RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 CFHR4Q92496 578 aa18.92■□□□□ 0.62
TMEM260-202ENST00000538838 MEGF9Q9H1U4 602 aa18.92■□□□□ 0.62
TMEM260-202ENST00000538838 NUDT15Q9NV35 164 aa18.92■□□□□ 0.62
TMEM260-202ENST00000538838 FN1P02751 2386 aaKnown RBP18.92■□□□□ 0.62
TMEM260-202ENST00000538838 TEP1Q99973 2627 aaKnown RBP18.92■□□□□ 0.62
TMEM260-202ENST00000538838 THBS3P49746 956 aa18.92■□□□□ 0.62
TMEM260-202ENST00000538838 RND3P61587 244 aa18.92■□□□□ 0.62
TMEM260-202ENST00000538838 OR2B11Q5JQS5 317 aa18.92■□□□□ 0.62
TMEM260-202ENST00000538838 ZNF66Q6ZN08 573 aa18.92■□□□□ 0.62
TMEM260-202ENST00000538838 TBC1D26Q86UD7 250 aa18.92■□□□□ 0.62
TMEM260-202ENST00000538838 TCTEX1D2Q8WW35 142 aa18.92■□□□□ 0.62
TMEM260-202ENST00000538838 TMEM230Q96A57 120 aa18.92■□□□□ 0.62
TMEM260-202ENST00000538838 COPZ2Q9P299 210 aa18.92■□□□□ 0.62
TMEM260-202ENST00000538838 TRAV6A0A075B6T7 132 aa18.91■□□□□ 0.62
TMEM260-202ENST00000538838 PTTG1O95997 202 aa18.91■□□□□ 0.62
TMEM260-202ENST00000538838 SPNP16150 400 aa18.91■□□□□ 0.62
TMEM260-202ENST00000538838 S100GP29377 79 aa18.91■□□□□ 0.62
TMEM260-202ENST00000538838 RAB13P51153 203 aa18.91■□□□□ 0.62
TMEM260-202ENST00000538838 DDB2Q92466 427 aa18.91■□□□□ 0.62
TMEM260-202ENST00000538838 H0YJW9 148 aa18.9■□□□□ 0.62
TMEM260-202ENST00000538838 CD24P25063 80 aa18.9■□□□□ 0.62
TMEM260-202ENST00000538838 ARHGDIBP52566 201 aa18.9■□□□□ 0.62
TMEM260-202ENST00000538838 CENPSQ8N2Z9 138 aa18.9■□□□□ 0.62
TMEM260-202ENST00000538838 CCDC71LQ8N9Z2 235 aa18.9■□□□□ 0.62
TMEM260-202ENST00000538838 ADTRPQ96IZ2 230 aa18.9■□□□□ 0.62
TMEM260-202ENST00000538838 AKR1C4P17516 323 aa18.89■□□□□ 0.62
TMEM260-202ENST00000538838 CATR1Q13166 79 aa18.89■□□□□ 0.62
TMEM260-202ENST00000538838 HABP2Q14520 560 aaPredicted RBP18.89■□□□□ 0.62
TMEM260-202ENST00000538838 RGS21Q2M5E4 152 aa18.89■□□□□ 0.62
TMEM260-202ENST00000538838 DUSP18Q8NEJ0 188 aa18.89■□□□□ 0.62
TMEM260-202ENST00000538838 NUBP2Q9Y5Y2 271 aa18.89■□□□□ 0.62
TMEM260-202ENST00000538838 MPPED1O15442 326 aa18.89■□□□□ 0.61
TMEM260-202ENST00000538838 TUSC1Q2TAM9 212 aa18.89■□□□□ 0.61
TMEM260-202ENST00000538838 LRRC75BQ2VPJ9 315 aa18.89■□□□□ 0.61
TMEM260-202ENST00000538838 FBLN7Q53RD9 439 aa18.89■□□□□ 0.61
TMEM260-202ENST00000538838 SIGLECL1Q8N7X8 197 aa18.89■□□□□ 0.61
TMEM260-202ENST00000538838 OR5AN1Q8NGI8 311 aa18.89■□□□□ 0.61
TMEM260-202ENST00000538838 ZFAND2BQ8WV99 257 aa18.89■□□□□ 0.61
TMEM260-202ENST00000538838 ZDHHC16Q969W1 377 aa18.89■□□□□ 0.61
TMEM260-202ENST00000538838 SSX3Q99909 188 aa18.89■□□□□ 0.61
TMEM260-202ENST00000538838 SLC35D1Q9NTN3 355 aa18.89■□□□□ 0.61
TMEM260-202ENST00000538838 RNF212BA8MTL3 300 aa18.88■□□□□ 0.61
TMEM260-202ENST00000538838 VGLL3A8MV65 326 aa18.88■□□□□ 0.61
TMEM260-202ENST00000538838 CRLF1O75462 422 aa18.88■□□□□ 0.61
TMEM260-202ENST00000538838 VENTXO95231 258 aa18.88■□□□□ 0.61
TMEM260-202ENST00000538838 APOA2P02652 100 aa18.88■□□□□ 0.61
TMEM260-202ENST00000538838 ANXA7P20073 488 aaKnown RBP18.88■□□□□ 0.61
TMEM260-202ENST00000538838 F2RP25116 425 aa18.88■□□□□ 0.61
TMEM260-202ENST00000538838 SCGB2A2Q13296 93 aa18.88■□□□□ 0.61
TMEM260-202ENST00000538838 TEX13DA0A0J9YY54 714 aaPredicted RBP18.87■□□□□ 0.61
TMEM260-202ENST00000538838 CRYM-AS1A6NIL9 109 aa18.87■□□□□ 0.61
TMEM260-202ENST00000538838 H3BUX3 64 aa18.87■□□□□ 0.61
TMEM260-202ENST00000538838 H7C2Y5 167 aa18.87■□□□□ 0.61
TMEM260-202ENST00000538838 FCGR3BO75015 233 aa18.87■□□□□ 0.61
TMEM260-202ENST00000538838 IGKV1D-33P01593 117 aa18.87■□□□□ 0.61
TMEM260-202ENST00000538838 IGKV1-33P01594 117 aa18.87■□□□□ 0.61
TMEM260-202ENST00000538838 SNRNP70P08621 437 aaKnown RBP18.87■□□□□ 0.61
TMEM260-202ENST00000538838 H2AFB2P0C5Z0 115 aa18.87■□□□□ 0.61
TMEM260-202ENST00000538838 BRS3P32247 399 aa18.87■□□□□ 0.61
TMEM260-202ENST00000538838 RAB25P57735 213 aa18.87■□□□□ 0.61
TMEM260-202ENST00000538838 BRWD1-AS2P59051 145 aa18.87■□□□□ 0.61
TMEM260-202ENST00000538838 PLET1Q6UQ28 207 aa18.87■□□□□ 0.61
TMEM260-202ENST00000538838 Q6YL49 198 aa18.87■□□□□ 0.61
TMEM260-202ENST00000538838 CAPSLQ8WWF8 208 aa18.87■□□□□ 0.61
TMEM260-202ENST00000538838 PRDM13Q9H4Q3 707 aa18.87■□□□□ 0.61
TMEM260-202ENST00000538838 NAA60Q9H7X0 242 aa18.87■□□□□ 0.61
TMEM260-202ENST00000538838 BEX1Q9HBH7 125 aa18.87■□□□□ 0.61
TMEM260-202ENST00000538838 LIN7CQ9NUP9 197 aaKnown RBP18.87■□□□□ 0.61
TMEM260-202ENST00000538838 PRELID3BQ9Y3B1 194 aa18.87■□□□□ 0.61
TMEM260-202ENST00000538838 WASHC3Q9Y3C0 194 aa18.87■□□□□ 0.61
TMEM260-202ENST00000538838 IGHV4-59P01825 116 aa18.86■□□□□ 0.61
TMEM260-202ENST00000538838 CD1BP29016 333 aa18.86■□□□□ 0.61
TMEM260-202ENST00000538838 DYNLT3P51808 116 aa18.86■□□□□ 0.61
TMEM260-202ENST00000538838 SLC25A42Q86VD7 318 aa18.86■□□□□ 0.61
TMEM260-202ENST00000538838 PIFOQ8TCI5 191 aa18.86■□□□□ 0.61
TMEM260-202ENST00000538838 TP53RKQ96S44 253 aa18.86■□□□□ 0.61
TMEM260-202ENST00000538838 FAM90A9PA6NNJ1 464 aa18.85■□□□□ 0.61
TMEM260-202ENST00000538838 RAMP3O60896 148 aa18.85■□□□□ 0.61
TMEM260-202ENST00000538838 IGKV1-16P04430 117 aa18.85■□□□□ 0.61
TMEM260-202ENST00000538838 MC5RP33032 325 aa18.85■□□□□ 0.61
TMEM260-202ENST00000538838 TAS2R31P59538 309 aa18.85■□□□□ 0.61
TMEM260-202ENST00000538838 SPAG16Q8N0X2 631 aa18.85■□□□□ 0.61
TMEM260-202ENST00000538838 C3orf85A0A1B0GTC6 90 aa18.85■□□□□ 0.61
TMEM260-202ENST00000538838 FAM157CP0CG43 387 aa18.85■□□□□ 0.61
TMEM260-202ENST00000538838 VSIG10L2P0DP72 767 aa18.85■□□□□ 0.61
TMEM260-202ENST00000538838 IER3P46695 156 aa18.85■□□□□ 0.61
TMEM260-202ENST00000538838 SUPT4H1P63272 117 aaKnown RBP18.85■□□□□ 0.61
TMEM260-202ENST00000538838 PPP1R1AQ13522 171 aa18.85■□□□□ 0.61
TMEM260-202ENST00000538838 HES1Q14469 280 aa18.85■□□□□ 0.61
TMEM260-202ENST00000538838 AANATQ16613 207 aa18.85■□□□□ 0.61
TMEM260-202ENST00000538838 RTL8BQ17RB0 113 aa18.85■□□□□ 0.61
TMEM260-202ENST00000538838 CCBE1Q6UXH8 406 aaPredicted RBP18.85■□□□□ 0.61
TMEM260-202ENST00000538838 PDPNQ86YL7 162 aa18.85■□□□□ 0.61
TMEM260-202ENST00000538838 SGPP2Q8IWX5 399 aa18.85■□□□□ 0.61
TMEM260-202ENST00000538838 H0Y980 276 aa18.84■□□□□ 0.61
TMEM260-202ENST00000538838 HOXA3O43365 443 aaPredicted RBP18.84■□□□□ 0.61
TMEM260-202ENST00000538838 CRYZL1O95825 349 aa18.84■□□□□ 0.61
TMEM260-202ENST00000538838 OR5AC1P0C628 307 aa18.84■□□□□ 0.61
TMEM260-202ENST00000538838 SP6Q3SY56 376 aa18.84■□□□□ 0.61
TMEM260-202ENST00000538838 TMEM128Q5BJH2 165 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms