RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 TRAV10A0A0B4J240 114 aa6.01□□□□□ -1.45
CLIP1-206ENST00000535290 FAM90A7PA6NKC0 464 aa6.01□□□□□ -1.45
CLIP1-206ENST00000535290 FAM223BA6NKX1 122 aa6.01□□□□□ -1.45
CLIP1-206ENST00000535290 A8MWP6 167 aa6.01□□□□□ -1.45
CLIP1-206ENST00000535290 MCRIP1C9JLW8 97 aa6.01□□□□□ -1.45
CLIP1-206ENST00000535290 F8W735 103 aaPredicted RBP6.01□□□□□ -1.45
CLIP1-206ENST00000535290 RAB29O14966 203 aa6.01□□□□□ -1.45
CLIP1-206ENST00000535290 CCDC22O60826 627 aa6.01□□□□□ -1.45
CLIP1-206ENST00000535290 PROP1O75360 226 aa6.01□□□□□ -1.45
CLIP1-206ENST00000535290 TUSC2O75896 110 aa6.01□□□□□ -1.45
CLIP1-206ENST00000535290 IGLV2-23P01705 113 aa6.01□□□□□ -1.45
CLIP1-206ENST00000535290 SCTP09683 121 aa6.01□□□□□ -1.45
CLIP1-206ENST00000535290 SERPINA2P20848 420 aa6.01□□□□□ -1.45
CLIP1-206ENST00000535290 HTD2P86397 168 aa6.01□□□□□ -1.45
CLIP1-206ENST00000535290 PTGES3Q15185 160 aaKnown RBP6.01□□□□□ -1.45
CLIP1-206ENST00000535290 MED22Q15528 200 aa6.01□□□□□ -1.45
CLIP1-206ENST00000535290 MRGPRG-AS1Q2M3A8 158 aa6.01□□□□□ -1.45
CLIP1-206ENST00000535290 C15orf32Q32M92 178 aa6.01□□□□□ -1.45
CLIP1-206ENST00000535290 SPATS1Q496A3 300 aa6.01□□□□□ -1.45
CLIP1-206ENST00000535290 LINC00596Q86U02 117 aa6.01□□□□□ -1.45
CLIP1-206ENST00000535290 FAM223AQ8IWN6 122 aa6.01□□□□□ -1.45
CLIP1-206ENST00000535290 PARP16Q8N5Y8 322 aa6.01□□□□□ -1.45
CLIP1-206ENST00000535290 ZNF383Q8NA42 475 aa6.01□□□□□ -1.45
CLIP1-206ENST00000535290 TMEM163Q8TC26 289 aa6.01□□□□□ -1.45
CLIP1-206ENST00000535290 CMTM5Q96DZ9 223 aa6.01□□□□□ -1.45
CLIP1-206ENST00000535290 GALNT14Q96FL9 552 aa6.01□□□□□ -1.45
CLIP1-206ENST00000535290 METTL9Q9H1A3 318 aa6.01□□□□□ -1.45
CLIP1-206ENST00000535290 IL36GQ9NZH8 169 aa6.01□□□□□ -1.45
CLIP1-206ENST00000535290 KCNIP1Q9NZI2 227 aa6.01□□□□□ -1.45
CLIP1-206ENST00000535290 AGRNO00468 2067 aa6.01□□□□□ -1.45
CLIP1-206ENST00000535290 OR2J3O76001 311 aa6□□□□□ -1.45
CLIP1-206ENST00000535290 CST1P01037 141 aa6□□□□□ -1.45
CLIP1-206ENST00000535290 IGHV3-23P01764 117 aa6□□□□□ -1.45
CLIP1-206ENST00000535290 AMBPP02760 352 aa6□□□□□ -1.45
CLIP1-206ENST00000535290 RBMY1CP0DJD4 496 aa6□□□□□ -1.45
CLIP1-206ENST00000535290 C8orf88P0DMB2 117 aa6□□□□□ -1.45
CLIP1-206ENST00000535290 T-ENOLP0DO92 83 aa6□□□□□ -1.45
CLIP1-206ENST00000535290 NAT1P18440 290 aa6□□□□□ -1.45
CLIP1-206ENST00000535290 RAB3AP20336 220 aa6□□□□□ -1.45
CLIP1-206ENST00000535290 CCR9P51686 369 aa6□□□□□ -1.45
CLIP1-206ENST00000535290 ZNF124Q15973 351 aa6□□□□□ -1.45
CLIP1-206ENST00000535290 FAM98BQ52LJ0 330 aaKnown RBP6□□□□□ -1.45
CLIP1-206ENST00000535290 ZNF585BQ52M93 769 aa6□□□□□ -1.45
CLIP1-206ENST00000535290 SLC25A30Q5SVS4 291 aa6□□□□□ -1.45
CLIP1-206ENST00000535290 RAB12Q6IQ22 244 aa6□□□□□ -1.45
CLIP1-206ENST00000535290 CDPF1Q6NVV7 123 aa6□□□□□ -1.45
CLIP1-206ENST00000535290 ZNF529Q6P280 563 aa6□□□□□ -1.45
CLIP1-206ENST00000535290 UNQ9165/PRO28630Q6UXU0 137 aa6□□□□□ -1.45
CLIP1-206ENST00000535290 APRG1Q8IVJ8 170 aa6□□□□□ -1.45
CLIP1-206ENST00000535290 Q8NAQ8 132 aa6□□□□□ -1.45
CLIP1-206ENST00000535290 NECAP1Q8NC96 275 aa6□□□□□ -1.45
CLIP1-206ENST00000535290 CD300LFQ8TDQ1 290 aa6□□□□□ -1.45
CLIP1-206ENST00000535290 PELI1Q96FA3 418 aa6□□□□□ -1.45
CLIP1-206ENST00000535290 PHB2Q99623 299 aa6□□□□□ -1.45
CLIP1-206ENST00000535290 SPAG8Q99932 426 aaPredicted RBP6□□□□□ -1.45
CLIP1-206ENST00000535290 SULT4A1Q9BR01 284 aa6□□□□□ -1.45
CLIP1-206ENST00000535290 AGMATQ9BSE5 352 aa6□□□□□ -1.45
CLIP1-206ENST00000535290 CHRDL1Q9BU40 450 aa6□□□□□ -1.45
CLIP1-206ENST00000535290 C5orf66Q9H5L9 145 aa6□□□□□ -1.45
CLIP1-206ENST00000535290 WARS2Q9UGM6 360 aaKnown RBP6□□□□□ -1.45
CLIP1-206ENST00000535290 EXOSC1Q9Y3B2 195 aaKnown RBP6□□□□□ -1.45
CLIP1-206ENST00000535290 FAT1Q14517 4588 aa5.99□□□□□ -1.45
CLIP1-206ENST00000535290 UBE2QL1A1L167 161 aa5.99□□□□□ -1.45
CLIP1-206ENST00000535290 SC5DO75845 299 aa5.99□□□□□ -1.45
CLIP1-206ENST00000535290 IFNA10P01566 189 aa5.99□□□□□ -1.45
CLIP1-206ENST00000535290 HTR1AP08908 422 aa5.99□□□□□ -1.45
CLIP1-206ENST00000535290 ANXA8P13928 327 aa5.99□□□□□ -1.45
CLIP1-206ENST00000535290 ADMP35318 185 aa5.99□□□□□ -1.45
CLIP1-206ENST00000535290 ATP6V1E1P36543 226 aa5.99□□□□□ -1.45
CLIP1-206ENST00000535290 MED21Q13503 144 aa5.99□□□□□ -1.45
CLIP1-206ENST00000535290 FAM106AQ4KMX7 169 aa5.99□□□□□ -1.45
CLIP1-206ENST00000535290 SLC22A6Q4U2R8 563 aa5.99□□□□□ -1.45
CLIP1-206ENST00000535290 ZNF554Q86TJ5 538 aa5.99□□□□□ -1.45
CLIP1-206ENST00000535290 GID4Q8IVV7 300 aa5.99□□□□□ -1.45
CLIP1-206ENST00000535290 MRPL30Q8TCC3 161 aaKnown RBP5.99□□□□□ -1.45
CLIP1-206ENST00000535290 IL1F10Q8WWZ1 152 aa5.99□□□□□ -1.45
CLIP1-206ENST00000535290 GALMQ96C23 342 aa5.99□□□□□ -1.45
CLIP1-206ENST00000535290 CPNE2Q96FN4 548 aaPredicted RBP5.99□□□□□ -1.45
CLIP1-206ENST00000535290 C18orf15Q96N68 181 aa5.99□□□□□ -1.45
CLIP1-206ENST00000535290 ELAC2Q9BQ52 826 aaKnown RBP5.99□□□□□ -1.45
CLIP1-206ENST00000535290 SPACA1Q9HBV2 294 aa5.99□□□□□ -1.45
CLIP1-206ENST00000535290 TAS2R4Q9NYW5 299 aa5.99□□□□□ -1.45
CLIP1-206ENST00000535290 RPL36Q9Y3U8 105 aaKnown RBP5.99□□□□□ -1.45
CLIP1-206ENST00000535290 PEX16Q9Y5Y5 336 aa5.99□□□□□ -1.45
CLIP1-206ENST00000535290 S4R3C0 116 aa5.99□□□□□ -1.45
CLIP1-206ENST00000535290 IGHV4-28A0A0C4DH34 117 aa5.98□□□□□ -1.45
CLIP1-206ENST00000535290 SRRM4A7MD48 611 aaKnown RBP5.98□□□□□ -1.45
CLIP1-206ENST00000535290 TSPAN4O14817 238 aa5.98□□□□□ -1.45
CLIP1-206ENST00000535290 SLC16A6O15403 523 aa5.98□□□□□ -1.45
CLIP1-206ENST00000535290 MPPED1O15442 326 aa5.98□□□□□ -1.45
CLIP1-206ENST00000535290 CA11O75493 328 aa5.98□□□□□ -1.45
CLIP1-206ENST00000535290 CD74P04233 296 aa5.98□□□□□ -1.45
CLIP1-206ENST00000535290 RAP2AP10114 183 aa5.98□□□□□ -1.45
CLIP1-206ENST00000535290 GTF2F2P13984 249 aa5.98□□□□□ -1.45
CLIP1-206ENST00000535290 PRDX6P30041 224 aa5.98□□□□□ -1.45
CLIP1-206ENST00000535290 ARL3P36405 182 aa5.98□□□□□ -1.45
CLIP1-206ENST00000535290 MAP2K4P45985 399 aa5.98□□□□□ -1.45
CLIP1-206ENST00000535290 MS4A2Q01362 244 aa5.98□□□□□ -1.45
CLIP1-206ENST00000535290 OR4A47Q6IF82 309 aa5.98□□□□□ -1.45
CLIP1-206ENST00000535290 CLEC19AQ6UXS0 136 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms