RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 NAT1P18440 290 aa16.09■□□□□ 0.17
CCS-208ENST00000533244 DUTP33316 252 aaKnown RBP16.09■□□□□ 0.17
CCS-208ENST00000533244 THBS3P49746 956 aa16.09■□□□□ 0.17
CCS-208ENST00000533244 TAGLNQ01995 201 aaKnown RBP16.09■□□□□ 0.17
CCS-208ENST00000533244 CFHR3Q02985 330 aa16.09■□□□□ 0.17
CCS-208ENST00000533244 NSUN5P1Q3KNT7 163 aa16.09■□□□□ 0.17
CCS-208ENST00000533244 MZT2AQ6P582 158 aa16.09■□□□□ 0.17
CCS-208ENST00000533244 OR5AP2Q8NGF4 316 aa16.09■□□□□ 0.17
CCS-208ENST00000533244 TSSC4Q9Y5U2 329 aaPredicted RBP16.09■□□□□ 0.17
CCS-208ENST00000533244 MEIS3P1A6NDR6 274 aa16.08■□□□□ 0.16
CCS-208ENST00000533244 SLC22A5O76082 557 aa16.08■□□□□ 0.16
CCS-208ENST00000533244 PRSS3P35030 304 aa16.08■□□□□ 0.16
CCS-208ENST00000533244 PSG5Q15238 335 aa16.08■□□□□ 0.16
CCS-208ENST00000533244 LIN54Q6MZP7 749 aa16.08■□□□□ 0.16
CCS-208ENST00000533244 COMMD1Q8N668 190 aa16.08■□□□□ 0.16
CCS-208ENST00000533244 FAM110DQ8TAY7 271 aaPredicted RBP16.08■□□□□ 0.16
CCS-208ENST00000533244 ADTRPQ96IZ2 230 aa16.08■□□□□ 0.16
CCS-208ENST00000533244 GON7Q9BXV9 100 aa16.08■□□□□ 0.16
CCS-208ENST00000533244 FBXL15Q9H469 300 aa16.08■□□□□ 0.16
CCS-208ENST00000533244 NECAP2Q9NVZ3 263 aa16.08■□□□□ 0.16
CCS-208ENST00000533244 TCRBV4S1A1TA0A5B7 111 aa16.07■□□□□ 0.16
CCS-208ENST00000533244 LINC00473A8K010 186 aa16.07■□□□□ 0.16
CCS-208ENST00000533244 SLC35B1P78383 322 aa16.07■□□□□ 0.16
CCS-208ENST00000533244 GPX8Q8TED1 209 aa16.07■□□□□ 0.16
CCS-208ENST00000533244 FLYWCH2Q96CP2 140 aaKnown RBP16.07■□□□□ 0.16
CCS-208ENST00000533244 TSNAXQ99598 290 aaKnown RBP16.07■□□□□ 0.16
CCS-208ENST00000533244 OR51J1Q9H342 316 aa16.07■□□□□ 0.16
CCS-208ENST00000533244 IFT46Q9NQC8 304 aa16.07■□□□□ 0.16
CCS-208ENST00000533244 ADAM30Q9UKF2 790 aa16.07■□□□□ 0.16
CCS-208ENST00000533244 SMIM31A0A1B0GVY4 71 aa16.06■□□□□ 0.16
CCS-208ENST00000533244 J3QRK9 145 aa16.06■□□□□ 0.16
CCS-208ENST00000533244 FCER2P06734 321 aa16.06■□□□□ 0.16
CCS-208ENST00000533244 OR5H8P0DN80 308 aa16.06■□□□□ 0.16
CCS-208ENST00000533244 FCGR2CP31995 323 aa16.06■□□□□ 0.16
CCS-208ENST00000533244 EIF4EBP1Q13541 118 aaPredicted RBP16.06■□□□□ 0.16
CCS-208ENST00000533244 CDK10Q15131 360 aa16.06■□□□□ 0.16
CCS-208ENST00000533244 TMEM177Q53S58 311 aa16.06■□□□□ 0.16
CCS-208ENST00000533244 SCPEP1Q9HB40 452 aa16.06■□□□□ 0.16
CCS-208ENST00000533244 RBMX2Q9Y388 322 aaKnown RBP16.06■□□□□ 0.16
CCS-208ENST00000533244 ATP6V0E1O15342 81 aa16.05■□□□□ 0.16
CCS-208ENST00000533244 IGLV2-23P01705 113 aa16.05■□□□□ 0.16
CCS-208ENST00000533244 RRASP10301 218 aa16.05■□□□□ 0.16
CCS-208ENST00000533244 AADACP22760 399 aa16.05■□□□□ 0.16
CCS-208ENST00000533244 CRIP2P52943 208 aaPredicted RBP16.05■□□□□ 0.16
CCS-208ENST00000533244 RPS16P62249 146 aaKnown RBP16.05■□□□□ 0.16
CCS-208ENST00000533244 NDPQ00604 133 aa16.05■□□□□ 0.16
CCS-208ENST00000533244 MSMO1Q15800 293 aa16.05■□□□□ 0.16
CCS-208ENST00000533244 RNF152Q8N8N0 203 aa16.05■□□□□ 0.16
CCS-208ENST00000533244 BVESQ8NE79 360 aa16.05■□□□□ 0.16
CCS-208ENST00000533244 OR4F17Q8NGA8 305 aa16.05■□□□□ 0.16
CCS-208ENST00000533244 DYNC2LI1Q8TCX1 351 aa16.05■□□□□ 0.16
CCS-208ENST00000533244 GIMAP1Q8WWP7 306 aa16.05■□□□□ 0.16
CCS-208ENST00000533244 OR4F4Q96R69 305 aa16.05■□□□□ 0.16
CCS-208ENST00000533244 PLXNB1O43157 2135 aa16.05■□□□□ 0.16
CCS-208ENST00000533244 MEGF8Q7Z7M0 2845 aa16.04■□□□□ 0.16
CCS-208ENST00000533244 FCN1O00602 326 aa16.04■□□□□ 0.16
CCS-208ENST00000533244 PPYP01298 95 aa16.04■□□□□ 0.16
CCS-208ENST00000533244 IGHG4P01861 327 aa16.04■□□□□ 0.16
CCS-208ENST00000533244 LGALS7P47929 136 aa16.04■□□□□ 0.16
CCS-208ENST00000533244 CX3CL1P78423 397 aa16.04■□□□□ 0.16
CCS-208ENST00000533244 RTL8BQ17RB0 113 aa16.04■□□□□ 0.16
CCS-208ENST00000533244 ZNF660Q6AZW8 331 aaPredicted RBP16.04■□□□□ 0.16
CCS-208ENST00000533244 TEX38Q6PEX7 206 aa16.04■□□□□ 0.16
CCS-208ENST00000533244 OVCH2Q7RTZ1 564 aa16.04■□□□□ 0.16
CCS-208ENST00000533244 R3HDM4Q96D70 268 aa16.04■□□□□ 0.16
CCS-208ENST00000533244 MIXL1Q9H2W2 232 aa16.04■□□□□ 0.16
CCS-208ENST00000533244 CCDC59Q9P031 241 aaKnown RBP16.04■□□□□ 0.16
CCS-208ENST00000533244 METTL1Q9UBP6 276 aaKnown RBP16.04■□□□□ 0.16
CCS-208ENST00000533244 SCOCQ9UIL1 159 aa16.04■□□□□ 0.16
CCS-208ENST00000533244 MRPS7Q9Y2R9 242 aaKnown RBP16.04■□□□□ 0.16
CCS-208ENST00000533244 A0A1W2PRX2 142 aa16.03■□□□□ 0.16
CCS-208ENST00000533244 H3BMQ9 156 aa16.03■□□□□ 0.16
CCS-208ENST00000533244 SULT1C2O00338 296 aa16.03■□□□□ 0.16
CCS-208ENST00000533244 TPPPO94811 219 aa16.03■□□□□ 0.16
CCS-208ENST00000533244 CRYGBP07316 175 aa16.03■□□□□ 0.16
CCS-208ENST00000533244 VDAC1P21796 283 aa16.03■□□□□ 0.16
CCS-208ENST00000533244 PPIFP30405 207 aaKnown RBP16.03■□□□□ 0.16
CCS-208ENST00000533244 RPL23AP62750 156 aaKnown RBP16.03■□□□□ 0.16
CCS-208ENST00000533244 RPL30P62888 115 aaKnown RBP16.03■□□□□ 0.16
CCS-208ENST00000533244 FOXE3Q13461 319 aa16.03■□□□□ 0.16
CCS-208ENST00000533244 C19orf54Q5BKX5 351 aa16.03■□□□□ 0.16
CCS-208ENST00000533244 SNX29P2Q8IUI4 249 aa16.03■□□□□ 0.16
CCS-208ENST00000533244 ISOC1Q96CN7 298 aa16.03■□□□□ 0.16
CCS-208ENST00000533244 ZFP57Q9NU63 452 aa16.03■□□□□ 0.16
CCS-208ENST00000533244 FBXO7Q9Y3I1 522 aa16.03■□□□□ 0.16
CCS-208ENST00000533244 NOTCH1P46531 2555 aa16.03■□□□□ 0.16
CCS-208ENST00000533244 FAM25AB3EWG3 89 aa16.02■□□□□ 0.16
CCS-208ENST00000533244 FAM25CB3EWG5 89 aa16.02■□□□□ 0.16
CCS-208ENST00000533244 FAM25GB3EWG6 89 aa16.02■□□□□ 0.16
CCS-208ENST00000533244 SLC25A17O43808 307 aa16.02■□□□□ 0.16
CCS-208ENST00000533244 ELANEP08246 267 aa16.02■□□□□ 0.16
CCS-208ENST00000533244 TAS2R46P59540 309 aa16.02■□□□□ 0.16
CCS-208ENST00000533244 CBX3Q13185 183 aa16.02■□□□□ 0.16
CCS-208ENST00000533244 DYRK1AQ13627 763 aa16.02■□□□□ 0.16
CCS-208ENST00000533244 PLGLAQ15195 96 aa16.02■□□□□ 0.16
CCS-208ENST00000533244 DHRS11Q6UWP2 260 aa16.02■□□□□ 0.16
CCS-208ENST00000533244 LYSMD2Q8IV50 215 aa16.02■□□□□ 0.16
CCS-208ENST00000533244 HARBI1Q96MB7 349 aa16.02■□□□□ 0.16
CCS-208ENST00000533244 PARP11Q9NR21 331 aa16.02■□□□□ 0.16
CCS-208ENST00000533244 TPSG1Q9NRR2 321 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms