RNA–Protein interactions for RNA: ENST00000535789.1

ATL3-202, Transcript of atlastin GTPase 3, humanhuman

TSL 4

Gene ATL3, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-202ENST00000535789 BORCS5Q969J3 196 aa12.9□□□□□ -0.34
ATL3-202ENST00000535789 ABHD14BQ96IU4 210 aa12.9□□□□□ -0.34
ATL3-202ENST00000535789 CMSS1Q9BQ75 279 aaKnown RBP12.9□□□□□ -0.34
ATL3-202ENST00000535789 SLC23A1Q9UHI7 598 aa12.9□□□□□ -0.34
ATL3-202ENST00000535789 MEIS3P1A6NDR6 274 aa12.89□□□□□ -0.35
ATL3-202ENST00000535789 FCGR3AP08637 254 aa12.89□□□□□ -0.35
ATL3-202ENST00000535789 CD3GP09693 182 aa12.89□□□□□ -0.35
ATL3-202ENST00000535789 IL7P13232 177 aa12.89□□□□□ -0.35
ATL3-202ENST00000535789 IFITM3Q01628 133 aa12.89□□□□□ -0.35
ATL3-202ENST00000535789 CFHR3Q02985 330 aa12.89□□□□□ -0.35
ATL3-202ENST00000535789 ARFRP1Q13795 201 aa12.89□□□□□ -0.35
ATL3-202ENST00000535789 KPRPQ5T749 579 aaPredicted RBP12.89□□□□□ -0.35
ATL3-202ENST00000535789 GLDNQ6ZMI3 551 aaPredicted RBP12.89□□□□□ -0.35
ATL3-202ENST00000535789 OR4X2Q8NGF9 303 aa12.89□□□□□ -0.35
ATL3-202ENST00000535789 FCAMRQ8WWV6 532 aa12.89□□□□□ -0.35
ATL3-202ENST00000535789 MAFIPQ8WZ33 124 aa12.89□□□□□ -0.35
ATL3-202ENST00000535789 C5orf30Q96GV9 206 aa12.89□□□□□ -0.35
ATL3-202ENST00000535789 THAP7Q9BT49 309 aaPredicted RBP12.89□□□□□ -0.35
ATL3-202ENST00000535789 C11orf54Q9H0W9 315 aaPredicted RBP12.89□□□□□ -0.35
ATL3-202ENST00000535789 RIMS4Q9H426 269 aaPredicted RBP12.89□□□□□ -0.35
ATL3-202ENST00000535789 MTFP1Q9UDX5 166 aa12.89□□□□□ -0.35
ATL3-202ENST00000535789 TSSC4Q9Y5U2 329 aaPredicted RBP12.89□□□□□ -0.35
ATL3-202ENST00000535789 IGKV1D-8A0A087WSZ0 117 aa12.88□□□□□ -0.35
ATL3-202ENST00000535789 TCRBV4S1A1TA0A5B7 111 aa12.88□□□□□ -0.35
ATL3-202ENST00000535789 UPK1BO75841 260 aa12.88□□□□□ -0.35
ATL3-202ENST00000535789 RGS11O94810 467 aa12.88□□□□□ -0.35
ATL3-202ENST00000535789 CT45A6P0DMU7 189 aa12.88□□□□□ -0.35
ATL3-202ENST00000535789 CT45A5P0DMU8 189 aa12.88□□□□□ -0.35
ATL3-202ENST00000535789 CT45A7P0DMV0 189 aa12.88□□□□□ -0.35
ATL3-202ENST00000535789 LINC00205P59089 165 aa12.88□□□□□ -0.35
ATL3-202ENST00000535789 OXLD1Q5BKU9 147 aa12.88□□□□□ -0.35
ATL3-202ENST00000535789 FAM71F2Q6NXP2 309 aa12.88□□□□□ -0.35
ATL3-202ENST00000535789 LCNL1Q6ZST4 164 aa12.88□□□□□ -0.35
ATL3-202ENST00000535789 OR4F17Q8NGA8 305 aa12.88□□□□□ -0.35
ATL3-202ENST00000535789 OR4F4Q96R69 305 aa12.88□□□□□ -0.35
ATL3-202ENST00000535789 KLK11Q9UBX7 282 aa12.88□□□□□ -0.35
ATL3-202ENST00000535789 ZNF230Q9UIE0 474 aaPredicted RBP12.88□□□□□ -0.35
ATL3-202ENST00000535789 ZNF107Q9UII5 783 aaPredicted RBP12.88□□□□□ -0.35
ATL3-202ENST00000535789 ITGB1BP1O14713 200 aa12.87□□□□□ -0.35
ATL3-202ENST00000535789 DTYMKP23919 212 aa12.87□□□□□ -0.35
ATL3-202ENST00000535789 CBX5P45973 191 aa12.87□□□□□ -0.35
ATL3-202ENST00000535789 ACTBP60709 375 aa12.87□□□□□ -0.35
ATL3-202ENST00000535789 SSBP1Q04837 148 aaKnown RBP12.87□□□□□ -0.35
ATL3-202ENST00000535789 IGSF11Q5DX21 431 aa12.87□□□□□ -0.35
ATL3-202ENST00000535789 GVQW1Q8N7I0 195 aa12.87□□□□□ -0.35
ATL3-202ENST00000535789 CHPT1Q8WUD6 406 aa12.87□□□□□ -0.35
ATL3-202ENST00000535789 CABLES2Q9BTV7 478 aa12.87□□□□□ -0.35
ATL3-202ENST00000535789 TRDCB7Z8K6 153 aa12.86□□□□□ -0.35
ATL3-202ENST00000535789 H0YJW9 148 aa12.86□□□□□ -0.35
ATL3-202ENST00000535789 NDUFA3O95167 84 aa12.86□□□□□ -0.35
ATL3-202ENST00000535789 NAT1P18440 290 aa12.86□□□□□ -0.35
ATL3-202ENST00000535789 RCVRNP35243 200 aa12.86□□□□□ -0.35
ATL3-202ENST00000535789 CEACAM6P40199 344 aa12.86□□□□□ -0.35
ATL3-202ENST00000535789 RPL23AP62750 156 aaKnown RBP12.86□□□□□ -0.35
ATL3-202ENST00000535789 NDPQ00604 133 aa12.86□□□□□ -0.35
ATL3-202ENST00000535789 MMDQ15546 238 aa12.86□□□□□ -0.35
ATL3-202ENST00000535789 KHDC1LQ5JSQ8 128 aa12.86□□□□□ -0.35
ATL3-202ENST00000535789 TRIQKQ629K1 86 aa12.86□□□□□ -0.35
ATL3-202ENST00000535789 HOGA1Q86XE5 327 aa12.86□□□□□ -0.35
ATL3-202ENST00000535789 LYSMD2Q8IV50 215 aa12.86□□□□□ -0.35
ATL3-202ENST00000535789 OR8H1Q8NGG4 311 aa12.86□□□□□ -0.35
ATL3-202ENST00000535789 SNAPC3Q92966 411 aa12.86□□□□□ -0.35
ATL3-202ENST00000535789 TOLLIPQ9H0E2 274 aa12.86□□□□□ -0.35
ATL3-202ENST00000535789 PALMDQ9NP74 551 aa12.86□□□□□ -0.35
ATL3-202ENST00000535789 PIPOXQ9P0Z9 390 aa12.86□□□□□ -0.35
ATL3-202ENST00000535789 ANKRD20A5PA0PJZ0 165 aa12.85□□□□□ -0.35
ATL3-202ENST00000535789 AP4M1O00189 453 aa12.85□□□□□ -0.35
ATL3-202ENST00000535789 RAB29O14966 203 aa12.85□□□□□ -0.35
ATL3-202ENST00000535789 FABP7O15540 132 aa12.85□□□□□ -0.35
ATL3-202ENST00000535789 RBBP9O75884 186 aa12.85□□□□□ -0.35
ATL3-202ENST00000535789 PRB2P02812 416 aaPredicted RBP12.85□□□□□ -0.35
ATL3-202ENST00000535789 GSTT2P0CG29 244 aa12.85□□□□□ -0.35
ATL3-202ENST00000535789 GSTT2BP0CG30 244 aa12.85□□□□□ -0.35
ATL3-202ENST00000535789 ZBTB25P24278 435 aa12.85□□□□□ -0.35
ATL3-202ENST00000535789 MRPS15P82914 257 aaKnown RBP12.85□□□□□ -0.35
ATL3-202ENST00000535789 DCTN2Q13561 401 aaKnown RBP12.85□□□□□ -0.35
ATL3-202ENST00000535789 KLF9Q13886 244 aaPredicted RBP12.85□□□□□ -0.35
ATL3-202ENST00000535789 Q6ZS49 121 aa12.85□□□□□ -0.35
ATL3-202ENST00000535789 FOXRED2Q8IWF2 684 aa12.85□□□□□ -0.35
ATL3-202ENST00000535789 IFT46Q9NQC8 304 aa12.85□□□□□ -0.35
ATL3-202ENST00000535789 RDH8Q9NYR8 311 aa12.85□□□□□ -0.35
ATL3-202ENST00000535789 RNF150Q9ULK6 438 aa12.85□□□□□ -0.35
ATL3-202ENST00000535789 MGAT4AQ9UM21 535 aa12.85□□□□□ -0.35
ATL3-202ENST00000535789 FBXO7Q9Y3I1 522 aa12.85□□□□□ -0.35
ATL3-202ENST00000535789 TNCP24821 2201 aa12.85□□□□□ -0.35
ATL3-202ENST00000535789 IGHV7-81A0A0B4J1V7 117 aa12.84□□□□□ -0.35
ATL3-202ENST00000535789 NBR2O15453 112 aa12.84□□□□□ -0.35
ATL3-202ENST00000535789 RPLP1P05386 114 aaKnown RBP12.84□□□□□ -0.35
ATL3-202ENST00000535789 FCER2P06734 321 aa12.84□□□□□ -0.35
ATL3-202ENST00000535789 PF4V1P10720 104 aa12.84□□□□□ -0.35
ATL3-202ENST00000535789 SRSF7Q16629 238 aaKnown RBP eCLIP12.84□□□□□ -0.35
ATL3-202ENST00000535789 C8orf86Q6ZUL3 223 aa12.84□□□□□ -0.35
ATL3-202ENST00000535789 ZNF383Q8NA42 475 aa12.84□□□□□ -0.35
ATL3-202ENST00000535789 DRAXINQ8NBI3 349 aaPredicted RBP12.84□□□□□ -0.35
ATL3-202ENST00000535789 WFDC9Q8NEX5 89 aa12.84□□□□□ -0.35
ATL3-202ENST00000535789 NPBQ8NG41 125 aa12.84□□□□□ -0.35
ATL3-202ENST00000535789 OR5AN1Q8NGI8 311 aa12.84□□□□□ -0.35
ATL3-202ENST00000535789 OR4A4PQ8NGN8 299 aa12.84□□□□□ -0.35
ATL3-202ENST00000535789 RASL11BQ9BPW5 248 aa12.84□□□□□ -0.35
ATL3-202ENST00000535789 TBC1D24Q9ULP9 559 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms