RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 ZNF439Q8NDP4 499 aa14□□□□□ -0.17
CLN6-202ENST00000538696 LHFPL5Q8TAF8 219 aa14□□□□□ -0.17
CLN6-202ENST00000538696 GLYATL2Q8WU03 294 aa14□□□□□ -0.17
CLN6-202ENST00000538696 IFI27L2Q9H2X8 130 aa14□□□□□ -0.17
CLN6-202ENST00000538696 HEXA-AS1Q9H8Q6 139 aa14□□□□□ -0.17
CLN6-202ENST00000538696 A0A1W2PPE3 182 aa13.99□□□□□ -0.17
CLN6-202ENST00000538696 A0A1W2PRD5 423 aa13.99□□□□□ -0.17
CLN6-202ENST00000538696 A0A1W2PRF3 423 aa13.99□□□□□ -0.17
CLN6-202ENST00000538696 A0A1W2PRM7 423 aa13.99□□□□□ -0.17
CLN6-202ENST00000538696 FAM25EA8MYX2 175 aa13.99□□□□□ -0.17
CLN6-202ENST00000538696 H0Y980 276 aa13.99□□□□□ -0.17
CLN6-202ENST00000538696 ITGB1BP1O14713 200 aa13.99□□□□□ -0.17
CLN6-202ENST00000538696 C1QBP02746 253 aa13.99□□□□□ -0.17
CLN6-202ENST00000538696 HOXB5P09067 269 aa13.99□□□□□ -0.17
CLN6-202ENST00000538696 GNG10P50151 68 aa13.99□□□□□ -0.17
CLN6-202ENST00000538696 ZNF134P52741 427 aa13.99□□□□□ -0.17
CLN6-202ENST00000538696 EIF4EBP1Q13541 118 aaPredicted RBP13.99□□□□□ -0.17
CLN6-202ENST00000538696 MSMO1Q15800 293 aa13.99□□□□□ -0.17
CLN6-202ENST00000538696 Q3ZCU0 254 aa13.99□□□□□ -0.17
CLN6-202ENST00000538696 Q5BKY6 102 aa13.99□□□□□ -0.17
CLN6-202ENST00000538696 RUSC1-AS1Q66K80 236 aa13.99□□□□□ -0.17
CLN6-202ENST00000538696 NOXA1Q86UR1 476 aa13.99□□□□□ -0.17
CLN6-202ENST00000538696 ZBTB34Q8NCN2 500 aa13.99□□□□□ -0.17
CLN6-202ENST00000538696 OR13D1Q8NGV5 346 aa13.99□□□□□ -0.17
CLN6-202ENST00000538696 OR2T35Q8NGX2 323 aa13.99□□□□□ -0.17
CLN6-202ENST00000538696 OR51H1Q8NH63 302 aa13.99□□□□□ -0.17
CLN6-202ENST00000538696 AGMATQ9BSE5 352 aa13.99□□□□□ -0.17
CLN6-202ENST00000538696 CLEC7AQ9BXN2 247 aa13.99□□□□□ -0.17
CLN6-202ENST00000538696 TMEM222Q9H0R3 208 aa13.99□□□□□ -0.17
CLN6-202ENST00000538696 RAB18Q9NP72 206 aa13.99□□□□□ -0.17
CLN6-202ENST00000538696 IGHV1-69DA0A0B4J2H0 117 aa13.98□□□□□ -0.17
CLN6-202ENST00000538696 ODF3BA8MYP8 253 aa13.98□□□□□ -0.17
CLN6-202ENST00000538696 IGHV1-69P01742 117 aa13.98□□□□□ -0.17
CLN6-202ENST00000538696 F2RP25116 425 aa13.98□□□□□ -0.17
CLN6-202ENST00000538696 UCP1P25874 307 aa13.98□□□□□ -0.17
CLN6-202ENST00000538696 SRSF4Q08170 494 aaKnown RBP13.98□□□□□ -0.17
CLN6-202ENST00000538696 CT45A1Q5HYN5 189 aa13.98□□□□□ -0.17
CLN6-202ENST00000538696 GPR157Q5UAW9 335 aa13.98□□□□□ -0.17
CLN6-202ENST00000538696 LGI3Q8N145 548 aa13.98□□□□□ -0.17
CLN6-202ENST00000538696 ABHD12Q8N2K0 398 aa13.98□□□□□ -0.17
CLN6-202ENST00000538696 LRTM2Q8N967 370 aa13.98□□□□□ -0.17
CLN6-202ENST00000538696 OR11H6Q8NGC7 330 aa13.98□□□□□ -0.17
CLN6-202ENST00000538696 CT45A3Q8NHU0 189 aa13.98□□□□□ -0.17
CLN6-202ENST00000538696 FAM216AQ8WUB2 273 aa13.98□□□□□ -0.17
CLN6-202ENST00000538696 ABHD14AQ9BUJ0 271 aa13.98□□□□□ -0.17
CLN6-202ENST00000538696 SDHAF2Q9NX18 166 aa13.98□□□□□ -0.17
CLN6-202ENST00000538696 ZNRD1Q9P1U0 126 aa13.98□□□□□ -0.17
CLN6-202ENST00000538696 C13orf42A0A1B0GVH6 325 aa13.97□□□□□ -0.17
CLN6-202ENST00000538696 C5orf51A6NDU8 294 aa13.97□□□□□ -0.17
CLN6-202ENST00000538696 MPTX1A8MV57 137 aa13.97□□□□□ -0.17
CLN6-202ENST00000538696 GPR12P47775 334 aa13.97□□□□□ -0.17
CLN6-202ENST00000538696 UBE2E1P51965 193 aa13.97□□□□□ -0.17
CLN6-202ENST00000538696 RPL30P62888 115 aaKnown RBP13.97□□□□□ -0.17
CLN6-202ENST00000538696 GGNBP1Q5YKI7 109 aa13.97□□□□□ -0.17
CLN6-202ENST00000538696 GSG1LQ6UXU4 331 aa13.97□□□□□ -0.17
CLN6-202ENST00000538696 BRD3OSQ6XYD6 125 aa13.97□□□□□ -0.17
CLN6-202ENST00000538696 OR9G1Q8NH87 305 aa13.97□□□□□ -0.17
CLN6-202ENST00000538696 NANPQ8TBE9 248 aa13.97□□□□□ -0.17
CLN6-202ENST00000538696 SEC22AQ96IW7 307 aa13.97□□□□□ -0.17
CLN6-202ENST00000538696 PDCD10Q9BUL8 212 aa13.97□□□□□ -0.17
CLN6-202ENST00000538696 HIVEP2P31629 2446 aa13.97□□□□□ -0.17
CLN6-202ENST00000538696 INAFM1C9JVW0 142 aa13.96□□□□□ -0.17
CLN6-202ENST00000538696 NPFFO15130 113 aa13.96□□□□□ -0.17
CLN6-202ENST00000538696 IGLV1-47P01700 117 aa13.96□□□□□ -0.17
CLN6-202ENST00000538696 ARG1P05089 322 aa13.96□□□□□ -0.17
CLN6-202ENST00000538696 RAB7AP51149 207 aa13.96□□□□□ -0.17
CLN6-202ENST00000538696 SRPXP78539 464 aa13.96□□□□□ -0.17
CLN6-202ENST00000538696 TMEM268Q5VZI3 342 aa13.96□□□□□ -0.17
CLN6-202ENST00000538696 LYZL2Q7Z4W2 148 aa13.96□□□□□ -0.17
CLN6-202ENST00000538696 SELENOHQ8IZQ5 122 aaKnown RBP13.96□□□□□ -0.17
CLN6-202ENST00000538696 OR11H4Q8NGC9 324 aa13.96□□□□□ -0.17
CLN6-202ENST00000538696 ZNF596Q8TC21 504 aa13.96□□□□□ -0.17
CLN6-202ENST00000538696 ASB13Q8WXK3 278 aa13.96□□□□□ -0.17
CLN6-202ENST00000538696 OR10C1Q96KK4 312 aa13.96□□□□□ -0.17
CLN6-202ENST00000538696 TMEM56Q96MV1 263 aa13.96□□□□□ -0.17
CLN6-202ENST00000538696 NUP50Q9UKX7 468 aa13.96□□□□□ -0.17
CLN6-202ENST00000538696 TMEM56-RWDD3S4R434 201 aa13.96□□□□□ -0.17
CLN6-202ENST00000538696 RNF212BA8MTL3 300 aa13.95□□□□□ -0.18
CLN6-202ENST00000538696 J3QR06 171 aa13.95□□□□□ -0.18
CLN6-202ENST00000538696 PROP1O75360 226 aa13.95□□□□□ -0.18
CLN6-202ENST00000538696 HNF1AP20823 631 aa13.95□□□□□ -0.18
CLN6-202ENST00000538696 HLA-DRB5Q30154 266 aa13.95□□□□□ -0.18
CLN6-202ENST00000538696 RPL39P5Q59GN2 51 aa13.95□□□□□ -0.18
CLN6-202ENST00000538696 LDLRAD2Q5SZI1 272 aa13.95□□□□□ -0.18
CLN6-202ENST00000538696 SLC25A48Q6ZT89 311 aaKnown RBP13.95□□□□□ -0.18
CLN6-202ENST00000538696 PIP4P2Q8N4L2 257 aa13.95□□□□□ -0.18
CLN6-202ENST00000538696 LINC00311Q8N616 119 aa13.95□□□□□ -0.18
CLN6-202ENST00000538696 TEX29Q8N6K0 151 aa13.95□□□□□ -0.18
CLN6-202ENST00000538696 SLC35G3Q8N808 338 aa13.95□□□□□ -0.18
CLN6-202ENST00000538696 C8orf31Q8N9H6 132 aa13.95□□□□□ -0.18
CLN6-202ENST00000538696 BEND2Q8NDZ0 799 aa13.95□□□□□ -0.18
CLN6-202ENST00000538696 OR4P4Q8NGL7 312 aa13.95□□□□□ -0.18
CLN6-202ENST00000538696 LIN7CQ9NUP9 197 aaKnown RBP13.95□□□□□ -0.18
CLN6-202ENST00000538696 SOX21Q9Y651 276 aaPredicted RBP13.95□□□□□ -0.18
CLN6-202ENST00000538696 TRAV14DV4A0A0A6YYC5 116 aa13.94□□□□□ -0.18
CLN6-202ENST00000538696 M0R1X1 148 aa13.94□□□□□ -0.18
CLN6-202ENST00000538696 TOR1AO14656 332 aa13.94□□□□□ -0.18
CLN6-202ENST00000538696 ZNF66Q6ZN08 573 aa13.94□□□□□ -0.18
CLN6-202ENST00000538696 LHFPL4Q7Z7J7 247 aa13.94□□□□□ -0.18
CLN6-202ENST00000538696 ZNF695Q8IW36 515 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms