RNA–Protein interactions for RNA: ENST00000531041.1

SF3B2-211, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 1 (best)

Gene SF3B2, Length 1,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-211ENST00000531041 CAPSLQ8WWF8 208 aa13.58□□□□□ -0.24
SF3B2-211ENST00000531041 HSD17B10Q99714 261 aaKnown RBP13.58□□□□□ -0.24
SF3B2-211ENST00000531041 PITPNC1Q9UKF7 332 aa13.58□□□□□ -0.24
SF3B2-211ENST00000531041 VPREB3Q9UKI3 123 aa13.58□□□□□ -0.24
SF3B2-211ENST00000531041 TCF19Q9Y242 345 aa13.58□□□□□ -0.24
SF3B2-211ENST00000531041 H0YJW9 148 aa13.57□□□□□ -0.24
SF3B2-211ENST00000531041 GPR31O00270 319 aa13.57□□□□□ -0.24
SF3B2-211ENST00000531041 SNRNP70P08621 437 aaKnown RBP13.57□□□□□ -0.24
SF3B2-211ENST00000531041 GLDNQ6ZMI3 551 aaPredicted RBP13.57□□□□□ -0.24
SF3B2-211ENST00000531041 IDO2Q6ZQW0 420 aa13.57□□□□□ -0.24
SF3B2-211ENST00000531041 CMTM1Q8IZ96 169 aa13.57□□□□□ -0.24
SF3B2-211ENST00000531041 DDB2Q92466 427 aa13.57□□□□□ -0.24
SF3B2-211ENST00000531041 ZNF486Q96H40 463 aaPredicted RBP13.57□□□□□ -0.24
SF3B2-211ENST00000531041 TSC22D3Q99576 134 aa13.57□□□□□ -0.24
SF3B2-211ENST00000531041 LINC00854A0A1B0GVQ3 168 aa13.56□□□□□ -0.24
SF3B2-211ENST00000531041 A6NDX4 124 aa13.56□□□□□ -0.24
SF3B2-211ENST00000531041 LINC00473A8K010 186 aa13.56□□□□□ -0.24
SF3B2-211ENST00000531041 CENPXA8MT69 81 aa13.56□□□□□ -0.24
SF3B2-211ENST00000531041 PLA2G10O15496 165 aa13.56□□□□□ -0.24
SF3B2-211ENST00000531041 IGKV1D-33P01593 117 aa13.56□□□□□ -0.24
SF3B2-211ENST00000531041 IGKV1-33P01594 117 aa13.56□□□□□ -0.24
SF3B2-211ENST00000531041 PGAM2P15259 253 aa13.56□□□□□ -0.24
SF3B2-211ENST00000531041 SURF2Q15527 256 aaPredicted RBP13.56□□□□□ -0.24
SF3B2-211ENST00000531041 LIAT1Q6ZQX7 453 aa13.56□□□□□ -0.24
SF3B2-211ENST00000531041 OR2T10Q8NGZ9 312 aa13.56□□□□□ -0.24
SF3B2-211ENST00000531041 ZFAND1Q8TCF1 268 aa13.56□□□□□ -0.24
SF3B2-211ENST00000531041 MARCH1Q8TCQ1 289 aa13.56□□□□□ -0.24
SF3B2-211ENST00000531041 DUX5Q96PT3 197 aa13.56□□□□□ -0.24
SF3B2-211ENST00000531041 CHIAQ9BZP6 476 aa13.56□□□□□ -0.24
SF3B2-211ENST00000531041 WASHC3Q9Y3C0 194 aa13.56□□□□□ -0.24
SF3B2-211ENST00000531041 MOSP00540 346 aa13.56□□□□□ -0.24
SF3B2-211ENST00000531041 APOA2P02652 100 aa13.56□□□□□ -0.24
SF3B2-211ENST00000531041 RNASE1P07998 156 aaKnown RBP13.56□□□□□ -0.24
SF3B2-211ENST00000531041 RPL30P62888 115 aaKnown RBP13.56□□□□□ -0.24
SF3B2-211ENST00000531041 UBA52P62987 128 aaKnown RBP13.56□□□□□ -0.24
SF3B2-211ENST00000531041 HES1Q14469 280 aa13.56□□□□□ -0.24
SF3B2-211ENST00000531041 LY6EQ16553 131 aa13.56□□□□□ -0.24
SF3B2-211ENST00000531041 FBLN7Q53RD9 439 aa13.56□□□□□ -0.24
SF3B2-211ENST00000531041 CCBE1Q6UXH8 406 aaPredicted RBP13.56□□□□□ -0.24
SF3B2-211ENST00000531041 KCTD9Q7L273 389 aa13.56□□□□□ -0.24
SF3B2-211ENST00000531041 EAF1Q96JC9 268 aaPredicted RBP13.56□□□□□ -0.24
SF3B2-211ENST00000531041 GPHA2Q96T91 129 aa13.56□□□□□ -0.24
SF3B2-211ENST00000531041 TNFRSF19Q9NS68 423 aa13.56□□□□□ -0.24
SF3B2-211ENST00000531041 JMJD1CQ15652 2540 aa13.55□□□□□ -0.24
SF3B2-211ENST00000531041 H7C2Y5 167 aa13.55□□□□□ -0.24
SF3B2-211ENST00000531041 LYRM1O43325 122 aa13.55□□□□□ -0.24
SF3B2-211ENST00000531041 TNFSF12O43508 249 aa13.55□□□□□ -0.24
SF3B2-211ENST00000531041 PGLYRP1O75594 196 aaPredicted RBP13.55□□□□□ -0.24
SF3B2-211ENST00000531041 CTSDP07339 412 aaPredicted RBP13.55□□□□□ -0.24
SF3B2-211ENST00000531041 RRASP10301 218 aa13.55□□□□□ -0.24
SF3B2-211ENST00000531041 S100GP29377 79 aa13.55□□□□□ -0.24
SF3B2-211ENST00000531041 RND3P61587 244 aa13.55□□□□□ -0.24
SF3B2-211ENST00000531041 IFITM3Q01628 133 aa13.55□□□□□ -0.24
SF3B2-211ENST00000531041 CATR1Q13166 79 aa13.55□□□□□ -0.24
SF3B2-211ENST00000531041 PHLDA2Q53GA4 152 aa13.55□□□□□ -0.24
SF3B2-211ENST00000531041 C16orf87Q6PH81 154 aa13.55□□□□□ -0.24
SF3B2-211ENST00000531041 PDPNQ86YL7 162 aa13.55□□□□□ -0.24
SF3B2-211ENST00000531041 Q8N6K4 173 aa13.55□□□□□ -0.24
SF3B2-211ENST00000531041 SCGB3A2Q96PL1 93 aa13.55□□□□□ -0.24
SF3B2-211ENST00000531041 SLC25A21Q9BQT8 299 aaPredicted RBP13.55□□□□□ -0.24
SF3B2-211ENST00000531041 SLC2A9Q9NRM0 540 aa13.55□□□□□ -0.24
SF3B2-211ENST00000531041 SLC35D1Q9NTN3 355 aa13.55□□□□□ -0.24
SF3B2-211ENST00000531041 GPR132Q9UNW8 380 aa13.55□□□□□ -0.24
SF3B2-211ENST00000531041 PRELID3BQ9Y3B1 194 aa13.55□□□□□ -0.24
SF3B2-211ENST00000531041 TRIM77I1YAP6 450 aa13.54□□□□□ -0.24
SF3B2-211ENST00000531041 TMEM11P17152 192 aa13.54□□□□□ -0.24
SF3B2-211ENST00000531041 BTCP35070 178 aa13.54□□□□□ -0.24
SF3B2-211ENST00000531041 RTL8BQ17RB0 113 aa13.54□□□□□ -0.24
SF3B2-211ENST00000531041 C16orf82Q7Z2V1 217 aa13.54□□□□□ -0.24
SF3B2-211ENST00000531041 TMEM219Q86XT9 240 aa13.54□□□□□ -0.24
SF3B2-211ENST00000531041 TCTEX1D2Q8WW35 142 aa13.54□□□□□ -0.24
SF3B2-211ENST00000531041 RBM14Q96PK6 669 aaKnown RBP13.54□□□□□ -0.24
SF3B2-211ENST00000531041 RAB18Q9NP72 206 aa13.54□□□□□ -0.24
SF3B2-211ENST00000531041 RNF212BA8MTL3 300 aa13.53□□□□□ -0.24
SF3B2-211ENST00000531041 GPR137BO60478 399 aa13.53□□□□□ -0.24
SF3B2-211ENST00000531041 OR2F2O95006 317 aa13.53□□□□□ -0.24
SF3B2-211ENST00000531041 PI3P19957 117 aa13.53□□□□□ -0.24
SF3B2-211ENST00000531041 PIGPP57054 158 aa13.53□□□□□ -0.24
SF3B2-211ENST00000531041 RPL15P61313 204 aaKnown RBP13.53□□□□□ -0.24
SF3B2-211ENST00000531041 ASAH1Q13510 395 aa13.53□□□□□ -0.24
SF3B2-211ENST00000531041 HNF4GQ14541 408 aa13.53□□□□□ -0.24
SF3B2-211ENST00000531041 RBMS2Q15434 407 aaKnown RBP13.53□□□□□ -0.24
SF3B2-211ENST00000531041 ABCA11PQ4W5N1 156 aa13.53□□□□□ -0.24
SF3B2-211ENST00000531041 PRIMA1Q86XR5 153 aa13.53□□□□□ -0.24
SF3B2-211ENST00000531041 OR4C13Q8NGP0 309 aa13.53□□□□□ -0.24
SF3B2-211ENST00000531041 RBMXL1Q96E39 390 aaKnown RBP13.53□□□□□ -0.24
SF3B2-211ENST00000531041 RNF5Q99942 180 aa13.53□□□□□ -0.24
SF3B2-211ENST00000531041 RTBDNQ9BSG5 229 aaPredicted RBP13.53□□□□□ -0.24
SF3B2-211ENST00000531041 SLC25A33Q9BSK2 321 aa13.53□□□□□ -0.24
SF3B2-211ENST00000531041 C5orf66Q9H5L9 145 aa13.53□□□□□ -0.24
SF3B2-211ENST00000531041 TBC1D24Q9ULP9 559 aa13.53□□□□□ -0.24
SF3B2-211ENST00000531041 C14orf166Q9Y224 244 aaKnown RBP13.53□□□□□ -0.24
SF3B2-211ENST00000531041 CHST1O43916 411 aa13.52□□□□□ -0.25
SF3B2-211ENST00000531041 IGKV1-16P04430 117 aa13.52□□□□□ -0.25
SF3B2-211ENST00000531041 RLN1P04808 185 aa13.52□□□□□ -0.25
SF3B2-211ENST00000531041 F2RP25116 425 aa13.52□□□□□ -0.25
SF3B2-211ENST00000531041 KIR2DS2P43631 304 aa13.52□□□□□ -0.25
SF3B2-211ENST00000531041 CCR6P51684 374 aa13.52□□□□□ -0.25
SF3B2-211ENST00000531041 BRWD1-AS2P59051 145 aa13.52□□□□□ -0.25
SF3B2-211ENST00000531041 CBX3Q13185 183 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms