RNA–Protein interactions for RNA: ENST00000533683.6

SAMD1-202, Transcript of sterile alpha motif domain containing 1, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene SAMD1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD1-202ENST00000533683 NEUROG1Q92886 237 aa23.54■■□□□ 1.36
SAMD1-202ENST00000533683 LEAP2Q969E1 77 aa23.54■■□□□ 1.36
SAMD1-202ENST00000533683 RBKSQ9H477 322 aa23.54■■□□□ 1.36
SAMD1-202ENST00000533683 SAP30LQ9HAJ7 183 aa23.54■■□□□ 1.36
SAMD1-202ENST00000533683 CTNNBIP1Q9NSA3 81 aaPredicted RBP23.54■■□□□ 1.36
SAMD1-202ENST00000533683 MED19A0JLT2 244 aaPredicted RBP23.53■■□□□ 1.36
SAMD1-202ENST00000533683 E7EQL1 145 aa23.53■■□□□ 1.36
SAMD1-202ENST00000533683 RNASEK-C17orf49H0YIS7 233 aa23.53■■□□□ 1.36
SAMD1-202ENST00000533683 SLC31A2O15432 143 aa23.53■■□□□ 1.36
SAMD1-202ENST00000533683 RUNX1Q01196 453 aa23.53■■□□□ 1.36
SAMD1-202ENST00000533683 CD300LFQ8TDQ1 290 aa23.53■■□□□ 1.36
SAMD1-202ENST00000533683 RAB9BQ9NP90 201 aa23.53■■□□□ 1.36
SAMD1-202ENST00000533683 GFOD1Q9NXC2 390 aa23.53■■□□□ 1.36
SAMD1-202ENST00000533683 PKDREJQ9NTG1 2253 aa23.53■■□□□ 1.36
SAMD1-202ENST00000533683 TRIM77I1YAP6 450 aa23.52■■□□□ 1.36
SAMD1-202ENST00000533683 RAB29O14966 203 aa23.52■■□□□ 1.36
SAMD1-202ENST00000533683 DFFBO76075 338 aa23.52■■□□□ 1.36
SAMD1-202ENST00000533683 CD5P06127 495 aa23.52■■□□□ 1.36
SAMD1-202ENST00000533683 ARL16Q0P5N6 197 aa23.52■■□□□ 1.36
SAMD1-202ENST00000533683 C10orf91Q5T1B1 145 aa23.52■■□□□ 1.36
SAMD1-202ENST00000533683 H2BFWTQ7Z2G1 175 aa23.52■■□□□ 1.36
SAMD1-202ENST00000533683 EGLN1Q9GZT9 426 aa23.52■■□□□ 1.36
SAMD1-202ENST00000533683 F8W036 122 aa23.52■■□□□ 1.36
SAMD1-202ENST00000533683 M0R1X1 148 aa23.52■■□□□ 1.36
SAMD1-202ENST00000533683 HAPLN4Q86UW8 402 aa23.52■■□□□ 1.36
SAMD1-202ENST00000533683 RNASE6Q93091 150 aaKnown RBP23.52■■□□□ 1.36
SAMD1-202ENST00000533683 GNPNAT1Q96EK6 184 aaPredicted RBP23.52■■□□□ 1.36
SAMD1-202ENST00000533683 TMPRSS2O15393 492 aa23.51■■□□□ 1.35
SAMD1-202ENST00000533683 SPANXN5Q5MJ07 72 aa23.51■■□□□ 1.35
SAMD1-202ENST00000533683 ST6GALNAC3Q8NDV1 305 aa23.51■■□□□ 1.35
SAMD1-202ENST00000533683 FAM213BQ8TBF2 198 aa23.51■■□□□ 1.35
SAMD1-202ENST00000533683 MARCH11A6NNE9 402 aa23.51■■□□□ 1.35
SAMD1-202ENST00000533683 ITGB1BP1O14713 200 aa23.51■■□□□ 1.35
SAMD1-202ENST00000533683 ABHD14AQ9BUJ0 271 aa23.51■■□□□ 1.35
SAMD1-202ENST00000533683 UMAD1C9J7I0 102 aa23.5■■□□□ 1.35
SAMD1-202ENST00000533683 FCGR3BO75015 233 aa23.5■■□□□ 1.35
SAMD1-202ENST00000533683 SNCAP37840 140 aa23.5■■□□□ 1.35
SAMD1-202ENST00000533683 CT45A1Q5HYN5 189 aa23.5■■□□□ 1.35
SAMD1-202ENST00000533683 CT45A3Q8NHU0 189 aa23.5■■□□□ 1.35
SAMD1-202ENST00000533683 CARHSP1Q9Y2V2 147 aaKnown RBP23.5■■□□□ 1.35
SAMD1-202ENST00000533683 GUCA2BQ16661 112 aa23.5■■□□□ 1.35
SAMD1-202ENST00000533683 C1orf229Q6ZS94 237 aaPredicted RBP23.5■■□□□ 1.35
SAMD1-202ENST00000533683 CORO2AQ92828 525 aa23.5■■□□□ 1.35
SAMD1-202ENST00000533683 TRAV38-1A0A0B4J264 116 aa23.49■■□□□ 1.35
SAMD1-202ENST00000533683 A0A1W2PPE3 182 aa23.49■■□□□ 1.35
SAMD1-202ENST00000533683 FAM90A27PA6NNH2 459 aa23.49■■□□□ 1.35
SAMD1-202ENST00000533683 C9JQL5 133 aa23.49■■□□□ 1.35
SAMD1-202ENST00000533683 CCL21O00585 134 aa23.49■■□□□ 1.35
SAMD1-202ENST00000533683 RAB7AP51149 207 aa23.49■■□□□ 1.35
SAMD1-202ENST00000533683 DVL1P1P54792 670 aaPredicted RBP23.49■■□□□ 1.35
SAMD1-202ENST00000533683 R3HDM4Q96D70 268 aa23.49■■□□□ 1.35
SAMD1-202ENST00000533683 LINC00574Q9H8X3 128 aa23.49■■□□□ 1.35
SAMD1-202ENST00000533683 ATRXP46100 2492 aa23.49■■□□□ 1.35
SAMD1-202ENST00000533683 NKX6-3A6NJ46 265 aa23.48■■□□□ 1.35
SAMD1-202ENST00000533683 TMEM178BH3BS89 294 aa23.48■■□□□ 1.35
SAMD1-202ENST00000533683 COMMD1Q8N668 190 aa23.48■■□□□ 1.35
SAMD1-202ENST00000533683 SEC11CQ9BY50 192 aa23.48■■□□□ 1.35
SAMD1-202ENST00000533683 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP23.48■■□□□ 1.35
SAMD1-202ENST00000533683 ZNF729A6NN14 1252 aaPredicted RBP23.48■■□□□ 1.35
SAMD1-202ENST00000533683 IFNA5P01569 189 aa23.48■■□□□ 1.35
SAMD1-202ENST00000533683 NFYBP25208 207 aa23.48■■□□□ 1.35
SAMD1-202ENST00000533683 ZNF525Q8N782 197 aa23.48■■□□□ 1.35
SAMD1-202ENST00000533683 LINC01560Q8TB33 94 aa23.48■■□□□ 1.35
SAMD1-202ENST00000533683 CCL17Q92583 94 aa23.48■■□□□ 1.35
SAMD1-202ENST00000533683 GAB2Q9UQC2 676 aa23.48■■□□□ 1.35
SAMD1-202ENST00000533683 HPRT1P00492 218 aa23.47■■□□□ 1.35
SAMD1-202ENST00000533683 NDUFB7P17568 137 aa23.47■■□□□ 1.35
SAMD1-202ENST00000533683 HBG1P69891 147 aa23.47■■□□□ 1.35
SAMD1-202ENST00000533683 HBG2P69892 147 aa23.47■■□□□ 1.35
SAMD1-202ENST00000533683 C1orf87Q8N0U7 546 aa23.47■■□□□ 1.35
SAMD1-202ENST00000533683 SVBPQ8N300 66 aa23.47■■□□□ 1.35
SAMD1-202ENST00000533683 SCRT1Q9BWW7 348 aa23.47■■□□□ 1.35
SAMD1-202ENST00000533683 NKX6-2Q9C056 277 aaPredicted RBP23.47■■□□□ 1.35
SAMD1-202ENST00000533683 IDI2-AS1Q9NZ38 188 aa23.47■■□□□ 1.35
SAMD1-202ENST00000533683 FAM157AC9JC47 383 aa23.47■■□□□ 1.35
SAMD1-202ENST00000533683 CHRNB4P30926 498 aa23.47■■□□□ 1.35
SAMD1-202ENST00000533683 FBXL19-AS1Q494R0 122 aa23.47■■□□□ 1.35
SAMD1-202ENST00000533683 TMEM14EPQ6UXP3 125 aa23.47■■□□□ 1.35
SAMD1-202ENST00000533683 PUSL1Q8N0Z8 303 aaKnown RBP23.47■■□□□ 1.35
SAMD1-202ENST00000533683 DYNLRB1Q9NP97 96 aa23.47■■□□□ 1.35
SAMD1-202ENST00000533683 DOCK11Q5JSL3 2073 aa23.46■■□□□ 1.35
SAMD1-202ENST00000533683 PPIAL4EA0A075B759 164 aa23.46■■□□□ 1.35
SAMD1-202ENST00000533683 PPIAL4DF5H284 164 aa23.46■■□□□ 1.35
SAMD1-202ENST00000533683 MMP23AO75900 390 aa23.46■■□□□ 1.35
SAMD1-202ENST00000533683 CD3EP07766 207 aa23.46■■□□□ 1.35
SAMD1-202ENST00000533683 SFTA3P0C7M3 94 aa23.46■■□□□ 1.35
SAMD1-202ENST00000533683 PPIAL4FP0DN26 164 aa23.46■■□□□ 1.35
SAMD1-202ENST00000533683 GRNP28799 593 aaKnown RBP23.46■■□□□ 1.35
SAMD1-202ENST00000533683 TAGLNQ01995 201 aaKnown RBP23.46■■□□□ 1.35
SAMD1-202ENST00000533683 SLC25A24Q6NUK1 477 aa23.46■■□□□ 1.35
SAMD1-202ENST00000533683 THNSL2Q86YJ6 484 aa23.46■■□□□ 1.35
SAMD1-202ENST00000533683 TMEM106BQ9NUM4 274 aa23.46■■□□□ 1.35
SAMD1-202ENST00000533683 SLC25A10Q9UBX3 287 aaPredicted RBP23.46■■□□□ 1.35
SAMD1-202ENST00000533683 PPIAL4AQ9Y536 164 aa23.46■■□□□ 1.35
SAMD1-202ENST00000533683 HCFC1P51610 2035 aa23.46■■□□□ 1.35
SAMD1-202ENST00000533683 RBFOX2O43251 390 aaKnown RBP eCLIP23.45■■□□□ 1.353e-7■■■■■ 29.5
SAMD1-202ENST00000533683 RBMXL2O75526 392 aaKnown RBP23.45■■□□□ 1.35
SAMD1-202ENST00000533683 ZNF439Q8NDP4 499 aa23.45■■□□□ 1.35
SAMD1-202ENST00000533683 APOBEC3AP31941 199 aaPredicted RBP23.45■■□□□ 1.34
SAMD1-202ENST00000533683 DDB2Q92466 427 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms