RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 KIAA0141Q14154 515 aaPredicted RBP11.14□□□□□ -0.63
UBE3B-206ENST00000536398 ARL6IP1Q15041 203 aa11.14□□□□□ -0.63
UBE3B-206ENST00000536398 PLGLAQ15195 96 aa11.14□□□□□ -0.63
UBE3B-206ENST00000536398 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.14□□□□□ -0.63
UBE3B-206ENST00000536398 CASTOR1Q8WTX7 329 aa11.14□□□□□ -0.63
UBE3B-206ENST00000536398 P2RX4Q99571 388 aa11.14□□□□□ -0.63
UBE3B-206ENST00000536398 FAM103A1Q9BTL3 118 aaKnown RBP11.14□□□□□ -0.63
UBE3B-206ENST00000536398 SLC35D1Q9NTN3 355 aa11.14□□□□□ -0.63
UBE3B-206ENST00000536398 METTL1Q9UBP6 276 aaKnown RBP11.14□□□□□ -0.63
UBE3B-206ENST00000536398 ZNF580Q9UK33 172 aa11.14□□□□□ -0.63
UBE3B-206ENST00000536398 RBM7Q9Y580 266 aaKnown RBP11.14□□□□□ -0.63
UBE3B-206ENST00000536398 ETV7Q9Y603 341 aa11.14□□□□□ -0.63
UBE3B-206ENST00000536398 A3GALT2U3KPV4 340 aa11.14□□□□□ -0.63
UBE3B-206ENST00000536398 RBBP9O75884 186 aa11.13□□□□□ -0.63
UBE3B-206ENST00000536398 IGLV2-23P01705 113 aa11.13□□□□□ -0.63
UBE3B-206ENST00000536398 MYCNOSP40205 109 aa11.13□□□□□ -0.63
UBE3B-206ENST00000536398 ECSCRQ19T08 205 aa11.13□□□□□ -0.63
UBE3B-206ENST00000536398 C19orf54Q5BKX5 351 aa11.13□□□□□ -0.63
UBE3B-206ENST00000536398 ZNF660Q6AZW8 331 aaPredicted RBP11.13□□□□□ -0.63
UBE3B-206ENST00000536398 PDPNQ86YL7 162 aa11.13□□□□□ -0.63
UBE3B-206ENST00000536398 GVQW1Q8N7I0 195 aa11.13□□□□□ -0.63
UBE3B-206ENST00000536398 BVESQ8NE79 360 aa11.13□□□□□ -0.63
UBE3B-206ENST00000536398 FLYWCH2Q96CP2 140 aaKnown RBP11.13□□□□□ -0.63
UBE3B-206ENST00000536398 RNF5Q99942 180 aa11.13□□□□□ -0.63
UBE3B-206ENST00000536398 DCSTAMPQ9H295 470 aa11.13□□□□□ -0.63
UBE3B-206ENST00000536398 GNB4Q9HAV0 340 aa11.13□□□□□ -0.63
UBE3B-206ENST00000536398 VCX3AQ9NNX9 186 aa11.13□□□□□ -0.63
UBE3B-206ENST00000536398 SPATA2Q9UM82 520 aa11.13□□□□□ -0.63
UBE3B-206ENST00000536398 IGKV1D-13A0A0B4J2D9 117 aa11.12□□□□□ -0.63
UBE3B-206ENST00000536398 SRRM4A7MD48 611 aaKnown RBP11.12□□□□□ -0.63
UBE3B-206ENST00000536398 CCL24O00175 119 aa11.12□□□□□ -0.63
UBE3B-206ENST00000536398 SLC25A17O43808 307 aa11.12□□□□□ -0.63
UBE3B-206ENST00000536398 SOX15O60248 233 aa11.12□□□□□ -0.63
UBE3B-206ENST00000536398 SCGNO76038 276 aa11.12□□□□□ -0.63
UBE3B-206ENST00000536398 CA2P00918 260 aa11.12□□□□□ -0.63
UBE3B-206ENST00000536398 IGLV1-40P01703 118 aa11.12□□□□□ -0.63
UBE3B-206ENST00000536398 APOA2P02652 100 aa11.12□□□□□ -0.63
UBE3B-206ENST00000536398 SMIM18P0DKX4 95 aa11.12□□□□□ -0.63
UBE3B-206ENST00000536398 OR5H8P0DN80 308 aa11.12□□□□□ -0.63
UBE3B-206ENST00000536398 IGKV1-13P0DP09 117 aa11.12□□□□□ -0.63
UBE3B-206ENST00000536398 CDX1P47902 265 aaPredicted RBP11.12□□□□□ -0.63
UBE3B-206ENST00000536398 SCAND1P57086 179 aa11.12□□□□□ -0.63
UBE3B-206ENST00000536398 KRTAP10-11P60412 298 aa11.12□□□□□ -0.63
UBE3B-206ENST00000536398 PITPNAQ00169 270 aa11.12□□□□□ -0.63
UBE3B-206ENST00000536398 TIMM50Q3ZCQ8 353 aa11.12□□□□□ -0.63
UBE3B-206ENST00000536398 MINDY2Q8NBR6 621 aa11.12□□□□□ -0.63
UBE3B-206ENST00000536398 MYOZ3Q8TDC0 251 aa11.12□□□□□ -0.63
UBE3B-206ENST00000536398 ABHD5Q8WTS1 349 aa11.12□□□□□ -0.63
UBE3B-206ENST00000536398 DDB2Q92466 427 aa11.12□□□□□ -0.63
UBE3B-206ENST00000536398 OR5B12Q96R08 314 aa11.12□□□□□ -0.63
UBE3B-206ENST00000536398 FUNDC2Q9BWH2 189 aa11.12□□□□□ -0.63
UBE3B-206ENST00000536398 AUNIPQ9H7T9 357 aa11.12□□□□□ -0.63
UBE3B-206ENST00000536398 NECAP2Q9NVZ3 263 aa11.12□□□□□ -0.63
UBE3B-206ENST00000536398 AURKAIP1Q9NWT8 199 aaPredicted RBP11.12□□□□□ -0.63
UBE3B-206ENST00000536398 ANXA10Q9UJ72 324 aa11.12□□□□□ -0.63
UBE3B-206ENST00000536398 NUBP2Q9Y5Y2 271 aa11.12□□□□□ -0.63
UBE3B-206ENST00000536398 LINC00473A8K010 186 aa11.11□□□□□ -0.63
UBE3B-206ENST00000536398 ARPC1BO15143 372 aaKnown RBP11.11□□□□□ -0.63
UBE3B-206ENST00000536398 IGLV2-14P01704 120 aa11.11□□□□□ -0.63
UBE3B-206ENST00000536398 CRYGBP07316 175 aa11.11□□□□□ -0.63
UBE3B-206ENST00000536398 HOXD3P31249 432 aaPredicted RBP11.11□□□□□ -0.63
UBE3B-206ENST00000536398 DUTP33316 252 aaKnown RBP11.11□□□□□ -0.63
UBE3B-206ENST00000536398 RAB9AP51151 201 aa11.11□□□□□ -0.63
UBE3B-206ENST00000536398 RAB25P57735 213 aa11.11□□□□□ -0.63
UBE3B-206ENST00000536398 NCS1P62166 190 aa11.11□□□□□ -0.63
UBE3B-206ENST00000536398 SSBP2P81877 361 aaPredicted RBP11.11□□□□□ -0.63
UBE3B-206ENST00000536398 PJVKQ0ZLH3 352 aa11.11□□□□□ -0.63
UBE3B-206ENST00000536398 CNIH2Q6PI25 160 aa11.11□□□□□ -0.63
UBE3B-206ENST00000536398 PPP1R27Q86WC6 154 aa11.11□□□□□ -0.63
UBE3B-206ENST00000536398 ZNF491Q8N8L2 437 aa11.11□□□□□ -0.63
UBE3B-206ENST00000536398 RCC1LQ96I51 464 aaKnown RBP11.11□□□□□ -0.63
UBE3B-206ENST00000536398 TSNAXQ99598 290 aaKnown RBP11.11□□□□□ -0.63
UBE3B-206ENST00000536398 OR2W1Q9Y3N9 320 aa11.11□□□□□ -0.63
UBE3B-206ENST00000536398 TGP01266 2768 aa11.1□□□□□ -0.63
UBE3B-206ENST00000536398 A0A1W2PN81 502 aa11.1□□□□□ -0.63
UBE3B-206ENST00000536398 MEIS3P1A6NDR6 274 aa11.1□□□□□ -0.63
UBE3B-206ENST00000536398 HLA-DQB1P01920 261 aa11.1□□□□□ -0.63
UBE3B-206ENST00000536398 SLC6A1P30531 599 aa11.1□□□□□ -0.63
UBE3B-206ENST00000536398 CHRNA7P36544 502 aa11.1□□□□□ -0.63
UBE3B-206ENST00000536398 CRIP2P52943 208 aaPredicted RBP11.1□□□□□ -0.63
UBE3B-206ENST00000536398 VBP1P61758 197 aa11.1□□□□□ -0.63
UBE3B-206ENST00000536398 RPL30P62888 115 aaKnown RBP11.1□□□□□ -0.63
UBE3B-206ENST00000536398 MRGPRG-AS1Q2M3A8 158 aa11.1□□□□□ -0.63
UBE3B-206ENST00000536398 TMEM177Q53S58 311 aa11.1□□□□□ -0.63
UBE3B-206ENST00000536398 TMEM65Q6PI78 240 aa11.1□□□□□ -0.63
UBE3B-206ENST00000536398 ZNF562Q6V9R5 426 aa11.1□□□□□ -0.63
UBE3B-206ENST00000536398 HOGA1Q86XE5 327 aa11.1□□□□□ -0.63
UBE3B-206ENST00000536398 LFNGQ8NES3 379 aa11.1□□□□□ -0.63
UBE3B-206ENST00000536398 OR13F1Q8NGS4 319 aa11.1□□□□□ -0.63
UBE3B-206ENST00000536398 NAA50Q9GZZ1 169 aaKnown RBP11.1□□□□□ -0.63
UBE3B-206ENST00000536398 DIABLOQ9NR28 239 aa11.1□□□□□ -0.63
UBE3B-206ENST00000536398 A0A0A6YYH2 397 aa11.09□□□□□ -0.63
UBE3B-206ENST00000536398 A6NJ64 397 aa11.09□□□□□ -0.63
UBE3B-206ENST00000536398 SPDEFO95238 335 aa11.09□□□□□ -0.63
UBE3B-206ENST00000536398 CTXN2P0C2S0 81 aa11.09□□□□□ -0.63
UBE3B-206ENST00000536398 LUMP51884 338 aaPredicted RBP11.09□□□□□ -0.63
UBE3B-206ENST00000536398 GNB1P62873 340 aa11.09□□□□□ -0.63
UBE3B-206ENST00000536398 FXYD3Q14802 87 aa11.09□□□□□ -0.63
UBE3B-206ENST00000536398 UNQ5815/PRO19632Q6UWF5 114 aa11.09□□□□□ -0.63
UBE3B-206ENST00000536398 ZNF645Q8N7E2 425 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms