RNA–Protein interactions for RNA: ENST00000535181.5

CHFR-209, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-209ENST00000535181 CCDC190Q86UF4 302 aa16.35■□□□□ 0.21
CHFR-209ENST00000535181 RNF5Q99942 180 aa16.35■□□□□ 0.21
CHFR-209ENST00000535181 RNF114Q9Y508 228 aa16.35■□□□□ 0.21
CHFR-209ENST00000535181 DUTP33316 252 aaKnown RBP16.34■□□□□ 0.21
CHFR-209ENST00000535181 RNASE12Q5GAN4 147 aaKnown RBP16.34■□□□□ 0.21
CHFR-209ENST00000535181 Q8N9W7 124 aa16.34■□□□□ 0.21
CHFR-209ENST00000535181 TMEM229BQ8NBD8 167 aa16.34■□□□□ 0.21
CHFR-209ENST00000535181 DRAXINQ8NBI3 349 aaPredicted RBP16.34■□□□□ 0.21
CHFR-209ENST00000535181 ZBTB34Q8NCN2 500 aa16.34■□□□□ 0.21
CHFR-209ENST00000535181 DDB2Q92466 427 aa16.34■□□□□ 0.21
CHFR-209ENST00000535181 MOB3AQ96BX8 217 aa16.34■□□□□ 0.21
CHFR-209ENST00000535181 LIN7CQ9NUP9 197 aaKnown RBP16.34■□□□□ 0.21
CHFR-209ENST00000535181 V9GYH0 126 aa16.34■□□□□ 0.21
CHFR-209ENST00000535181 CD74P04233 296 aa16.33■□□□□ 0.2
CHFR-209ENST00000535181 ETV6P41212 452 aa16.33■□□□□ 0.2
CHFR-209ENST00000535181 TAS2R19P59542 299 aa16.33■□□□□ 0.2
CHFR-209ENST00000535181 HERV-K104P61576 105 aa16.33■□□□□ 0.2
CHFR-209ENST00000535181 EIF4EBP1Q13541 118 aaPredicted RBP16.33■□□□□ 0.2
CHFR-209ENST00000535181 ABCA11PQ4W5N1 156 aa16.33■□□□□ 0.2
CHFR-209ENST00000535181 FAM71E2Q8N5Q1 922 aa16.33■□□□□ 0.2
CHFR-209ENST00000535181 NPBQ8NG41 125 aa16.33■□□□□ 0.2
CHFR-209ENST00000535181 OR6Q1Q8NGQ2 317 aa16.33■□□□□ 0.2
CHFR-209ENST00000535181 OR6F1Q8NGZ6 308 aa16.33■□□□□ 0.2
CHFR-209ENST00000535181 BORCS5Q969J3 196 aa16.33■□□□□ 0.2
CHFR-209ENST00000535181 HSD17B10Q99714 261 aaKnown RBP16.33■□□□□ 0.2
CHFR-209ENST00000535181 ZNF2Q9BSG1 426 aaPredicted RBP16.33■□□□□ 0.2
CHFR-209ENST00000535181 ZNF747Q9BV97 191 aa16.33■□□□□ 0.2
CHFR-209ENST00000535181 TAS2R8Q9NYW2 309 aa16.33■□□□□ 0.2
CHFR-209ENST00000535181 STAB1Q9NY15 2570 aa16.33■□□□□ 0.2
CHFR-209ENST00000535181 NCBP2LA6PVI3 153 aaKnown RBP16.32■□□□□ 0.2
CHFR-209ENST00000535181 H7C2Y5 167 aa16.32■□□□□ 0.2
CHFR-209ENST00000535181 J3QRK9 145 aa16.32■□□□□ 0.2
CHFR-209ENST00000535181 NDUFA3O95167 84 aa16.32■□□□□ 0.2
CHFR-209ENST00000535181 RRASP10301 218 aa16.32■□□□□ 0.2
CHFR-209ENST00000535181 F2RL1P55085 397 aa16.32■□□□□ 0.2
CHFR-209ENST00000535181 LINC00205P59089 165 aa16.32■□□□□ 0.2
CHFR-209ENST00000535181 MMDQ15546 238 aa16.32■□□□□ 0.2
CHFR-209ENST00000535181 Q6ZS46 218 aa16.32■□□□□ 0.2
CHFR-209ENST00000535181 ARRDC1Q8N5I2 433 aa16.32■□□□□ 0.2
CHFR-209ENST00000535181 SECTM1Q8WVN6 248 aa16.32■□□□□ 0.2
CHFR-209ENST00000535181 WFDC12Q8WWY7 111 aa16.32■□□□□ 0.2
CHFR-209ENST00000535181 BATF3Q9NR55 127 aa16.32■□□□□ 0.2
CHFR-209ENST00000535181 SLC35D1Q9NTN3 355 aa16.32■□□□□ 0.2
CHFR-209ENST00000535181 SERTAD4Q9NUC0 356 aa16.32■□□□□ 0.2
CHFR-209ENST00000535181 TENM1Q9UKZ4 2725 aa16.32■□□□□ 0.2
CHFR-209ENST00000535181 NBR2O15453 112 aa16.31■□□□□ 0.2
CHFR-209ENST00000535181 CD3DP04234 171 aa16.31■□□□□ 0.2
CHFR-209ENST00000535181 CSF1P09603 554 aa16.31■□□□□ 0.2
CHFR-209ENST00000535181 FXYD4P59646 89 aa16.31■□□□□ 0.2
CHFR-209ENST00000535181 TSPAN5P62079 268 aa16.31■□□□□ 0.2
CHFR-209ENST00000535181 RNASE10Q5GAN6 216 aaKnown RBP16.31■□□□□ 0.2
CHFR-209ENST00000535181 ZNF66Q6ZN08 573 aa16.31■□□□□ 0.2
CHFR-209ENST00000535181 C3orf56Q8N813 242 aa16.31■□□□□ 0.2
CHFR-209ENST00000535181 RITA1Q96K30 269 aa16.31■□□□□ 0.2
CHFR-209ENST00000535181 SLC5A7Q9GZV3 580 aa16.31■□□□□ 0.2
CHFR-209ENST00000535181 CCL28Q9NRJ3 127 aa16.31■□□□□ 0.2
CHFR-209ENST00000535181 SIGLEC9Q9Y336 463 aa16.31■□□□□ 0.2
CHFR-209ENST00000535181 LINC00473A8K010 186 aa16.3■□□□□ 0.2
CHFR-209ENST00000535181 SPDEFO95238 335 aa16.3■□□□□ 0.2
CHFR-209ENST00000535181 IGKV1-16P04430 117 aa16.3■□□□□ 0.2
CHFR-209ENST00000535181 CBX3Q13185 183 aa16.3■□□□□ 0.2
CHFR-209ENST00000535181 RTL8BQ17RB0 113 aa16.3■□□□□ 0.2
CHFR-209ENST00000535181 SPANXN2Q5MJ10 180 aa16.3■□□□□ 0.2
CHFR-209ENST00000535181 TMEM17Q86X19 198 aa16.3■□□□□ 0.2
CHFR-209ENST00000535181 FLYWCH2Q96CP2 140 aaKnown RBP16.3■□□□□ 0.2
CHFR-209ENST00000535181 RASL11BQ9BPW5 248 aa16.3■□□□□ 0.2
CHFR-209ENST00000535181 WNT10AQ9GZT5 417 aa16.3■□□□□ 0.2
CHFR-209ENST00000535181 FXYD6Q9H0Q3 95 aa16.3■□□□□ 0.2
CHFR-209ENST00000535181 M0QYG6 137 aa16.29■□□□□ 0.2
CHFR-209ENST00000535181 IGHG2P01859 326 aa16.29■□□□□ 0.2
CHFR-209ENST00000535181 VDAC2P45880 294 aaPredicted RBP16.29■□□□□ 0.2
CHFR-209ENST00000535181 ZNF79Q15937 498 aa16.29■□□□□ 0.2
CHFR-209ENST00000535181 TMEM177Q53S58 311 aa16.29■□□□□ 0.2
CHFR-209ENST00000535181 STEAP1BQ6NZ63 245 aa16.29■□□□□ 0.2
CHFR-209ENST00000535181 KCTD9Q7L273 389 aa16.29■□□□□ 0.2
CHFR-209ENST00000535181 BVESQ8NE79 360 aa16.29■□□□□ 0.2
CHFR-209ENST00000535181 RBMXL1Q96E39 390 aaKnown RBP16.29■□□□□ 0.2
CHFR-209ENST00000535181 TSNAXQ99598 290 aaKnown RBP16.29■□□□□ 0.2
CHFR-209ENST00000535181 TINAGL1Q9GZM7 467 aaPredicted RBP16.29■□□□□ 0.2
CHFR-209ENST00000535181 KIAA1456Q9P272 454 aa16.29■□□□□ 0.2
CHFR-209ENST00000535181 PRELID3BQ9Y3B1 194 aa16.29■□□□□ 0.2
CHFR-209ENST00000535181 SH2D7A6NKC9 451 aaPredicted RBP16.28■□□□□ 0.2
CHFR-209ENST00000535181 RAB3DO95716 219 aa16.28■□□□□ 0.2
CHFR-209ENST00000535181 IFNA6P05013 189 aa16.28■□□□□ 0.2
CHFR-209ENST00000535181 CNTFRP26992 372 aa16.28■□□□□ 0.2
CHFR-209ENST00000535181 GNRHRP30968 328 aa16.28■□□□□ 0.2
CHFR-209ENST00000535181 LGALS7P47929 136 aa16.28■□□□□ 0.2
CHFR-209ENST00000535181 UCP3P55916 312 aa16.28■□□□□ 0.2
CHFR-209ENST00000535181 MEF2DQ14814 521 aa16.28■□□□□ 0.2
CHFR-209ENST00000535181 C5orf64Q2M2E5 130 aa16.28■□□□□ 0.2
CHFR-209ENST00000535181 ARSJQ5FYB0 599 aaPredicted RBP16.28■□□□□ 0.2
CHFR-209ENST00000535181 LPCAT3Q6P1A2 487 aa16.28■□□□□ 0.2
CHFR-209ENST00000535181 ZNF818PQ6ZRF7 136 aa16.28■□□□□ 0.2
CHFR-209ENST00000535181 LHFPL1Q86WI0 220 aa16.28■□□□□ 0.2
CHFR-209ENST00000535181 ANKRD20A5PA0PJZ0 165 aa16.27■□□□□ 0.2
CHFR-209ENST00000535181 RRHO14718 337 aa16.27■□□□□ 0.2
CHFR-209ENST00000535181 KCNAB3O43448 404 aa16.27■□□□□ 0.2
CHFR-209ENST00000535181 HLA-DRB1P01911 266 aa16.27■□□□□ 0.2
CHFR-209ENST00000535181 RPL30P62888 115 aaKnown RBP16.27■□□□□ 0.2
CHFR-209ENST00000535181 PYDC2Q56P42 97 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms