RNA–Protein interactions for RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 CCDC107Q8WV48 283 aa13.47□□□□□ -0.25
PKP3-208ENST00000531857 ARL11Q969Q4 196 aa13.47□□□□□ -0.25
PKP3-208ENST00000531857 GPER1Q99527 375 aa13.47□□□□□ -0.25
PKP3-208ENST00000531857 KLK15Q9H2R5 256 aa13.47□□□□□ -0.25
PKP3-208ENST00000531857 GNB4Q9HAV0 340 aa13.47□□□□□ -0.25
PKP3-208ENST00000531857 GFOD1Q9NXC2 390 aa13.47□□□□□ -0.25
PKP3-208ENST00000531857 EPPK1P58107 5090 aaKnown RBP13.46□□□□□ -0.25
PKP3-208ENST00000531857 INMT-MINDY4F8WBC2 141 aa13.46□□□□□ -0.25
PKP3-208ENST00000531857 PRAF2O60831 178 aa13.46□□□□□ -0.25
PKP3-208ENST00000531857 IGF1P05019 195 aa13.46□□□□□ -0.25
PKP3-208ENST00000531857 SPNP16150 400 aa13.46□□□□□ -0.25
PKP3-208ENST00000531857 CLDN12P56749 244 aa13.46□□□□□ -0.25
PKP3-208ENST00000531857 KLF9Q13886 244 aaPredicted RBP13.46□□□□□ -0.25
PKP3-208ENST00000531857 ASCL4Q6XD76 172 aa13.46□□□□□ -0.25
PKP3-208ENST00000531857 C8orf31Q8N9H6 132 aa13.46□□□□□ -0.25
PKP3-208ENST00000531857 OR52M1Q8NGK5 317 aa13.46□□□□□ -0.25
PKP3-208ENST00000531857 OR1N2Q8NGR9 330 aa13.46□□□□□ -0.25
PKP3-208ENST00000531857 OR5B12Q96R08 314 aa13.46□□□□□ -0.25
PKP3-208ENST00000531857 URM1Q9BTM9 101 aaKnown RBP13.46□□□□□ -0.25
PKP3-208ENST00000531857 CST11Q9H112 138 aa13.46□□□□□ -0.25
PKP3-208ENST00000531857 ATG5Q9H1Y0 275 aa13.46□□□□□ -0.25
PKP3-208ENST00000531857 MTFP1Q9UDX5 166 aa13.46□□□□□ -0.25
PKP3-208ENST00000531857 ST3GAL6Q9Y274 331 aa13.46□□□□□ -0.25
PKP3-208ENST00000531857 LINC00854A0A1B0GVQ3 168 aa13.45□□□□□ -0.26
PKP3-208ENST00000531857 ANKRD20A5PA0PJZ0 165 aa13.45□□□□□ -0.26
PKP3-208ENST00000531857 TMEM30CPA0ZSE6 113 aa13.45□□□□□ -0.26
PKP3-208ENST00000531857 I3L521 148 aa13.45□□□□□ -0.26
PKP3-208ENST00000531857 OR7C1O76099 320 aaPredicted RBP13.45□□□□□ -0.26
PKP3-208ENST00000531857 GNB1P62873 340 aa13.45□□□□□ -0.26
PKP3-208ENST00000531857 ZNF491Q8N8L2 437 aa13.45□□□□□ -0.26
PKP3-208ENST00000531857 S100A13Q99584 98 aa13.45□□□□□ -0.26
PKP3-208ENST00000531857 IFT22Q9H7X7 185 aa13.45□□□□□ -0.26
PKP3-208ENST00000531857 LCE6AA0A183 80 aa13.44□□□□□ -0.26
PKP3-208ENST00000531857 G3V318 75 aa13.44□□□□□ -0.26
PKP3-208ENST00000531857 GEMIN2O14893 280 aaKnown RBP13.44□□□□□ -0.26
PKP3-208ENST00000531857 ZNF780AO75290 641 aaPredicted RBP13.44□□□□□ -0.26
PKP3-208ENST00000531857 CD3GP09693 182 aa13.44□□□□□ -0.26
PKP3-208ENST00000531857 OR8U8P0C7N1 319 aa13.44□□□□□ -0.26
PKP3-208ENST00000531857 FRMD6-AS1P0C7T7 363 aa13.44□□□□□ -0.26
PKP3-208ENST00000531857 LYL1P12980 280 aa13.44□□□□□ -0.26
PKP3-208ENST00000531857 PPIFP30405 207 aaKnown RBP13.44□□□□□ -0.26
PKP3-208ENST00000531857 INSL3P51460 131 aa13.44□□□□□ -0.26
PKP3-208ENST00000531857 ZNF134P52741 427 aa13.44□□□□□ -0.26
PKP3-208ENST00000531857 RBM11P57052 281 aaKnown RBP13.44□□□□□ -0.26
PKP3-208ENST00000531857 ZNF616Q08AN1 781 aa13.44□□□□□ -0.26
PKP3-208ENST00000531857 ZNF439Q8NDP4 499 aa13.44□□□□□ -0.26
PKP3-208ENST00000531857 OR8H1Q8NGG4 311 aa13.44□□□□□ -0.26
PKP3-208ENST00000531857 OR52I2Q8NH67 350 aa13.44□□□□□ -0.26
PKP3-208ENST00000531857 UBE2E2Q96LR5 201 aa13.44□□□□□ -0.26
PKP3-208ENST00000531857 NEDD4LQ96PU5 975 aa13.44□□□□□ -0.26
PKP3-208ENST00000531857 ZNF580Q9UK33 172 aa13.44□□□□□ -0.26
PKP3-208ENST00000531857 ING4Q9UNL4 249 aa13.44□□□□□ -0.26
PKP3-208ENST00000531857 WSB1Q9Y6I7 421 aa13.44□□□□□ -0.26
PKP3-208ENST00000531857 SACSQ9NZJ4 4579 aa13.43□□□□□ -0.26
PKP3-208ENST00000531857 TRAV18A0A075B6X5 111 aa13.43□□□□□ -0.26
PKP3-208ENST00000531857 TMEM14DPA8MWL7 114 aa13.43□□□□□ -0.26
PKP3-208ENST00000531857 GSTP1P09211 210 aaKnown RBP13.43□□□□□ -0.26
PKP3-208ENST00000531857 TBPP20226 339 aa13.43□□□□□ -0.26
PKP3-208ENST00000531857 IL3RAP26951 378 aa13.43□□□□□ -0.26
PKP3-208ENST00000531857 RUNX1Q01196 453 aa13.43□□□□□ -0.26
PKP3-208ENST00000531857 AWAT2Q6E213 333 aa13.43□□□□□ -0.26
PKP3-208ENST00000531857 SLC25A48Q6ZT89 311 aaKnown RBP13.43□□□□□ -0.26
PKP3-208ENST00000531857 DCUN1D4Q92564 292 aa13.43□□□□□ -0.26
PKP3-208ENST00000531857 AUNIPQ9H7T9 357 aa13.43□□□□□ -0.26
PKP3-208ENST00000531857 MRPS28Q9Y2Q9 187 aaKnown RBP13.43□□□□□ -0.26
PKP3-208ENST00000531857 CCNKO75909 580 aa13.42□□□□□ -0.26
PKP3-208ENST00000531857 IGLV1-40P01703 118 aa13.42□□□□□ -0.26
PKP3-208ENST00000531857 MT-ND4P03905 459 aa13.42□□□□□ -0.26
PKP3-208ENST00000531857 TCRBP04435 133 aa13.42□□□□□ -0.26
PKP3-208ENST00000531857 OR5H8P0DN80 308 aa13.42□□□□□ -0.26
PKP3-208ENST00000531857 RCVRNP35243 200 aa13.42□□□□□ -0.26
PKP3-208ENST00000531857 CBX5P45973 191 aa13.42□□□□□ -0.26
PKP3-208ENST00000531857 ZNF137PP52743 207 aa13.42□□□□□ -0.26
PKP3-208ENST00000531857 TAS2R19P59542 299 aa13.42□□□□□ -0.26
PKP3-208ENST00000531857 CT45A1Q5HYN5 189 aa13.42□□□□□ -0.26
PKP3-208ENST00000531857 NHLRC3Q5JS37 347 aa13.42□□□□□ -0.26
PKP3-208ENST00000531857 ATAD3CQ5T2N8 411 aa13.42□□□□□ -0.26
PKP3-208ENST00000531857 TMEM65Q6PI78 240 aa13.42□□□□□ -0.26
PKP3-208ENST00000531857 ZNF497Q6ZNH5 498 aa13.42□□□□□ -0.26
PKP3-208ENST00000531857 ZNF429Q86V71 674 aa13.42□□□□□ -0.26
PKP3-208ENST00000531857 TMEM229BQ8NBD8 167 aa13.42□□□□□ -0.26
PKP3-208ENST00000531857 OR56B1Q8NGI3 324 aa13.42□□□□□ -0.26
PKP3-208ENST00000531857 CT45A3Q8NHU0 189 aa13.42□□□□□ -0.26
PKP3-208ENST00000531857 GPX8Q8TED1 209 aa13.42□□□□□ -0.26
PKP3-208ENST00000531857 MRPS24Q96EL2 167 aaKnown RBP13.42□□□□□ -0.26
PKP3-208ENST00000531857 ALX4Q9H161 411 aaPredicted RBP13.42□□□□□ -0.26
PKP3-208ENST00000531857 IL36GQ9NZH8 169 aa13.42□□□□□ -0.26
PKP3-208ENST00000531857 VSIG4Q9Y279 399 aa13.42□□□□□ -0.26
PKP3-208ENST00000531857 CSMD3Q7Z407 3707 aa13.41□□□□□ -0.26
PKP3-208ENST00000531857 A0A1W2PP11 408 aa13.41□□□□□ -0.26
PKP3-208ENST00000531857 OVOL1O14753 267 aa13.41□□□□□ -0.26
PKP3-208ENST00000531857 ATP6V0E1O15342 81 aa13.41□□□□□ -0.26
PKP3-208ENST00000531857 TXNL1O43396 289 aa13.41□□□□□ -0.26
PKP3-208ENST00000531857 LANCL1O43813 399 aa13.41□□□□□ -0.26
PKP3-208ENST00000531857 CA11O75493 328 aa13.41□□□□□ -0.26
PKP3-208ENST00000531857 SNAPC5O75971 98 aa13.41□□□□□ -0.26
PKP3-208ENST00000531857 AKAIN1P0CW23 69 aa13.41□□□□□ -0.26
PKP3-208ENST00000531857 SERPINA2P20848 420 aa13.41□□□□□ -0.26
PKP3-208ENST00000531857 QRFPP83859 136 aa13.41□□□□□ -0.26
PKP3-208ENST00000531857 TATDN3Q17R31 274 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms