RNA–Protein interactions for RNA: ENST00000536661.1

UBC-204, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-204ENST00000536661 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.63□□□□□ -0.558e-7■□□□□ 8.6
UBC-204ENST00000536661 TPSG1Q9NRR2 321 aa11.63□□□□□ -0.55
UBC-204ENST00000536661 SDHAF2Q9NX18 166 aa11.63□□□□□ -0.55
UBC-204ENST00000536661 SSR3Q9UNL2 185 aa11.63□□□□□ -0.55
UBC-204ENST00000536661 A3GALT2U3KPV4 340 aa11.63□□□□□ -0.55
UBC-204ENST00000536661 COL7A1Q02388 2944 aa11.63□□□□□ -0.55
UBC-204ENST00000536661 I3L521 148 aa11.62□□□□□ -0.55
UBC-204ENST00000536661 SPDEFO95238 335 aa11.62□□□□□ -0.55
UBC-204ENST00000536661 DIRAS3O95661 229 aa11.62□□□□□ -0.55
UBC-204ENST00000536661 CA2P00918 260 aa11.62□□□□□ -0.55
UBC-204ENST00000536661 RAB9AP51151 201 aa11.62□□□□□ -0.55
UBC-204ENST00000536661 GNB1P62873 340 aa11.62□□□□□ -0.55
UBC-204ENST00000536661 TPRA1Q86W33 373 aa11.62□□□□□ -0.55
UBC-204ENST00000536661 OR11H1Q8NG94 326 aa11.62□□□□□ -0.55
UBC-204ENST00000536661 LGALS14Q8TCE9 139 aa11.62□□□□□ -0.55
UBC-204ENST00000536661 ABHD5Q8WTS1 349 aa11.62□□□□□ -0.55
UBC-204ENST00000536661 CASTOR1Q8WTX7 329 aa11.62□□□□□ -0.55
UBC-204ENST00000536661 OR5B12Q96R08 314 aa11.62□□□□□ -0.55
UBC-204ENST00000536661 TSNAXQ99598 290 aaKnown RBP11.62□□□□□ -0.55
UBC-204ENST00000536661 FAM103A1Q9BTL3 118 aaKnown RBP11.62□□□□□ -0.55
UBC-204ENST00000536661 SLC35D1Q9NTN3 355 aa11.62□□□□□ -0.55
UBC-204ENST00000536661 DAPK2Q9UIK4 370 aa11.62□□□□□ -0.55
UBC-204ENST00000536661 FOXA2Q9Y261 457 aaPredicted RBP11.62□□□□□ -0.55
UBC-204ENST00000536661 VSIG4Q9Y279 399 aa11.62□□□□□ -0.55
UBC-204ENST00000536661 RRP15Q9Y3B9 282 aaKnown RBP11.62□□□□□ -0.55
UBC-204ENST00000536661 NUBP2Q9Y5Y2 271 aa11.62□□□□□ -0.55
UBC-204ENST00000536661 SLC25A17O43808 307 aa11.61□□□□□ -0.55
UBC-204ENST00000536661 TALDO1P37837 337 aa11.61□□□□□ -0.55
UBC-204ENST00000536661 RPS16P62249 146 aaKnown RBP11.61□□□□□ -0.55
UBC-204ENST00000536661 RUNX1Q01196 453 aa11.61□□□□□ -0.55
UBC-204ENST00000536661 NEDD8Q15843 81 aa11.61□□□□□ -0.55
UBC-204ENST00000536661 SRSF7Q16629 238 aaKnown RBP eCLIP11.61□□□□□ -0.551e-6■□□□□ 9.8
UBC-204ENST00000536661 SFXN4Q6P4A7 337 aa11.61□□□□□ -0.55
UBC-204ENST00000536661 Q6ZS49 121 aa11.61□□□□□ -0.55
UBC-204ENST00000536661 PPP1R27Q86WC6 154 aa11.61□□□□□ -0.55
UBC-204ENST00000536661 FLYWCH2Q96CP2 140 aaKnown RBP11.61□□□□□ -0.55
UBC-204ENST00000536661 GINS4Q9BRT9 223 aa11.61□□□□□ -0.55
UBC-204ENST00000536661 RNF167Q9H6Y7 350 aa11.61□□□□□ -0.55
UBC-204ENST00000536661 TMEM235A6NFC5 223 aa11.6□□□□□ -0.55
UBC-204ENST00000536661 SEC14L6B5MCN3 397 aa11.6□□□□□ -0.55
UBC-204ENST00000536661 CLEC2LP0C7M8 214 aa11.6□□□□□ -0.55
UBC-204ENST00000536661 DTYMKP23919 212 aa11.6□□□□□ -0.55
UBC-204ENST00000536661 SDC2P34741 201 aa11.6□□□□□ -0.55
UBC-204ENST00000536661 MXD1Q05195 221 aa11.6□□□□□ -0.55
UBC-204ENST00000536661 ARL6IP1Q15041 203 aa11.6□□□□□ -0.55
UBC-204ENST00000536661 CDNFQ49AH0 187 aa11.6□□□□□ -0.55
UBC-204ENST00000536661 DEFB121Q5J5C9 76 aa11.6□□□□□ -0.55
UBC-204ENST00000536661 C9orf66Q5T8R8 295 aa11.6□□□□□ -0.55
UBC-204ENST00000536661 UNQ5815/PRO19632Q6UWF5 114 aa11.6□□□□□ -0.55
UBC-204ENST00000536661 H1FOOQ8IZA3 346 aaPredicted RBP11.6□□□□□ -0.55
UBC-204ENST00000536661 TCTEX1D1Q8N7M0 179 aa11.6□□□□□ -0.55
UBC-204ENST00000536661 OR1N2Q8NGR9 330 aa11.6□□□□□ -0.55
UBC-204ENST00000536661 NUDCD2Q8WVJ2 157 aa11.6□□□□□ -0.55
UBC-204ENST00000536661 ALX4Q9H161 411 aaPredicted RBP11.6□□□□□ -0.55
UBC-204ENST00000536661 LOC100506127A0A0U1RQW1 187 aa11.59□□□□□ -0.55
UBC-204ENST00000536661 ARPC1BO15143 372 aaKnown RBP11.59□□□□□ -0.55
UBC-204ENST00000536661 IGLV2-23P01705 113 aa11.59□□□□□ -0.55
UBC-204ENST00000536661 OR8U8P0C7N1 319 aa11.59□□□□□ -0.55
UBC-204ENST00000536661 SSBP2P81877 361 aaPredicted RBP11.59□□□□□ -0.55
UBC-204ENST00000536661 DGCR2P98153 550 aa11.59□□□□□ -0.55
UBC-204ENST00000536661 ZNF616Q08AN1 781 aa11.59□□□□□ -0.55
UBC-204ENST00000536661 TMEM267Q0VDI3 215 aaPredicted RBP11.59□□□□□ -0.55
UBC-204ENST00000536661 KCTD21Q4G0X4 260 aa11.59□□□□□ -0.55
UBC-204ENST00000536661 ACTBL2Q562R1 376 aa11.59□□□□□ -0.55
UBC-204ENST00000536661 HACD4Q5VWC8 232 aa11.59□□□□□ -0.55
UBC-204ENST00000536661 ZNF562Q6V9R5 426 aa11.59□□□□□ -0.55
UBC-204ENST00000536661 LFNGQ8NES3 379 aa11.59□□□□□ -0.55
UBC-204ENST00000536661 ARPC1AQ92747 370 aa11.59□□□□□ -0.55
UBC-204ENST00000536661 HARBI1Q96MB7 349 aa11.59□□□□□ -0.55
UBC-204ENST00000536661 RBM7Q9Y580 266 aaKnown RBP11.59□□□□□ -0.55
UBC-204ENST00000536661 CRYGBP07316 175 aa11.58□□□□□ -0.56
UBC-204ENST00000536661 CD36P16671 472 aa11.58□□□□□ -0.56
UBC-204ENST00000536661 FXYD3Q14802 87 aa11.58□□□□□ -0.56
UBC-204ENST00000536661 ZNF260Q3ZCT1 412 aa11.58□□□□□ -0.56
UBC-204ENST00000536661 AKIRIN2Q53H80 203 aa11.58□□□□□ -0.56
UBC-204ENST00000536661 BVESQ8NE79 360 aa11.58□□□□□ -0.56
UBC-204ENST00000536661 OR5H6Q8NGV6 325 aa11.58□□□□□ -0.56
UBC-204ENST00000536661 GRPEL2Q8TAA5 225 aa11.58□□□□□ -0.56
UBC-204ENST00000536661 CENPOQ9BU64 300 aa11.58□□□□□ -0.56
UBC-204ENST00000536661 ST6GALNAC5Q9BVH7 336 aa11.58□□□□□ -0.56
UBC-204ENST00000536661 RHBDL2Q9NX52 303 aa11.58□□□□□ -0.56
UBC-204ENST00000536661 SCOCQ9UIL1 159 aa11.58□□□□□ -0.56
UBC-204ENST00000536661 SSX5O60225 188 aa11.57□□□□□ -0.56
UBC-204ENST00000536661 SCGNO76038 276 aa11.57□□□□□ -0.56
UBC-204ENST00000536661 LGALS1P09382 135 aaKnown RBP11.57□□□□□ -0.56
UBC-204ENST00000536661 GNG2P59768 71 aa11.57□□□□□ -0.56
UBC-204ENST00000536661 PJVKQ0ZLH3 352 aa11.57□□□□□ -0.56
UBC-204ENST00000536661 TMEM177Q53S58 311 aa11.57□□□□□ -0.56
UBC-204ENST00000536661 PYHIN1Q6K0P9 492 aa11.57□□□□□ -0.56
UBC-204ENST00000536661 DDB2Q92466 427 aa11.57□□□□□ -0.56
UBC-204ENST00000536661 SLC25A38Q96DW6 304 aa11.57□□□□□ -0.56
UBC-204ENST00000536661 MS4A10Q96PG2 267 aa11.57□□□□□ -0.56
UBC-204ENST00000536661 ZMAT5Q9UDW3 170 aaKnown RBP11.57□□□□□ -0.56
UBC-204ENST00000536661 IGHV4OR15-8A0A075B7B6 117 aa11.56□□□□□ -0.56
UBC-204ENST00000536661 A0A087WW49 117 aa11.56□□□□□ -0.56
UBC-204ENST00000536661 SRRM4A7MD48 611 aaKnown RBP11.56□□□□□ -0.56
UBC-204ENST00000536661 LINC00473A8K010 186 aa11.56□□□□□ -0.56
UBC-204ENST00000536661 J3QRK9 145 aa11.56□□□□□ -0.56
UBC-204ENST00000536661 SHOXO15266 292 aa11.56□□□□□ -0.56
UBC-204ENST00000536661 RAMP3O60896 148 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms