RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 GZMBP10144 247 aa2.44□□□□□ -2.02
PRKDC-208ENST00000536710 CSRP1P21291 193 aaKnown RBP2.44□□□□□ -2.02
PRKDC-208ENST00000536710 RPS12P25398 132 aaKnown RBP2.44□□□□□ -2.02
PRKDC-208ENST00000536710 LRRN1Q6UXK5 716 aa2.44□□□□□ -2.02
PRKDC-208ENST00000536710 DAND5Q8N907 189 aa2.44□□□□□ -2.02
PRKDC-208ENST00000536710 RPS4Y2Q8TD47 263 aa2.44□□□□□ -2.02
PRKDC-208ENST00000536710 HAVCR2Q8TDQ0 301 aa2.44□□□□□ -2.02
PRKDC-208ENST00000536710 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.44□□□□□ -2.02
PRKDC-208ENST00000536710 MIEN1Q9BRT3 115 aa2.44□□□□□ -2.02
PRKDC-208ENST00000536710 CCL26Q9Y258 94 aa2.44□□□□□ -2.02
PRKDC-208ENST00000536710 TRGV4A0A0C4DH28 118 aa2.43□□□□□ -2.02
PRKDC-208ENST00000536710 C17orf51A8MQB3 221 aa2.43□□□□□ -2.02
PRKDC-208ENST00000536710 FNDC10F2Z333 226 aa2.43□□□□□ -2.02
PRKDC-208ENST00000536710 H3BPC8 53 aa2.43□□□□□ -2.02
PRKDC-208ENST00000536710 NIPSNAP2O75323 286 aa2.43□□□□□ -2.02
PRKDC-208ENST00000536710 REG1AP05451 166 aa2.43□□□□□ -2.02
PRKDC-208ENST00000536710 CCL3P10147 92 aa2.43□□□□□ -2.02
PRKDC-208ENST00000536710 DDTP30046 118 aa2.43□□□□□ -2.02
PRKDC-208ENST00000536710 GABRA4P48169 554 aa2.43□□□□□ -2.02
PRKDC-208ENST00000536710 GNA12Q03113 381 aa2.43□□□□□ -2.02
PRKDC-208ENST00000536710 RSU1Q15404 277 aa2.43□□□□□ -2.02
PRKDC-208ENST00000536710 HIST2H3AQ71DI3 136 aa2.43□□□□□ -2.02
PRKDC-208ENST00000536710 KRTAP13-1Q8IUC0 172 aa2.43□□□□□ -2.02
PRKDC-208ENST00000536710 PACRGLQ8N7B6 248 aa2.43□□□□□ -2.02
PRKDC-208ENST00000536710 UBL4BQ8N7F7 174 aa2.43□□□□□ -2.02
PRKDC-208ENST00000536710 TMEM161BQ8NDZ6 487 aa2.43□□□□□ -2.02
PRKDC-208ENST00000536710 FGF13Q92913 245 aa2.43□□□□□ -2.02
PRKDC-208ENST00000536710 RAB8BQ92930 207 aa2.43□□□□□ -2.02
PRKDC-208ENST00000536710 ABCC11Q96J66 1382 aa2.43□□□□□ -2.02
PRKDC-208ENST00000536710 PLCH2O75038 1416 aa2.42□□□□□ -2.02
PRKDC-208ENST00000536710 TRPM3Q9HCF6 1732 aaPredicted RBP2.42□□□□□ -2.02
PRKDC-208ENST00000536710 NOTCH2Q04721 2471 aa2.42□□□□□ -2.02
PRKDC-208ENST00000536710 IGHV1-69P01742 117 aa2.42□□□□□ -2.02
PRKDC-208ENST00000536710 SAPCD1Q5SSQ6 148 aa2.42□□□□□ -2.02
PRKDC-208ENST00000536710 C2orf91Q6ZV80 131 aa2.42□□□□□ -2.02
PRKDC-208ENST00000536710 ZCCHC13Q8WW36 166 aaKnown RBP2.42□□□□□ -2.02
PRKDC-208ENST00000536710 FKBP14Q9NWM8 211 aa2.42□□□□□ -2.02
PRKDC-208ENST00000536710 SHANK3Q9BYB0 1731 aa2.42□□□□□ -2.02
PRKDC-208ENST00000536710 OR6C6A6NF89 314 aa2.41□□□□□ -2.02
PRKDC-208ENST00000536710 OR5K4A6NMS3 321 aa2.41□□□□□ -2.02
PRKDC-208ENST00000536710 C21orf140B9A014 251 aa2.41□□□□□ -2.02
PRKDC-208ENST00000536710 ZNF189O75820 626 aaPredicted RBP2.41□□□□□ -2.02
PRKDC-208ENST00000536710 AP2S1P53680 142 aaPredicted RBP2.41□□□□□ -2.02
PRKDC-208ENST00000536710 HOXC5Q00444 222 aa2.41□□□□□ -2.02
PRKDC-208ENST00000536710 UAP1Q16222 522 aaPredicted RBP2.41□□□□□ -2.02
PRKDC-208ENST00000536710 LCE1CQ5T751 118 aa2.41□□□□□ -2.02
PRKDC-208ENST00000536710 LCE1BQ5T7P3 118 aa2.41□□□□□ -2.02
PRKDC-208ENST00000536710 C1orf195Q5TG92 126 aa2.41□□□□□ -2.02
PRKDC-208ENST00000536710 FAM78BQ5VT40 261 aa2.41□□□□□ -2.02
PRKDC-208ENST00000536710 LGALS9CQ6DKI2 356 aa2.41□□□□□ -2.02
PRKDC-208ENST00000536710 ZNF767PQ75MW2 155 aa2.41□□□□□ -2.02
PRKDC-208ENST00000536710 GLT6D1Q7Z4J2 308 aa2.41□□□□□ -2.02
PRKDC-208ENST00000536710 CNEP1R1Q8N9A8 125 aa2.41□□□□□ -2.02
PRKDC-208ENST00000536710 JOSD2Q8TAC2 188 aa2.41□□□□□ -2.02
PRKDC-208ENST00000536710 NMNAT3Q96T66 252 aa2.41□□□□□ -2.02
PRKDC-208ENST00000536710 PSORS1C2Q9UIG4 136 aa2.41□□□□□ -2.02
PRKDC-208ENST00000536710 CC2D2AQ9P2K1 1620 aa2.41□□□□□ -2.02
PRKDC-208ENST00000536710 ADAMTSL1Q8N6G6 1762 aa2.41□□□□□ -2.02
PRKDC-208ENST00000536710 MDFIC2A0A1B0GVS7 189 aa2.4□□□□□ -2.03
PRKDC-208ENST00000536710 TMEM235A6NFC5 223 aa2.4□□□□□ -2.03
PRKDC-208ENST00000536710 C11orf86A6NJI1 115 aa2.4□□□□□ -2.03
PRKDC-208ENST00000536710 PLXNB1O43157 2135 aa2.4□□□□□ -2.03
PRKDC-208ENST00000536710 TAS2R30P59541 319 aa2.4□□□□□ -2.03
PRKDC-208ENST00000536710 CLVS2Q5SYC1 327 aa2.4□□□□□ -2.03
PRKDC-208ENST00000536710 PTRHD1Q6GMV3 140 aaKnown RBP2.4□□□□□ -2.03
PRKDC-208ENST00000536710 SBSNQ6UWP8 590 aa2.4□□□□□ -2.03
PRKDC-208ENST00000536710 OR4X1Q8NH49 305 aa2.4□□□□□ -2.03
PRKDC-208ENST00000536710 RAB2BQ8WUD1 216 aa2.4□□□□□ -2.03
PRKDC-208ENST00000536710 RNF133Q8WVZ7 376 aa2.4□□□□□ -2.03
PRKDC-208ENST00000536710 SFRP2Q96HF1 295 aa2.4□□□□□ -2.03
PRKDC-208ENST00000536710 SLC35G5Q96KT7 338 aa2.4□□□□□ -2.03
PRKDC-208ENST00000536710 PECRQ9BY49 303 aa2.4□□□□□ -2.03
PRKDC-208ENST00000536710 PARVGQ9HBI0 331 aa2.4□□□□□ -2.03
PRKDC-208ENST00000536710 C3orf18Q9UK00 162 aa2.4□□□□□ -2.03
PRKDC-208ENST00000536710 SCRIBQ14160 1630 aa2.39□□□□□ -2.03
PRKDC-208ENST00000536710 KNCNA6PVL3 124 aa2.39□□□□□ -2.03
PRKDC-208ENST00000536710 TXNDC9O14530 226 aa2.39□□□□□ -2.03
PRKDC-208ENST00000536710 ALOX5APP20292 161 aa2.39□□□□□ -2.03
PRKDC-208ENST00000536710 GABRA2P47869 451 aa2.39□□□□□ -2.03
PRKDC-208ENST00000536710 REG1BP48304 166 aa2.39□□□□□ -2.03
PRKDC-208ENST00000536710 HINT1P49773 126 aaPredicted RBP2.39□□□□□ -2.03
PRKDC-208ENST00000536710 MAGOHP61326 146 aaKnown RBP2.39□□□□□ -2.03
PRKDC-208ENST00000536710 TBPL1P62380 186 aa2.39□□□□□ -2.03
PRKDC-208ENST00000536710 PLPPR5Q32ZL2 321 aa2.39□□□□□ -2.03
PRKDC-208ENST00000536710 COQ5Q5HYK3 327 aa2.39□□□□□ -2.03
PRKDC-208ENST00000536710 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.39□□□□□ -2.03
PRKDC-208ENST00000536710 OR10K2Q6IF99 312 aa2.39□□□□□ -2.03
PRKDC-208ENST00000536710 SPATA12Q7Z6I5 190 aa2.39□□□□□ -2.03
PRKDC-208ENST00000536710 OR13C8Q8NGS7 320 aa2.39□□□□□ -2.03
PRKDC-208ENST00000536710 OR2T27Q8NH04 317 aa2.39□□□□□ -2.03
PRKDC-208ENST00000536710 MRPS26Q9BYN8 205 aaKnown RBP2.39□□□□□ -2.03
PRKDC-208ENST00000536710 KRTAP4-3Q9BYR4 195 aa2.39□□□□□ -2.03
PRKDC-208ENST00000536710 HRASLSQ9HDD0 168 aa2.39□□□□□ -2.03
PRKDC-208ENST00000536710 UBAP1Q9NZ09 502 aa2.39□□□□□ -2.03
PRKDC-208ENST00000536710 CHD2O14647 1828 aaKnown RBP2.39□□□□□ -2.03
PRKDC-208ENST00000536710 EVC2Q86UK5 1308 aa2.39□□□□□ -2.03
PRKDC-208ENST00000536710 COL5A1P20908 1838 aaPredicted RBP2.38□□□□□ -2.03
PRKDC-208ENST00000536710 A0A1W2PQL4 384 aaPredicted RBP2.38□□□□□ -2.03
PRKDC-208ENST00000536710 NDUFB2O95178 105 aa2.38□□□□□ -2.03
PRKDC-208ENST00000536710 ISG15P05161 165 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms