RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 GNB1P62873 340 aa8.13□□□□□ -1.11
CAPN1-225ENST00000533704 DGCR2P98153 550 aa8.13□□□□□ -1.11
CAPN1-225ENST00000533704 MXD1Q05195 221 aa8.13□□□□□ -1.11
CAPN1-225ENST00000533704 UNQ5815/PRO19632Q6UWF5 114 aa8.13□□□□□ -1.11
CAPN1-225ENST00000533704 ZNF491Q8N8L2 437 aa8.13□□□□□ -1.11
CAPN1-225ENST00000533704 OR1N2Q8NGR9 330 aa8.13□□□□□ -1.11
CAPN1-225ENST00000533704 GRPEL2Q8TAA5 225 aa8.13□□□□□ -1.11
CAPN1-225ENST00000533704 FLYWCH2Q96CP2 140 aaKnown RBP8.13□□□□□ -1.11
CAPN1-225ENST00000533704 UBE2E2Q96LR5 201 aa8.13□□□□□ -1.11
CAPN1-225ENST00000533704 MS4A10Q96PG2 267 aa8.13□□□□□ -1.11
CAPN1-225ENST00000533704 OR51E2Q9H255 320 aa8.13□□□□□ -1.11
CAPN1-225ENST00000533704 TPSG1Q9NRR2 321 aa8.13□□□□□ -1.11
CAPN1-225ENST00000533704 DAPK2Q9UIK4 370 aa8.13□□□□□ -1.11
CAPN1-225ENST00000533704 ELF5Q9UKW6 265 aaPredicted RBP8.13□□□□□ -1.11
CAPN1-225ENST00000533704 TRBV6-7A0A0A0MS04 114 aa8.12□□□□□ -1.11
CAPN1-225ENST00000533704 LOC100506127A0A0U1RQW1 187 aa8.12□□□□□ -1.11
CAPN1-225ENST00000533704 SOX15O60248 233 aa8.12□□□□□ -1.11
CAPN1-225ENST00000533704 CNIH1O95406 144 aa8.12□□□□□ -1.11
CAPN1-225ENST00000533704 IGLV1-40P01703 118 aa8.12□□□□□ -1.11
CAPN1-225ENST00000533704 IGHV3-11P01762 117 aa8.12□□□□□ -1.11
CAPN1-225ENST00000533704 FGF9P31371 208 aaPredicted RBP8.12□□□□□ -1.11
CAPN1-225ENST00000533704 ECI1P42126 302 aa8.12□□□□□ -1.11
CAPN1-225ENST00000533704 ZNF616Q08AN1 781 aa8.12□□□□□ -1.11
CAPN1-225ENST00000533704 TMEM267Q0VDI3 215 aaPredicted RBP8.12□□□□□ -1.11
CAPN1-225ENST00000533704 CBX3Q13185 183 aa8.12□□□□□ -1.11
CAPN1-225ENST00000533704 KIAA0141Q14154 515 aaPredicted RBP8.12□□□□□ -1.11
CAPN1-225ENST00000533704 NEDD8Q15843 81 aa8.12□□□□□ -1.11
CAPN1-225ENST00000533704 ZNF260Q3ZCT1 412 aa8.12□□□□□ -1.11
CAPN1-225ENST00000533704 CDNFQ49AH0 187 aa8.12□□□□□ -1.11
CAPN1-225ENST00000533704 ACTBL2Q562R1 376 aa8.12□□□□□ -1.11
CAPN1-225ENST00000533704 C9orf66Q5T8R8 295 aa8.12□□□□□ -1.11
CAPN1-225ENST00000533704 ZNF773Q6PK81 442 aa8.12□□□□□ -1.11
CAPN1-225ENST00000533704 PDPNQ86YL7 162 aa8.12□□□□□ -1.11
CAPN1-225ENST00000533704 MINDY2Q8NBR6 621 aa8.12□□□□□ -1.11
CAPN1-225ENST00000533704 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.12□□□□□ -1.11
CAPN1-225ENST00000533704 LFNGQ8NES3 379 aa8.12□□□□□ -1.11
CAPN1-225ENST00000533704 LGALS14Q8TCE9 139 aa8.12□□□□□ -1.11
CAPN1-225ENST00000533704 MYOZ3Q8TDC0 251 aa8.12□□□□□ -1.11
CAPN1-225ENST00000533704 ARPC1AQ92747 370 aa8.12□□□□□ -1.11
CAPN1-225ENST00000533704 TSC22D3Q99576 134 aa8.12□□□□□ -1.11
CAPN1-225ENST00000533704 RNF5Q99942 180 aa8.12□□□□□ -1.11
CAPN1-225ENST00000533704 CABLES2Q9BTV7 478 aa8.12□□□□□ -1.11
CAPN1-225ENST00000533704 ST6GALNAC5Q9BVH7 336 aa8.12□□□□□ -1.11
CAPN1-225ENST00000533704 YTHDF1Q9BYJ9 559 aaKnown RBP8.12□□□□□ -1.11
CAPN1-225ENST00000533704 ALX4Q9H161 411 aaPredicted RBP8.12□□□□□ -1.11
CAPN1-225ENST00000533704 ZNF355PQ9NSJ1 428 aa8.12□□□□□ -1.11
CAPN1-225ENST00000533704 SDHAF2Q9NX18 166 aa8.12□□□□□ -1.11
CAPN1-225ENST00000533704 DNAH3Q8TD57 4116 aa8.12□□□□□ -1.11
CAPN1-225ENST00000533704 IGKV1D-8A0A087WSZ0 117 aa8.11□□□□□ -1.11
CAPN1-225ENST00000533704 TMEM235A6NFC5 223 aa8.11□□□□□ -1.11
CAPN1-225ENST00000533704 SHOXO15266 292 aa8.11□□□□□ -1.11
CAPN1-225ENST00000533704 SPDEFO95238 335 aa8.11□□□□□ -1.11
CAPN1-225ENST00000533704 LY86O95711 162 aa8.11□□□□□ -1.11
CAPN1-225ENST00000533704 CLEC2LP0C7M8 214 aa8.11□□□□□ -1.11
CAPN1-225ENST00000533704 OR8U8P0C7N1 319 aa8.11□□□□□ -1.11
CAPN1-225ENST00000533704 EGR2P11161 476 aaPredicted RBP8.11□□□□□ -1.11
CAPN1-225ENST00000533704 CD40LGP29965 261 aa8.11□□□□□ -1.11
CAPN1-225ENST00000533704 SDC2P34741 201 aa8.11□□□□□ -1.11
CAPN1-225ENST00000533704 TPPP2P59282 170 aa8.11□□□□□ -1.11
CAPN1-225ENST00000533704 GNG2P59768 71 aa8.11□□□□□ -1.11
CAPN1-225ENST00000533704 CD69Q07108 199 aa8.11□□□□□ -1.11
CAPN1-225ENST00000533704 FXYD3Q14802 87 aa8.11□□□□□ -1.11
CAPN1-225ENST00000533704 ARL6IP1Q15041 203 aa8.11□□□□□ -1.11
CAPN1-225ENST00000533704 SFXN4Q6P4A7 337 aa8.11□□□□□ -1.11
CAPN1-225ENST00000533704 TPRA1Q86W33 373 aa8.11□□□□□ -1.11
CAPN1-225ENST00000533704 TCTEX1D1Q8N7M0 179 aa8.11□□□□□ -1.11
CAPN1-225ENST00000533704 BVESQ8NE79 360 aa8.11□□□□□ -1.11
CAPN1-225ENST00000533704 NUDCD2Q8WVJ2 157 aa8.11□□□□□ -1.11
CAPN1-225ENST00000533704 C5orf30Q96GV9 206 aa8.11□□□□□ -1.11
CAPN1-225ENST00000533704 HARBI1Q96MB7 349 aa8.11□□□□□ -1.11
CAPN1-225ENST00000533704 PRR25Q96S07 402 aa8.11□□□□□ -1.11
CAPN1-225ENST00000533704 RNF167Q9H6Y7 350 aa8.11□□□□□ -1.11
CAPN1-225ENST00000533704 ZMAT5Q9UDW3 170 aaKnown RBP8.11□□□□□ -1.11
CAPN1-225ENST00000533704 NUBP2Q9Y5Y2 271 aa8.11□□□□□ -1.11
CAPN1-225ENST00000533704 I3L521 148 aa8.1□□□□□ -1.11
CAPN1-225ENST00000533704 TRGV3P03979 118 aa8.1□□□□□ -1.11
CAPN1-225ENST00000533704 CRIP2P52943 208 aaPredicted RBP8.1□□□□□ -1.11
CAPN1-225ENST00000533704 SLURP1P55000 103 aa8.1□□□□□ -1.11
CAPN1-225ENST00000533704 PJVKQ0ZLH3 352 aa8.1□□□□□ -1.11
CAPN1-225ENST00000533704 FHL3Q13643 280 aa8.1□□□□□ -1.11
CAPN1-225ENST00000533704 RTL8BQ17RB0 113 aa8.1□□□□□ -1.11
CAPN1-225ENST00000533704 C19orf54Q5BKX5 351 aa8.1□□□□□ -1.11
CAPN1-225ENST00000533704 IDNKQ5T6J7 187 aa8.1□□□□□ -1.11
CAPN1-225ENST00000533704 ASPHD1Q5U4P2 390 aa8.1□□□□□ -1.11
CAPN1-225ENST00000533704 ZNF562Q6V9R5 426 aa8.1□□□□□ -1.11
CAPN1-225ENST00000533704 H1FOOQ8IZA3 346 aaPredicted RBP8.1□□□□□ -1.11
CAPN1-225ENST00000533704 OR5T1Q8NG75 326 aa8.1□□□□□ -1.11
CAPN1-225ENST00000533704 DCUN1D4Q92564 292 aa8.1□□□□□ -1.11
CAPN1-225ENST00000533704 TOLLIPQ9H0E2 274 aa8.1□□□□□ -1.11
CAPN1-225ENST00000533704 RHBDL2Q9NX52 303 aa8.1□□□□□ -1.11
CAPN1-225ENST00000533704 LINC01619G3V211 115 aa8.09□□□□□ -1.11
CAPN1-225ENST00000533704 OVOL1O14753 267 aa8.09□□□□□ -1.11
CAPN1-225ENST00000533704 ARPC1BO15143 372 aaKnown RBP8.09□□□□□ -1.11
CAPN1-225ENST00000533704 RAMP3O60896 148 aa8.09□□□□□ -1.11
CAPN1-225ENST00000533704 DIRAS3O95661 229 aa8.09□□□□□ -1.11
CAPN1-225ENST00000533704 CRYZL1O95825 349 aa8.09□□□□□ -1.11
CAPN1-225ENST00000533704 LGALS1P09382 135 aaKnown RBP8.09□□□□□ -1.11
CAPN1-225ENST00000533704 APELAP0DMC3 54 aa8.09□□□□□ -1.11
CAPN1-225ENST00000533704 CD36P16671 472 aa8.09□□□□□ -1.11
CAPN1-225ENST00000533704 NFYAP23511 347 aaPredicted RBP8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms