RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 RPL23AP62750 156 aaKnown RBP9.75□□□□□ -0.85
PRKDC-207ENST00000536483 FOXE3Q13461 319 aa9.75□□□□□ -0.85
PRKDC-207ENST00000536483 C5orf64Q2M2E5 130 aa9.75□□□□□ -0.85
PRKDC-207ENST00000536483 SFXN4Q6P4A7 337 aa9.75□□□□□ -0.85
PRKDC-207ENST00000536483 TEX38Q6PEX7 206 aa9.75□□□□□ -0.85
PRKDC-207ENST00000536483 C8orf86Q6ZUL3 223 aa9.75□□□□□ -0.85
PRKDC-207ENST00000536483 CCDC190Q86UF4 302 aa9.75□□□□□ -0.85
PRKDC-207ENST00000536483 SETD6Q8TBK2 473 aa9.75□□□□□ -0.85
PRKDC-207ENST00000536483 ACOT12Q8WYK0 555 aa9.75□□□□□ -0.85
PRKDC-207ENST00000536483 RITA1Q96K30 269 aa9.75□□□□□ -0.85
PRKDC-207ENST00000536483 HSPB9Q9BQS6 159 aa9.75□□□□□ -0.85
PRKDC-207ENST00000536483 C6orf62Q9GZU0 229 aaPredicted RBP9.75□□□□□ -0.85
PRKDC-207ENST00000536483 LINC00527Q9UJ94 153 aa9.75□□□□□ -0.85
PRKDC-207ENST00000536483 A0A0A6YYH2 397 aa9.74□□□□□ -0.85
PRKDC-207ENST00000536483 A6NJ64 397 aa9.74□□□□□ -0.85
PRKDC-207ENST00000536483 NBR2O15453 112 aa9.74□□□□□ -0.85
PRKDC-207ENST00000536483 HSPA12AO43301 675 aa9.74□□□□□ -0.85
PRKDC-207ENST00000536483 UPK1BO75841 260 aa9.74□□□□□ -0.85
PRKDC-207ENST00000536483 GSTP1P09211 210 aaKnown RBP9.74□□□□□ -0.85
PRKDC-207ENST00000536483 OR5H8P0DN80 308 aa9.74□□□□□ -0.85
PRKDC-207ENST00000536483 GNB3P16520 340 aa9.74□□□□□ -0.85
PRKDC-207ENST00000536483 PPIFP30405 207 aaKnown RBP9.74□□□□□ -0.85
PRKDC-207ENST00000536483 RPS19P39019 145 aaKnown RBP9.74□□□□□ -0.85
PRKDC-207ENST00000536483 DEFA1P59665 94 aa9.74□□□□□ -0.85
PRKDC-207ENST00000536483 DEFA3P59666 94 aa9.74□□□□□ -0.85
PRKDC-207ENST00000536483 MRPS15P82914 257 aaKnown RBP9.74□□□□□ -0.85
PRKDC-207ENST00000536483 OXA1LQ15070 435 aa9.74□□□□□ -0.85
PRKDC-207ENST00000536483 MMDQ15546 238 aa9.74□□□□□ -0.85
PRKDC-207ENST00000536483 RPL39P5Q59GN2 51 aa9.74□□□□□ -0.85
PRKDC-207ENST00000536483 HACD4Q5VWC8 232 aa9.74□□□□□ -0.85
PRKDC-207ENST00000536483 MYOZ3Q8TDC0 251 aa9.74□□□□□ -0.85
PRKDC-207ENST00000536483 KCTD12Q96CX2 325 aaKnown RBP9.74□□□□□ -0.85
PRKDC-207ENST00000536483 ABHD14BQ96IU4 210 aa9.74□□□□□ -0.85
PRKDC-207ENST00000536483 MCRIP2Q9BUT9 160 aaKnown RBP9.74□□□□□ -0.85
PRKDC-207ENST00000536483 RDH8Q9NYR8 311 aa9.74□□□□□ -0.85
PRKDC-207ENST00000536483 ADAM30Q9UKF2 790 aa9.74□□□□□ -0.85
PRKDC-207ENST00000536483 ETV7Q9Y603 341 aa9.74□□□□□ -0.85
PRKDC-207ENST00000536483 NUDT19A8MXV4 375 aa9.73□□□□□ -0.85
PRKDC-207ENST00000536483 J3QRK9 145 aa9.73□□□□□ -0.85
PRKDC-207ENST00000536483 GSTT2P0CG29 244 aa9.73□□□□□ -0.85
PRKDC-207ENST00000536483 GSTT2BP0CG30 244 aa9.73□□□□□ -0.85
PRKDC-207ENST00000536483 PSMB8P28062 276 aa9.73□□□□□ -0.85
PRKDC-207ENST00000536483 MYCNOSP40205 109 aa9.73□□□□□ -0.85
PRKDC-207ENST00000536483 CDX1P47902 265 aaPredicted RBP9.73□□□□□ -0.85
PRKDC-207ENST00000536483 PITPNAQ00169 270 aa9.73□□□□□ -0.85
PRKDC-207ENST00000536483 TAGLNQ01995 201 aaKnown RBP9.73□□□□□ -0.85
PRKDC-207ENST00000536483 TRIM16LQ309B1 348 aa9.73□□□□□ -0.85
PRKDC-207ENST00000536483 ZNF260Q3ZCT1 412 aa9.73□□□□□ -0.85
PRKDC-207ENST00000536483 CDNFQ49AH0 187 aa9.73□□□□□ -0.85
PRKDC-207ENST00000536483 C19orf54Q5BKX5 351 aa9.73□□□□□ -0.85
PRKDC-207ENST00000536483 IGSF11Q5DX21 431 aa9.73□□□□□ -0.85
PRKDC-207ENST00000536483 MZT2AQ6P582 158 aa9.73□□□□□ -0.85
PRKDC-207ENST00000536483 CENPSQ8N2Z9 138 aa9.73□□□□□ -0.85
PRKDC-207ENST00000536483 KLHL30-AS1Q8NEE0 82 aa9.73□□□□□ -0.85
PRKDC-207ENST00000536483 DUX3Q96PT4 197 aa9.73□□□□□ -0.85
PRKDC-207ENST00000536483 P2RX4Q99571 388 aa9.73□□□□□ -0.85
PRKDC-207ENST00000536483 ATG5Q9H1Y0 275 aa9.73□□□□□ -0.85
PRKDC-207ENST00000536483 OR51J1Q9H342 316 aa9.73□□□□□ -0.85
PRKDC-207ENST00000536483 ZNF107Q9UII5 783 aaPredicted RBP9.73□□□□□ -0.85
PRKDC-207ENST00000536483 DAPK2Q9UIK4 370 aa9.73□□□□□ -0.85
PRKDC-207ENST00000536483 WASHC3Q9Y3C0 194 aa9.73□□□□□ -0.85
PRKDC-207ENST00000536483 IGHV7-81A0A0B4J1V7 117 aa9.72□□□□□ -0.85
PRKDC-207ENST00000536483 PFDN1O60925 122 aa9.72□□□□□ -0.85
PRKDC-207ENST00000536483 IGLV1-40P01703 118 aa9.72□□□□□ -0.85
PRKDC-207ENST00000536483 CTXN2P0C2S0 81 aa9.72□□□□□ -0.85
PRKDC-207ENST00000536483 CNTFRP26992 372 aa9.72□□□□□ -0.85
PRKDC-207ENST00000536483 DGCR2P98153 550 aa9.72□□□□□ -0.85
PRKDC-207ENST00000536483 ZNF660Q6AZW8 331 aaPredicted RBP9.72□□□□□ -0.85
PRKDC-207ENST00000536483 LIN54Q6MZP7 749 aa9.72□□□□□ -0.85
PRKDC-207ENST00000536483 FAM131AQ6UXB0 335 aa9.72□□□□□ -0.85
PRKDC-207ENST00000536483 ZNF383Q8NA42 475 aa9.72□□□□□ -0.85
PRKDC-207ENST00000536483 OR10J5Q8NHC4 309 aa9.72□□□□□ -0.85
PRKDC-207ENST00000536483 RNF167Q9H6Y7 350 aa9.72□□□□□ -0.85
PRKDC-207ENST00000536483 RHBDL2Q9NX52 303 aa9.72□□□□□ -0.85
PRKDC-207ENST00000536483 RABL2AQ9UBK7 228 aaPredicted RBP9.72□□□□□ -0.85
PRKDC-207ENST00000536483 ZNF221Q9UK13 617 aa9.72□□□□□ -0.85
PRKDC-207ENST00000536483 RABL2BQ9UNT1 228 aa9.72□□□□□ -0.85
PRKDC-207ENST00000536483 IGKV1D-8A0A087WSZ0 117 aa9.71□□□□□ -0.86
PRKDC-207ENST00000536483 A0A1B0GVG6 124 aa9.71□□□□□ -0.86
PRKDC-207ENST00000536483 RRHO14718 337 aa9.71□□□□□ -0.86
PRKDC-207ENST00000536483 SPDEFO95238 335 aa9.71□□□□□ -0.86
PRKDC-207ENST00000536483 PTTG1O95997 202 aa9.71□□□□□ -0.86
PRKDC-207ENST00000536483 CLEC2LP0C7M8 214 aa9.71□□□□□ -0.86
PRKDC-207ENST00000536483 SNRPBP14678 240 aaKnown RBP9.71□□□□□ -0.86
PRKDC-207ENST00000536483 TNFSF8P32971 234 aa9.71□□□□□ -0.86
PRKDC-207ENST00000536483 TGFBR1P36897 503 aa9.71□□□□□ -0.86
PRKDC-207ENST00000536483 TALDO1P37837 337 aa9.71□□□□□ -0.86
PRKDC-207ENST00000536483 ARFRP1Q13795 201 aa9.71□□□□□ -0.86
PRKDC-207ENST00000536483 KIAA0141Q14154 515 aaPredicted RBP9.71□□□□□ -0.86
PRKDC-207ENST00000536483 PDPNQ86YL7 162 aa9.71□□□□□ -0.86
PRKDC-207ENST00000536483 ZNF695Q8IW36 515 aa9.71□□□□□ -0.86
PRKDC-207ENST00000536483 H1FOOQ8IZA3 346 aaPredicted RBP9.71□□□□□ -0.86
PRKDC-207ENST00000536483 GDPD1Q8N9F7 314 aa9.71□□□□□ -0.86
PRKDC-207ENST00000536483 LGALS14Q8TCE9 139 aa9.71□□□□□ -0.86
PRKDC-207ENST00000536483 SLC25A38Q96DW6 304 aa9.71□□□□□ -0.86
PRKDC-207ENST00000536483 RBMXL1Q96E39 390 aaKnown RBP9.71□□□□□ -0.86
PRKDC-207ENST00000536483 KIAA1456Q9P272 454 aa9.71□□□□□ -0.86
PRKDC-207ENST00000536483 ZNF230Q9UIE0 474 aaPredicted RBP9.71□□□□□ -0.86
PRKDC-207ENST00000536483 ELF5Q9UKW6 265 aaPredicted RBP9.71□□□□□ -0.86
PRKDC-207ENST00000536483 RNF150Q9ULK6 438 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms