RNA–Protein interactions for RNA: ENST00000533643.1

COMMD9-208, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-208ENST00000533643 DDB2Q92466 427 aa9.58□□□□□ -0.88
COMMD9-208ENST00000533643 ZDHHC16Q969W1 377 aa9.58□□□□□ -0.88
COMMD9-208ENST00000533643 ZNF486Q96H40 463 aaPredicted RBP9.58□□□□□ -0.88
COMMD9-208ENST00000533643 SCGB3A2Q96PL1 93 aa9.58□□□□□ -0.88
COMMD9-208ENST00000533643 HSD17B10Q99714 261 aaKnown RBP9.58□□□□□ -0.88
COMMD9-208ENST00000533643 SSX3Q99909 188 aa9.58□□□□□ -0.88
COMMD9-208ENST00000533643 DPAGT1Q9H3H5 408 aa9.58□□□□□ -0.88
COMMD9-208ENST00000533643 C5orf66Q9H5L9 145 aa9.58□□□□□ -0.88
COMMD9-208ENST00000533643 OCEL1Q9H607 264 aa9.58□□□□□ -0.88
COMMD9-208ENST00000533643 FAM90A9PA6NNJ1 464 aa9.57□□□□□ -0.88
COMMD9-208ENST00000533643 H0YJW9 148 aa9.57□□□□□ -0.88
COMMD9-208ENST00000533643 IGHV4-59P01825 116 aa9.57□□□□□ -0.88
COMMD9-208ENST00000533643 CD24P25063 80 aa9.57□□□□□ -0.88
COMMD9-208ENST00000533643 CD1BP29016 333 aa9.57□□□□□ -0.88
COMMD9-208ENST00000533643 BRS3P32247 399 aa9.57□□□□□ -0.88
COMMD9-208ENST00000533643 ARHGDIBP52566 201 aa9.57□□□□□ -0.88
COMMD9-208ENST00000533643 PIGPP57054 158 aa9.57□□□□□ -0.88
COMMD9-208ENST00000533643 BRWD1-AS2P59051 145 aa9.57□□□□□ -0.88
COMMD9-208ENST00000533643 AANATQ16613 207 aa9.57□□□□□ -0.88
COMMD9-208ENST00000533643 ABCA11PQ4W5N1 156 aa9.57□□□□□ -0.88
COMMD9-208ENST00000533643 FBLN7Q53RD9 439 aa9.57□□□□□ -0.88
COMMD9-208ENST00000533643 NRARPQ7Z6K4 114 aa9.57□□□□□ -0.88
COMMD9-208ENST00000533643 ADAD2Q8NCV1 583 aaKnown RBP9.57□□□□□ -0.88
COMMD9-208ENST00000533643 OR5AN1Q8NGI8 311 aa9.57□□□□□ -0.88
COMMD9-208ENST00000533643 TCTEX1D2Q8WW35 142 aa9.57□□□□□ -0.88
COMMD9-208ENST00000533643 ADTRPQ96IZ2 230 aa9.57□□□□□ -0.88
COMMD9-208ENST00000533643 SLC2A9Q9NRM0 540 aa9.57□□□□□ -0.88
COMMD9-208ENST00000533643 FLVCR2Q9UPI3 526 aa9.57□□□□□ -0.88
COMMD9-208ENST00000533643 C14orf166Q9Y224 244 aaKnown RBP9.57□□□□□ -0.88
COMMD9-208ENST00000533643 MPPED1O15442 326 aa9.56□□□□□ -0.88
COMMD9-208ENST00000533643 VENTXO95231 258 aa9.56□□□□□ -0.88
COMMD9-208ENST00000533643 TCRBP04435 133 aa9.56□□□□□ -0.88
COMMD9-208ENST00000533643 RLN1P04808 185 aa9.56□□□□□ -0.88
COMMD9-208ENST00000533643 SNRNP70P08621 437 aaKnown RBP9.56□□□□□ -0.88
COMMD9-208ENST00000533643 S100GP29377 79 aa9.56□□□□□ -0.88
COMMD9-208ENST00000533643 IER3P46695 156 aa9.56□□□□□ -0.88
COMMD9-208ENST00000533643 EBI3Q14213 229 aa9.56□□□□□ -0.88
COMMD9-208ENST00000533643 KCTD9Q7L273 389 aa9.56□□□□□ -0.88
COMMD9-208ENST00000533643 TBC1D26Q86UD7 250 aa9.56□□□□□ -0.88
COMMD9-208ENST00000533643 THNSL2Q86YJ6 484 aa9.56□□□□□ -0.88
COMMD9-208ENST00000533643 DUSP18Q8NEJ0 188 aa9.56□□□□□ -0.88
COMMD9-208ENST00000533643 OR51H1Q8NH63 302 aa9.56□□□□□ -0.88
COMMD9-208ENST00000533643 ENKURQ8TC29 256 aa9.56□□□□□ -0.88
COMMD9-208ENST00000533643 CAPSLQ8WWF8 208 aa9.56□□□□□ -0.88
COMMD9-208ENST00000533643 TMEM230Q96A57 120 aa9.56□□□□□ -0.88
COMMD9-208ENST00000533643 COPZ2Q9P299 210 aa9.56□□□□□ -0.88
COMMD9-208ENST00000533643 RNF212BA8MTL3 300 aa9.55□□□□□ -0.88
COMMD9-208ENST00000533643 H3BUX3 64 aa9.55□□□□□ -0.88
COMMD9-208ENST00000533643 H7C2Y5 167 aa9.55□□□□□ -0.88
COMMD9-208ENST00000533643 ARPC1BO15143 372 aaKnown RBP9.55□□□□□ -0.88
COMMD9-208ENST00000533643 HOXA3O43365 443 aaPredicted RBP9.55□□□□□ -0.88
COMMD9-208ENST00000533643 APOA2P02652 100 aa9.55□□□□□ -0.88
COMMD9-208ENST00000533643 SPNP16150 400 aa9.55□□□□□ -0.88
COMMD9-208ENST00000533643 F2RP25116 425 aa9.55□□□□□ -0.88
COMMD9-208ENST00000533643 MC5RP33032 325 aa9.55□□□□□ -0.88
COMMD9-208ENST00000533643 TAGLNQ01995 201 aaKnown RBP9.55□□□□□ -0.88
COMMD9-208ENST00000533643 HNF4GQ14541 408 aa9.55□□□□□ -0.88
COMMD9-208ENST00000533643 OR2B11Q5JQS5 317 aa9.55□□□□□ -0.88
COMMD9-208ENST00000533643 RBMS3Q6XE24 437 aaKnown RBP9.55□□□□□ -0.88
COMMD9-208ENST00000533643 TMED4Q7Z7H5 227 aa9.55□□□□□ -0.88
COMMD9-208ENST00000533643 SLC25A42Q86VD7 318 aa9.55□□□□□ -0.88
COMMD9-208ENST00000533643 CCDC71LQ8N9Z2 235 aa9.55□□□□□ -0.88
COMMD9-208ENST00000533643 SSMEM1Q8WWF3 244 aa9.55□□□□□ -0.88
COMMD9-208ENST00000533643 EAF1Q96JC9 268 aaPredicted RBP9.55□□□□□ -0.88
COMMD9-208ENST00000533643 RITA1Q96K30 269 aa9.55□□□□□ -0.88
COMMD9-208ENST00000533643 SLC35D1Q9NTN3 355 aa9.55□□□□□ -0.88
COMMD9-208ENST00000533643 PRELID3BQ9Y3B1 194 aa9.55□□□□□ -0.88
COMMD9-208ENST00000533643 WASHC3Q9Y3C0 194 aa9.55□□□□□ -0.88
COMMD9-208ENST00000533643 TRAV6A0A075B6T7 132 aa9.54□□□□□ -0.88
COMMD9-208ENST00000533643 TEX13DA0A0J9YY54 714 aaPredicted RBP9.54□□□□□ -0.88
COMMD9-208ENST00000533643 A6NDX4 124 aa9.54□□□□□ -0.88
COMMD9-208ENST00000533643 CRYM-AS1A6NIL9 109 aa9.54□□□□□ -0.88
COMMD9-208ENST00000533643 RAMP3O60896 148 aa9.54□□□□□ -0.88
COMMD9-208ENST00000533643 FCGR3BO75015 233 aa9.54□□□□□ -0.88
COMMD9-208ENST00000533643 MOSP00540 346 aa9.54□□□□□ -0.88
COMMD9-208ENST00000533643 IGKV1D-33P01593 117 aa9.54□□□□□ -0.88
COMMD9-208ENST00000533643 IGKV1-33P01594 117 aa9.54□□□□□ -0.88
COMMD9-208ENST00000533643 IGKV1-16P04430 117 aa9.54□□□□□ -0.88
COMMD9-208ENST00000533643 H2AFB2P0C5Z0 115 aa9.54□□□□□ -0.88
COMMD9-208ENST00000533643 FAM106CPP0CH98 169 aa9.54□□□□□ -0.88
COMMD9-208ENST00000533643 RRASP10301 218 aa9.54□□□□□ -0.88
COMMD9-208ENST00000533643 AKR1C4P17516 323 aa9.54□□□□□ -0.88
COMMD9-208ENST00000533643 CATR1Q13166 79 aa9.54□□□□□ -0.88
COMMD9-208ENST00000533643 HES1Q14469 280 aa9.54□□□□□ -0.88
COMMD9-208ENST00000533643 LY6EQ16553 131 aa9.54□□□□□ -0.88
COMMD9-208ENST00000533643 RTL8BQ17RB0 113 aa9.54□□□□□ -0.88
COMMD9-208ENST00000533643 CCBE1Q6UXH8 406 aaPredicted RBP9.54□□□□□ -0.88
COMMD9-208ENST00000533643 SPAG16Q8N0X2 631 aa9.54□□□□□ -0.88
COMMD9-208ENST00000533643 CENPSQ8N2Z9 138 aa9.54□□□□□ -0.88
COMMD9-208ENST00000533643 Q8N6K4 173 aa9.54□□□□□ -0.88
COMMD9-208ENST00000533643 OR5R1Q8NH85 324 aa9.54□□□□□ -0.88
COMMD9-208ENST00000533643 ZNF418Q8TF45 676 aaPredicted RBP9.54□□□□□ -0.88
COMMD9-208ENST00000533643 C20orf85Q9H1P6 137 aa9.54□□□□□ -0.88
COMMD9-208ENST00000533643 NAA60Q9H7X0 242 aa9.54□□□□□ -0.88
COMMD9-208ENST00000533643 ESM1Q9NQ30 184 aa9.54□□□□□ -0.88
COMMD9-208ENST00000533643 LIN7CQ9NUP9 197 aaKnown RBP9.54□□□□□ -0.88
COMMD9-208ENST00000533643 NUDT15Q9NV35 164 aa9.54□□□□□ -0.88
COMMD9-208ENST00000533643 NUBP2Q9Y5Y2 271 aa9.54□□□□□ -0.88
COMMD9-208ENST00000533643 ZFHX3Q15911 3703 aa9.53□□□□□ -0.88
COMMD9-208ENST00000533643 C3orf85A0A1B0GTC6 90 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms