RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 GINS3Q9BRX5 216 aa7.4□□□□□ -1.23
DDB1-213ENST00000539332 RTBDNQ9BSG5 229 aaPredicted RBP7.4□□□□□ -1.23
DDB1-213ENST00000539332 CABLES2Q9BTV7 478 aa7.4□□□□□ -1.23
DDB1-213ENST00000539332 PRDM13Q9H4Q3 707 aa7.4□□□□□ -1.23
DDB1-213ENST00000539332 C19orf12Q9NSK7 152 aa7.4□□□□□ -1.23
DDB1-213ENST00000539332 MBNL3Q9NUK0 354 aaKnown RBP7.4□□□□□ -1.23
DDB1-213ENST00000539332 FBXL17Q9UF56 701 aa7.4□□□□□ -1.23
DDB1-213ENST00000539332 IL19Q9UHD0 177 aa7.4□□□□□ -1.23
DDB1-213ENST00000539332 NSG2Q9Y328 171 aa7.4□□□□□ -1.23
DDB1-213ENST00000539332 A6NNC1 897 aa7.39□□□□□ -1.23
DDB1-213ENST00000539332 NPIPB11E5RHQ5 1161 aa7.39□□□□□ -1.23
DDB1-213ENST00000539332 H7C1Q1 480 aa7.39□□□□□ -1.23
DDB1-213ENST00000539332 SLC31A2O15432 143 aa7.39□□□□□ -1.23
DDB1-213ENST00000539332 KCNAB3O43448 404 aa7.39□□□□□ -1.23
DDB1-213ENST00000539332 SLC25A17O43808 307 aa7.39□□□□□ -1.23
DDB1-213ENST00000539332 ADAP1O75689 374 aa7.39□□□□□ -1.23
DDB1-213ENST00000539332 DIRAS3O95661 229 aa7.39□□□□□ -1.23
DDB1-213ENST00000539332 CTSDP07339 412 aaPredicted RBP7.39□□□□□ -1.23
DDB1-213ENST00000539332 EGR1P18146 543 aa7.39□□□□□ -1.23
DDB1-213ENST00000539332 GLRA1P23415 457 aa7.39□□□□□ -1.23
DDB1-213ENST00000539332 P2RY1P47900 373 aa7.39□□□□□ -1.23
DDB1-213ENST00000539332 NPY4RP50391 375 aa7.39□□□□□ -1.23
DDB1-213ENST00000539332 UCP3P55916 312 aa7.39□□□□□ -1.23
DDB1-213ENST00000539332 TAS2R60P59551 318 aa7.39□□□□□ -1.23
DDB1-213ENST00000539332 OR2B8PP59922 312 aa7.39□□□□□ -1.23
DDB1-213ENST00000539332 HERPUD1Q15011 391 aa7.39□□□□□ -1.23
DDB1-213ENST00000539332 IAH1Q2TAA2 248 aaPredicted RBP7.39□□□□□ -1.23
DDB1-213ENST00000539332 ANKRD55Q3KP44 614 aa7.39□□□□□ -1.23
DDB1-213ENST00000539332 SPRNQ5BIV9 151 aa7.39□□□□□ -1.23
DDB1-213ENST00000539332 SOHLH1Q5JUK2 328 aa7.39□□□□□ -1.23
DDB1-213ENST00000539332 C20orf204Q6ZNR8 217 aa7.39□□□□□ -1.23
DDB1-213ENST00000539332 GCSAMQ8N6F7 178 aa7.39□□□□□ -1.23
DDB1-213ENST00000539332 PLPPR1Q8TBJ4 325 aa7.39□□□□□ -1.23
DDB1-213ENST00000539332 LRRC29Q8WV35 223 aa7.39□□□□□ -1.23
DDB1-213ENST00000539332 MOB3AQ96BX8 217 aa7.39□□□□□ -1.23
DDB1-213ENST00000539332 GALNT14Q96FL9 552 aa7.39□□□□□ -1.23
DDB1-213ENST00000539332 OR10C1Q96KK4 312 aa7.39□□□□□ -1.23
DDB1-213ENST00000539332 ZNF2Q9BSG1 426 aaPredicted RBP7.39□□□□□ -1.23
DDB1-213ENST00000539332 WIPI2Q9Y4P8 454 aa7.39□□□□□ -1.23
DDB1-213ENST00000539332 ARID1AO14497 2285 aa7.39□□□□□ -1.23
DDB1-213ENST00000539332 POLQO75417 2590 aa7.39□□□□□ -1.23
DDB1-213ENST00000539332 IGKV1-6A0A0C4DH72 117 aa7.38□□□□□ -1.23
DDB1-213ENST00000539332 IGHV3-64DA0A0J9YX35 117 aa7.38□□□□□ -1.23
DDB1-213ENST00000539332 A0A1W2PPR1 153 aa7.38□□□□□ -1.23
DDB1-213ENST00000539332 TRDCB7Z8K6 153 aa7.38□□□□□ -1.23
DDB1-213ENST00000539332 PPP1R2P9O14990 202 aa7.38□□□□□ -1.23
DDB1-213ENST00000539332 GPR137BO60478 399 aa7.38□□□□□ -1.23
DDB1-213ENST00000539332 PSPNO60542 156 aa7.38□□□□□ -1.23
DDB1-213ENST00000539332 TMEM33P57088 247 aa7.38□□□□□ -1.23
DDB1-213ENST00000539332 SUPT4H1P63272 117 aaKnown RBP7.38□□□□□ -1.23
DDB1-213ENST00000539332 HLA-DRB3P79483 266 aa7.38□□□□□ -1.23
DDB1-213ENST00000539332 ZNF616Q08AN1 781 aa7.38□□□□□ -1.23
DDB1-213ENST00000539332 EFNB3Q15768 340 aa7.38□□□□□ -1.23
DDB1-213ENST00000539332 ZNF383Q8NA42 475 aa7.38□□□□□ -1.23
DDB1-213ENST00000539332 CD300LFQ8TDQ1 290 aa7.38□□□□□ -1.23
DDB1-213ENST00000539332 NEK7Q8TDX7 302 aa7.38□□□□□ -1.23
DDB1-213ENST00000539332 ISOC2Q96AB3 205 aa7.38□□□□□ -1.23
DDB1-213ENST00000539332 SCRT1Q9BWW7 348 aa7.38□□□□□ -1.23
DDB1-213ENST00000539332 GSKIPQ9P0R6 139 aa7.38□□□□□ -1.23
DDB1-213ENST00000539332 ANKRD17O75179 2603 aaKnown RBP7.38□□□□□ -1.23
DDB1-213ENST00000539332 C17orf100A8MU93 164 aa7.38□□□□□ -1.23
DDB1-213ENST00000539332 B4DEV8 164 aa7.38□□□□□ -1.23
DDB1-213ENST00000539332 SIRPB1O00241 398 aa7.38□□□□□ -1.23
DDB1-213ENST00000539332 HSPB6O14558 160 aa7.38□□□□□ -1.23
DDB1-213ENST00000539332 HS3ST1O14792 307 aa7.38□□□□□ -1.23
DDB1-213ENST00000539332 SPRY3O43610 288 aa7.38□□□□□ -1.23
DDB1-213ENST00000539332 CLDN1O95832 211 aa7.38□□□□□ -1.23
DDB1-213ENST00000539332 CTXN2P0C2S0 81 aa7.38□□□□□ -1.23
DDB1-213ENST00000539332 AKR1C3P42330 323 aa7.38□□□□□ -1.23
DDB1-213ENST00000539332 RPS10P46783 165 aaKnown RBP7.38□□□□□ -1.23
DDB1-213ENST00000539332 OR3A1P47881 315 aa7.38□□□□□ -1.23
DDB1-213ENST00000539332 TESK1Q15569 626 aa7.38□□□□□ -1.23
DDB1-213ENST00000539332 ZNF124Q15973 351 aa7.38□□□□□ -1.23
DDB1-213ENST00000539332 SSX2Q16385 188 aa7.38□□□□□ -1.23
DDB1-213ENST00000539332 PYY3Q5JQD4 70 aa7.38□□□□□ -1.23
DDB1-213ENST00000539332 C9orf152Q5JTZ5 239 aa7.38□□□□□ -1.23
DDB1-213ENST00000539332 SLC35E4Q6ICL7 350 aa7.38□□□□□ -1.23
DDB1-213ENST00000539332 ETV3LQ6ZN32 361 aa7.38□□□□□ -1.23
DDB1-213ENST00000539332 SGPP2Q8IWX5 399 aa7.38□□□□□ -1.23
DDB1-213ENST00000539332 MUC15Q8N387 334 aa7.38□□□□□ -1.23
DDB1-213ENST00000539332 OR5R1Q8NH85 324 aa7.38□□□□□ -1.23
DDB1-213ENST00000539332 C14orf144Q96I85 54 aa7.38□□□□□ -1.23
DDB1-213ENST00000539332 C2orf88Q9BSF0 95 aa7.38□□□□□ -1.23
DDB1-213ENST00000539332 GCM1Q9NP62 436 aa7.38□□□□□ -1.23
DDB1-213ENST00000539332 IGKV1D-17A0A075B6S4 117 aa7.37□□□□□ -1.23
DDB1-213ENST00000539332 A0A1W2PPE2 198 aa7.37□□□□□ -1.23
DDB1-213ENST00000539332 A1L4Q6 167 aa7.37□□□□□ -1.23
DDB1-213ENST00000539332 ZNF737O75373 536 aa7.37□□□□□ -1.23
DDB1-213ENST00000539332 SCTP09683 121 aa7.37□□□□□ -1.23
DDB1-213ENST00000539332 PSG2P11465 335 aa7.37□□□□□ -1.23
DDB1-213ENST00000539332 DDTP30046 118 aa7.37□□□□□ -1.23
DDB1-213ENST00000539332 SPCS3P61009 180 aa7.37□□□□□ -1.23
DDB1-213ENST00000539332 VAMP2P63027 116 aa7.37□□□□□ -1.23
DDB1-213ENST00000539332 TNFAIP6P98066 277 aaPredicted RBP7.37□□□□□ -1.23
DDB1-213ENST00000539332 HOXA4Q00056 320 aaPredicted RBP7.37□□□□□ -1.23
DDB1-213ENST00000539332 SLC25A24Q6NUK1 477 aa7.37□□□□□ -1.23
DDB1-213ENST00000539332 ZCCHC24Q8N2G6 241 aaKnown RBP7.37□□□□□ -1.23
DDB1-213ENST00000539332 CD177Q8N6Q3 437 aa7.37□□□□□ -1.23
DDB1-213ENST00000539332 COQ2Q96H96 371 aa7.37□□□□□ -1.23
DDB1-213ENST00000539332 ASH1LQ9NR48 2969 aaKnown RBP7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms