RNA–Protein interactions for RNA: ENST00000532029.6

LRRK1-208, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best) BASIC

Gene LRRK1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-208ENST00000532029 MSMO1Q15800 293 aa17.8■□□□□ 0.44
LRRK1-208ENST00000532029 ZNF383Q8NA42 475 aa17.8■□□□□ 0.44
LRRK1-208ENST00000532029 ZBTB34Q8NCN2 500 aa17.8■□□□□ 0.44
LRRK1-208ENST00000532029 OR4F5Q8NH21 305 aa17.8■□□□□ 0.44
LRRK1-208ENST00000532029 TAF15Q92804 592 aaKnown RBP eCLIP17.8■□□□□ 0.44
LRRK1-208ENST00000532029 RANBP3Q9H6Z4 567 aaPredicted RBP17.8■□□□□ 0.44
LRRK1-208ENST00000532029 ANKRD20A5PA0PJZ0 165 aa17.79■□□□□ 0.44
LRRK1-208ENST00000532029 NCBP2LA6PVI3 153 aaKnown RBP17.79■□□□□ 0.44
LRRK1-208ENST00000532029 DUTP33316 252 aaKnown RBP17.79■□□□□ 0.44
LRRK1-208ENST00000532029 LINC00205P59089 165 aa17.79■□□□□ 0.44
LRRK1-208ENST00000532029 ZNF45Q02386 682 aa17.79■□□□□ 0.44
LRRK1-208ENST00000532029 CBX3Q13185 183 aa17.79■□□□□ 0.44
LRRK1-208ENST00000532029 LINC00299Q6ZSB3 139 aa17.79■□□□□ 0.44
LRRK1-208ENST00000532029 PDPNQ86YL7 162 aa17.79■□□□□ 0.44
LRRK1-208ENST00000532029 Q8N6K4 173 aa17.79■□□□□ 0.44
LRRK1-208ENST00000532029 GDPD1Q8N9F7 314 aa17.79■□□□□ 0.44
LRRK1-208ENST00000532029 OR8H1Q8NGG4 311 aa17.79■□□□□ 0.44
LRRK1-208ENST00000532029 SRRQ9GZT4 340 aa17.79■□□□□ 0.44
LRRK1-208ENST00000532029 FXYD6Q9H0Q3 95 aa17.79■□□□□ 0.44
LRRK1-208ENST00000532029 SLC35D1Q9NTN3 355 aa17.79■□□□□ 0.44
LRRK1-208ENST00000532029 DISC1C4P0D8 188 aa17.78■□□□□ 0.44
LRRK1-208ENST00000532029 IGLV2-14P01704 120 aa17.78■□□□□ 0.44
LRRK1-208ENST00000532029 AMY2AP04746 511 aa17.78■□□□□ 0.44
LRRK1-208ENST00000532029 AP3S2P59780 193 aa17.78■□□□□ 0.44
LRRK1-208ENST00000532029 RELBQ01201 579 aa17.78■□□□□ 0.44
LRRK1-208ENST00000532029 FOXL1Q12952 345 aa17.78■□□□□ 0.44
LRRK1-208ENST00000532029 RTL8BQ17RB0 113 aa17.78■□□□□ 0.44
LRRK1-208ENST00000532029 Q6ZSV7 163 aa17.78■□□□□ 0.44
LRRK1-208ENST00000532029 KCTD9Q7L273 389 aa17.78■□□□□ 0.44
LRRK1-208ENST00000532029 OR4D10Q8NGI6 311 aa17.78■□□□□ 0.44
LRRK1-208ENST00000532029 HSD17B10Q99714 261 aaKnown RBP17.78■□□□□ 0.44
LRRK1-208ENST00000532029 PRSS22Q9GZN4 317 aa17.78■□□□□ 0.44
LRRK1-208ENST00000532029 TMEM89A2RUT3 159 aa17.77■□□□□ 0.44
LRRK1-208ENST00000532029 FGF16O43320 207 aa17.77■□□□□ 0.44
LRRK1-208ENST00000532029 TSPAN9O75954 239 aa17.77■□□□□ 0.44
LRRK1-208ENST00000532029 RRASP10301 218 aa17.77■□□□□ 0.44
LRRK1-208ENST00000532029 MMDQ15546 238 aa17.77■□□□□ 0.44
LRRK1-208ENST00000532029 SCGB2B2Q4G0G5 96 aa17.77■□□□□ 0.44
LRRK1-208ENST00000532029 LPCAT3Q6P1A2 487 aa17.77■□□□□ 0.44
LRRK1-208ENST00000532029 ZNF66Q6ZN08 573 aa17.77■□□□□ 0.44
LRRK1-208ENST00000532029 TOMM5Q8N4H5 51 aa17.77■□□□□ 0.44
LRRK1-208ENST00000532029 TRIM63Q969Q1 353 aa17.77■□□□□ 0.44
LRRK1-208ENST00000532029 RBMXL1Q96E39 390 aaKnown RBP17.77■□□□□ 0.44
LRRK1-208ENST00000532029 PRELID3BQ9Y3B1 194 aa17.77■□□□□ 0.44
LRRK1-208ENST00000532029 LINC00473A8K010 186 aa17.76■□□□□ 0.43
LRRK1-208ENST00000532029 FAUP35544 74 aaKnown RBP17.76■□□□□ 0.43
LRRK1-208ENST00000532029 INPP1P49441 399 aa17.76■□□□□ 0.43
LRRK1-208ENST00000532029 ARSJQ5FYB0 599 aaPredicted RBP17.76■□□□□ 0.43
LRRK1-208ENST00000532029 FAAP20Q6NZ36 180 aa17.76■□□□□ 0.43
LRRK1-208ENST00000532029 ZNF818PQ6ZRF7 136 aa17.76■□□□□ 0.43
LRRK1-208ENST00000532029 BVESQ8NE79 360 aa17.76■□□□□ 0.43
LRRK1-208ENST00000532029 OR4C16Q8NGL9 310 aa17.76■□□□□ 0.43
LRRK1-208ENST00000532029 TCTEX1D2Q8WW35 142 aa17.76■□□□□ 0.43
LRRK1-208ENST00000532029 FLYWCH2Q96CP2 140 aaKnown RBP17.76■□□□□ 0.43
LRRK1-208ENST00000532029 BEX1Q9HBH7 125 aa17.76■□□□□ 0.43
LRRK1-208ENST00000532029 ATRQ13535 2644 aa17.76■□□□□ 0.43
LRRK1-208ENST00000532029 GPR31O00270 319 aa17.75■□□□□ 0.43
LRRK1-208ENST00000532029 TNFSF12O43508 249 aa17.75■□□□□ 0.43
LRRK1-208ENST00000532029 PGAM2P15259 253 aa17.75■□□□□ 0.43
LRRK1-208ENST00000532029 GNRHRP30968 328 aa17.75■□□□□ 0.43
LRRK1-208ENST00000532029 RPS16P62249 146 aaKnown RBP17.75■□□□□ 0.43
LRRK1-208ENST00000532029 BLCAPP62952 87 aa17.75■□□□□ 0.43
LRRK1-208ENST00000532029 CATR1Q13166 79 aa17.75■□□□□ 0.43
LRRK1-208ENST00000532029 ABCA11PQ4W5N1 156 aa17.75■□□□□ 0.43
LRRK1-208ENST00000532029 TRIQKQ629K1 86 aa17.75■□□□□ 0.43
LRRK1-208ENST00000532029 LHFPL1Q86WI0 220 aa17.75■□□□□ 0.43
LRRK1-208ENST00000532029 CMTM1Q8IZ96 169 aa17.75■□□□□ 0.43
LRRK1-208ENST00000532029 MFSD4AQ8N468 514 aa17.75■□□□□ 0.43
LRRK1-208ENST00000532029 C5orf56Q8N8D9 126 aa17.75■□□□□ 0.43
LRRK1-208ENST00000532029 OR2T6Q8NHC8 308 aa17.75■□□□□ 0.43
LRRK1-208ENST00000532029 S100ZQ8WXG8 99 aa17.75■□□□□ 0.43
LRRK1-208ENST00000532029 RNF5Q99942 180 aa17.75■□□□□ 0.43
LRRK1-208ENST00000532029 C16orf95Q9H693 158 aa17.75■□□□□ 0.43
LRRK1-208ENST00000532029 KIAA1456Q9P272 454 aa17.75■□□□□ 0.43
LRRK1-208ENST00000532029 FBN1P35555 2871 aaKnown RBP17.74■□□□□ 0.43
LRRK1-208ENST00000532029 A0A1B0GUS0 222 aa17.74■□□□□ 0.43
LRRK1-208ENST00000532029 NBR2O15453 112 aa17.74■□□□□ 0.43
LRRK1-208ENST00000532029 ZNF735P0CB33 412 aa17.74■□□□□ 0.43
LRRK1-208ENST00000532029 S100GP29377 79 aa17.74■□□□□ 0.43
LRRK1-208ENST00000532029 F2RL1P55085 397 aa17.74■□□□□ 0.43
LRRK1-208ENST00000532029 UCP3P55916 312 aa17.74■□□□□ 0.43
LRRK1-208ENST00000532029 RPL30P62888 115 aaKnown RBP17.74■□□□□ 0.43
LRRK1-208ENST00000532029 EIF4EBP1Q13541 118 aaPredicted RBP17.74■□□□□ 0.43
LRRK1-208ENST00000532029 C9orf152Q5JTZ5 239 aa17.74■□□□□ 0.43
LRRK1-208ENST00000532029 AADACL3Q5VUY0 350 aa17.74■□□□□ 0.43
LRRK1-208ENST00000532029 ZNF57Q68EA5 555 aaPredicted RBP17.74■□□□□ 0.43
LRRK1-208ENST00000532029 C11orf88Q6PI97 169 aa17.74■□□□□ 0.43
LRRK1-208ENST00000532029 SLC38A6Q8IZM9 456 aa17.74■□□□□ 0.43
LRRK1-208ENST00000532029 TERB2Q8NHR7 220 aa17.74■□□□□ 0.43
LRRK1-208ENST00000532029 DDB2Q92466 427 aa17.74■□□□□ 0.43
LRRK1-208ENST00000532029 RITA1Q96K30 269 aa17.74■□□□□ 0.43
LRRK1-208ENST00000532029 RASL11BQ9BPW5 248 aa17.74■□□□□ 0.43
LRRK1-208ENST00000532029 ZNF702PQ9H963 129 aa17.74■□□□□ 0.43
LRRK1-208ENST00000532029 AKIP1Q9NQ31 210 aa17.74■□□□□ 0.43
LRRK1-208ENST00000532029 MCUBQ9NWR8 336 aa17.74■□□□□ 0.43
LRRK1-208ENST00000532029 FCGR3BO75015 233 aa17.73■□□□□ 0.43
LRRK1-208ENST00000532029 PEX14O75381 377 aa17.73■□□□□ 0.43
LRRK1-208ENST00000532029 IGKV1-16P04430 117 aa17.73■□□□□ 0.43
LRRK1-208ENST00000532029 MDKP21741 143 aaPredicted RBP17.73■□□□□ 0.43
LRRK1-208ENST00000532029 PPP5CP53041 499 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms