00000539934 C11orf98E9PRG8 122 aa10.72□□□□□ -0.69
DDX55-206ENST00000539934 SYNGR3O43761 229 aa10.72□□□□□ -0.69
DDX55-206ENST00000539934 CD99P14209 185 aa10.72□□□□□ -0.69
DDX55-206ENST00000539934 CDKN2AP42771 156 aaKnown RBP10.72□□□□□ -0.69
DDX55-206ENST00000539934 GFRA1P56159 465 aa10.72□□□□□ -0.69
DDX55-206ENST00000539934 KLRB1Q12918 225 aa10.72□□□□□ -0.69
DDX55-206ENST00000539934 TMEM217Q8N7C4 229 aa10.72□□□□□ -0.69
DDX55-206ENST00000539934 OR4K17Q8NGC6 315 aa10.72□□□□□ -0.69
DDX55-206ENST00000539934 OR51A2Q8NGJ7 313 aa10.72□□□□□ -0.69
DDX55-206ENST00000539934 DCUN1D4Q92564 292 aa10.72□□□□□ -0.69
DDX55-206ENST00000539934 IMMP1LQ96LU5 166 aa10.72□□□□□ -0.69
DDX55-206ENST00000539934 ZFP3Q96NJ6 502 aa10.72□□□□□ -0.69
DDX55-206ENST00000539934 TTTY10Q9BZA0 68 aa10.72□□□□□ -0.69
DDX55-206ENST00000539934 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.71□□□□□ -0.69
DDX55-206ENST00000539934 OR2T8A6NH00 312 aa10.71□□□□□ -0.69
DDX55-206ENST00000539934 J3QLW9 94 aa10.71□□□□□ -0.69
DDX55-206ENST00000539934 NPIPB7O75200 414 aa10.71□□□□□ -0.69
DDX55-206ENST00000539934 GPANK1O95872 356 aa10.71□□□□□ -0.69
DDX55-206ENST00000539934 TCN2P20062 427 aa10.71□□□□□ -0.69
DDX55-206ENST00000539934 GRPRP30550 384 aa10.71□□□□□ -0.69
DDX55-206ENST00000539934 LCN2P80188 198 aa10.71□□□□□ -0.69
DDX55-206ENST00000539934 ZNF85Q03923 595 aa10.71□□□□□ -0.69
DDX55-206ENST00000539934 GGTLC2Q14390 218 aa10.71□□□□□ -0.69
DDX55-206ENST00000539934 OR7A5Q15622 319 aa10.71□□□□□ -0.69
DDX55-206ENST00000539934 EMC4Q5J8M3 183 aa10.71□□□□□ -0.69
DDX55-206ENST00000539934 Q6ZRG5 221 aa10.71□□□□□ -0.69
DDX55-206ENST00000539934 SUMF2Q8NBJ7 301 aa10.71□□□□□ -0.69
DDX55-206ENST00000539934 OR13G1Q8NGZ3 307 aa10.71□□□□□ -0.69
DDX55-206ENST00000539934 SLC25A43Q8WUT9 341 aaPredicted RBP10.71□□□□□ -0.69
DDX55-206ENST00000539934 RNF138Q8WVD3 245 aa10.71□□□□□ -0.69
DDX55-206ENST00000539934 NMNAT2Q9BZQ4 307 aa10.71□□□□□ -0.69
DDX55-206ENST00000539934 DIDO1Q9BTC0 2240 aaKnown RBP10.71□□□□□ -0.7
DDX55-206ENST00000539934 SHANK1Q9Y566 2161 aa10.71□□□□□ -0.7
DDX55-206ENST00000539934 FTCDNL1E5RQL4 147 aa10.7□□□□□ -0.7
DDX55-206ENST00000539934 PMS2P2O95744 297 aa10.7□□□□□ -0.7
DDX55-206ENST00000539934 RENP00797 406 aa10.7□□□□□ -0.7
DDX55-206ENST00000539934 ADH4P08319 380 aa10.7□□□□□ -0.7
DDX55-206ENST00000539934 ADRA2CP18825 462 aa10.7□□□□□ -0.7
DDX55-206ENST00000539934 APOBEC1P41238 236 aaKnown RBP10.7□□□□□ -0.7
DDX55-206ENST00000539934 SUMO1P63165 101 aaKnown RBP10.7□□□□□ -0.7
DDX55-206ENST00000539934 FOXF1Q12946 379 aa10.7□□□□□ -0.7
DDX55-206ENST00000539934 SPATA45Q537H7 98 aa10.7□□□□□ -0.7
DDX55-206ENST00000539934 TIMM23BQ5SRD1 257 aa10.7□□□□□ -0.7
DDX55-206ENST00000539934 SLC35F2Q8IXU6 374 aa10.7□□□□□ -0.7
DDX55-206ENST00000539934 C1orf174Q8IYL3 243 aa10.7□□□□□ -0.7
DDX55-206ENST00000539934 ZNF709Q8N972 641 aa10.7□□□□□ -0.7
DDX55-206ENST00000539934 ADAD2Q8NCV1 583 aaKnown RBP10.7□□□□□ -0.7
DDX55-206ENST00000539934 LFNGQ8NES3 379 aa10.7□□□□□ -0.7
DDX55-206ENST00000539934 SSC4DQ8WTU2 575 aa10.7□□□□□ -0.7
DDX55-206ENST00000539934 ZNRF4Q8WWF5 429 aa10.7□□□□□ -0.7
DDX55-206ENST00000539934 FGGYQ96C11 551 aa10.7□□□□□ -0.7
DDX55-206ENST00000539934 BTF3L4Q96K17 158 aa10.7□□□□□ -0.7
DDX55-206ENST00000539934 TIMP4Q99727 224 aa10.7□□□□□ -0.7
DDX55-206ENST00000539934 PYGO2Q9BRQ0 406 aa10.7□□□□□ -0.7
DDX55-206ENST00000539934 ZNF581Q9P0T4 197 aa10.7□□□□□ -0.7
DDX55-206ENST00000539934 MTORP42345 2549 aa10.7□□□□□ -0.7
DDX55-206ENST00000539934 GAGE10A6NGK3 116 aa10.7□□□□□ -0.7
DDX55-206ENST00000539934 F5H768 121 aa10.7□□□□□ -0.7
DDX55-206ENST00000539934 H7C1C5 153 aa10.7□□□□□ -0.7
DDX55-206ENST00000539934 MMP9P14780 707 aa10.7□□□□□ -0.7
DDX55-206ENST00000539934 PYCR1P32322 319 aa10.7□□□□□ -0.7
DDX55-206ENST00000539934 PTGDSP41222 190 aa10.7□□□□□ -0.7
DDX55-206ENST00000539934 RPS18P62269 152 aaKnown RBP10.7□□□□□ -0.7
DDX55-206ENST00000539934 LCN6P62502 163 aa10.7□□□□□ -0.7
DDX55-206ENST00000539934 PSG5Q15238 335 aa10.7□□□□□ -0.7
DDX55-206ENST00000539934 PRR30Q53SZ7 412 aaPredicted RBP10.7□□□□□ -0.7
DDX55-206ENST00000539934 TMEM78Q5T7P6 136 aa10.7□□□□□ -0.7
DDX55-206ENST00000539934 OPN5Q6U736 354 aa10.7□□□□□ -0.7
DDX55-206ENST00000539934 H2BFWTQ7Z2G1 175 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms