RNA–Protein interactions for RNA: ENST00000537934.5

SEMA4D-221, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-221ENST00000537934 MRPL13Q9BYD1 178 aaKnown RBP9.63□□□□□ -0.87
SEMA4D-221ENST00000537934 SLC7A10Q9NS82 523 aa9.63□□□□□ -0.87
SEMA4D-221ENST00000537934 SAA2-SAA4A0A096LPE2 208 aa9.63□□□□□ -0.87
SEMA4D-221ENST00000537934 C5orf63A6NC05 138 aa9.63□□□□□ -0.87
SEMA4D-221ENST00000537934 DPRXA6NFQ7 191 aa9.63□□□□□ -0.87
SEMA4D-221ENST00000537934 J3QW42 95 aa9.63□□□□□ -0.87
SEMA4D-221ENST00000537934 REG1AP05451 166 aa9.63□□□□□ -0.87
SEMA4D-221ENST00000537934 C1QTNF9P0C862 333 aa9.63□□□□□ -0.87
SEMA4D-221ENST00000537934 PSG1P11464 419 aa9.63□□□□□ -0.87
SEMA4D-221ENST00000537934 IL12BP29460 328 aa9.63□□□□□ -0.87
SEMA4D-221ENST00000537934 PRRX1P54821 245 aa9.63□□□□□ -0.87
SEMA4D-221ENST00000537934 MLF1P58340 268 aa9.63□□□□□ -0.87
SEMA4D-221ENST00000537934 RPS18P62269 152 aaKnown RBP9.63□□□□□ -0.87
SEMA4D-221ENST00000537934 ARF6P62330 175 aa9.63□□□□□ -0.87
SEMA4D-221ENST00000537934 LRRC10Q5BKY1 277 aa9.63□□□□□ -0.87
SEMA4D-221ENST00000537934 BRICD5Q6PL45 260 aa9.63□□□□□ -0.87
SEMA4D-221ENST00000537934 S100A7AQ86SG5 101 aa9.63□□□□□ -0.87
SEMA4D-221ENST00000537934 GAPTQ8N292 157 aa9.63□□□□□ -0.87
SEMA4D-221ENST00000537934 MUC15Q8N387 334 aa9.63□□□□□ -0.87
SEMA4D-221ENST00000537934 OR4C12Q96R67 309 aa9.63□□□□□ -0.87
SEMA4D-221ENST00000537934 LRFN3Q9BTN0 628 aa9.63□□□□□ -0.87
SEMA4D-221ENST00000537934 ZNF430Q9H8G1 570 aaPredicted RBP9.63□□□□□ -0.87
SEMA4D-221ENST00000537934 CHODLQ9H9P2 273 aa9.63□□□□□ -0.87
SEMA4D-221ENST00000537934 CEP250Q9BV73 2442 aa9.63□□□□□ -0.87
SEMA4D-221ENST00000537934 LOC102725191A0A1B0GVB3 256 aa9.62□□□□□ -0.87
SEMA4D-221ENST00000537934 HMGB3O15347 200 aaKnown RBP9.62□□□□□ -0.87
SEMA4D-221ENST00000537934 SMPD2O60906 423 aa9.62□□□□□ -0.87
SEMA4D-221ENST00000537934 DCAF12Q5T6F0 453 aa9.62□□□□□ -0.87
SEMA4D-221ENST00000537934 TMEM211Q6ICI0 200 aa9.62□□□□□ -0.87
SEMA4D-221ENST00000537934 NFAM1Q8NET5 270 aaPredicted RBP9.62□□□□□ -0.87
SEMA4D-221ENST00000537934 SPSB1Q96BD6 273 aa9.62□□□□□ -0.87
SEMA4D-221ENST00000537934 C10orf35Q96D05 121 aa9.62□□□□□ -0.87
SEMA4D-221ENST00000537934 GMPPAQ96IJ6 420 aaPredicted RBP9.62□□□□□ -0.87
SEMA4D-221ENST00000537934 SLC25A22Q9H936 323 aa9.62□□□□□ -0.87
SEMA4D-221ENST00000537934 PSENENQ9NZ42 101 aa9.62□□□□□ -0.87
SEMA4D-221ENST00000537934 PIGLQ9Y2B2 252 aa9.62□□□□□ -0.87
SEMA4D-221ENST00000537934 AQP7P3A6NL99 342 aa9.62□□□□□ -0.87
SEMA4D-221ENST00000537934 C11orf94C9JXX5 98 aa9.62□□□□□ -0.87
SEMA4D-221ENST00000537934 ANGPTL7O43827 346 aa9.62□□□□□ -0.87
SEMA4D-221ENST00000537934 KLF7O75840 302 aaPredicted RBP9.62□□□□□ -0.87
SEMA4D-221ENST00000537934 KITLGP21583 273 aa9.62□□□□□ -0.87
SEMA4D-221ENST00000537934 CTSSP25774 331 aa9.62□□□□□ -0.87
SEMA4D-221ENST00000537934 CDAP32320 146 aa9.62□□□□□ -0.87
SEMA4D-221ENST00000537934 GABRA2P47869 451 aa9.62□□□□□ -0.87
SEMA4D-221ENST00000537934 HLA-DQA1Q5Y7H0 255 aa9.62□□□□□ -0.87
SEMA4D-221ENST00000537934 Q6ZPA2 131 aa9.62□□□□□ -0.87
SEMA4D-221ENST00000537934 OR4F17Q8NGA8 305 aa9.62□□□□□ -0.87
SEMA4D-221ENST00000537934 STRADBQ9C0K7 418 aa9.62□□□□□ -0.87
SEMA4D-221ENST00000537934 PTPRZ1P23471 2315 aaPredicted RBP9.62□□□□□ -0.87
SEMA4D-221ENST00000537934 SDK2Q58EX2 2172 aa9.62□□□□□ -0.87
SEMA4D-221ENST00000537934 MDFIC2A0A1B0GVS7 189 aa9.62□□□□□ -0.87
SEMA4D-221ENST00000537934 H0Y980 276 aa9.62□□□□□ -0.87
SEMA4D-221ENST00000537934 PDE6DO43924 150 aa9.62□□□□□ -0.87
SEMA4D-221ENST00000537934 TRIP6Q15654 476 aaKnown RBP9.62□□□□□ -0.87
SEMA4D-221ENST00000537934 HES3Q5TGS1 186 aa9.62□□□□□ -0.87
SEMA4D-221ENST00000537934 RAET1LQ5VY80 246 aa9.62□□□□□ -0.87
SEMA4D-221ENST00000537934 Q6ZSR3 168 aa9.62□□□□□ -0.87
SEMA4D-221ENST00000537934 NIT1Q86X76 327 aa9.62□□□□□ -0.87
SEMA4D-221ENST00000537934 ZFHX4Q86UP3 3567 aa9.61□□□□□ -0.87
SEMA4D-221ENST00000537934 FAM186AA6NE01 2351 aa9.61□□□□□ -0.87
SEMA4D-221ENST00000537934 SHANK1Q9Y566 2161 aa9.61□□□□□ -0.87
SEMA4D-221ENST00000537934 DCHS1Q96JQ0 3298 aa9.61□□□□□ -0.87
SEMA4D-221ENST00000537934 LOC102724200A0A096LPH7 203 aaPredicted RBP9.61□□□□□ -0.87
SEMA4D-221ENST00000537934 A0A0G2JRQ6 117 aa9.61□□□□□ -0.87
SEMA4D-221ENST00000537934 ZNF891A8MT65 544 aaPredicted RBP9.61□□□□□ -0.87
SEMA4D-221ENST00000537934 SYNGR2O43760 224 aa9.61□□□□□ -0.87
SEMA4D-221ENST00000537934 MT-CO3P00414 261 aa9.61□□□□□ -0.87
SEMA4D-221ENST00000537934 AMTP48728 403 aa9.61□□□□□ -0.87
SEMA4D-221ENST00000537934 CLRN1P58418 232 aa9.61□□□□□ -0.87
SEMA4D-221ENST00000537934 ARG2P78540 354 aa9.61□□□□□ -0.87
SEMA4D-221ENST00000537934 PLCXD2Q0VAA5 305 aa9.61□□□□□ -0.87
SEMA4D-221ENST00000537934 ACSM6Q6P461 480 aa9.61□□□□□ -0.87
SEMA4D-221ENST00000537934 ZNF441Q8N8Z8 693 aa9.61□□□□□ -0.87
SEMA4D-221ENST00000537934 DEFB124Q8NES8 71 aa9.61□□□□□ -0.87
SEMA4D-221ENST00000537934 OR2M3Q8NG83 312 aa9.61□□□□□ -0.87
SEMA4D-221ENST00000537934 OR10V1Q8NGI7 309 aa9.61□□□□□ -0.87
SEMA4D-221ENST00000537934 ZNF596Q8TC21 504 aa9.61□□□□□ -0.87
SEMA4D-221ENST00000537934 GPHA2Q96T91 129 aa9.61□□□□□ -0.87
SEMA4D-221ENST00000537934 WNT10AQ9GZT5 417 aa9.61□□□□□ -0.87
SEMA4D-221ENST00000537934 GNB4Q9HAV0 340 aa9.61□□□□□ -0.87
SEMA4D-221ENST00000537934 PIGBOS1A0A0B4J2F0 54 aa9.61□□□□□ -0.87
SEMA4D-221ENST00000537934 C9orf172C9J069 976 aa9.61□□□□□ -0.87
SEMA4D-221ENST00000537934 FCN1O00602 326 aa9.61□□□□□ -0.87
SEMA4D-221ENST00000537934 RBFOX2O43251 390 aaKnown RBP eCLIP9.61□□□□□ -0.87
SEMA4D-221ENST00000537934 SPRY1O43609 319 aaPredicted RBP9.61□□□□□ -0.87
SEMA4D-221ENST00000537934 TOX4O94842 621 aa9.61□□□□□ -0.87
SEMA4D-221ENST00000537934 C3orf79P0CE67 100 aa9.61□□□□□ -0.87
SEMA4D-221ENST00000537934 GNB1P62873 340 aa9.61□□□□□ -0.87
SEMA4D-221ENST00000537934 PSG4Q00888 419 aa9.61□□□□□ -0.87
SEMA4D-221ENST00000537934 ZNF90Q03938 601 aa9.61□□□□□ -0.87
SEMA4D-221ENST00000537934 MFAP5Q13361 173 aa9.61□□□□□ -0.87
SEMA4D-221ENST00000537934 PMCHL1Q16048 86 aa9.61□□□□□ -0.87
SEMA4D-221ENST00000537934 HLA-DRB5Q30154 266 aa9.61□□□□□ -0.87
SEMA4D-221ENST00000537934 OR4A47Q6IF82 309 aa9.61□□□□□ -0.87
SEMA4D-221ENST00000537934 OR10G9Q8NGN4 311 aa9.61□□□□□ -0.87
SEMA4D-221ENST00000537934 OR10G7Q8NGN6 311 aa9.61□□□□□ -0.87
SEMA4D-221ENST00000537934 KCNS1Q96KK3 526 aa9.61□□□□□ -0.87
SEMA4D-221ENST00000537934 WDR54Q9H977 334 aa9.61□□□□□ -0.87
SEMA4D-221ENST00000537934 URB1O60287 2271 aaKnown RBP9.6□□□□□ -0.87
SEMA4D-221ENST00000537934 IGHG1P01857 330 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms