RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 CORO2AQ92828 525 aa4.62□□□□□ -1.67
PCF11-205ENST00000530906 RAB39BQ96DA2 213 aa4.62□□□□□ -1.67
PCF11-205ENST00000530906 CLCC1Q96S66 551 aa4.62□□□□□ -1.67
PCF11-205ENST00000530906 VKORC1Q9BQB6 163 aa4.62□□□□□ -1.67
PCF11-205ENST00000530906 ZNF251Q9BRH9 671 aa4.62□□□□□ -1.67
PCF11-205ENST00000530906 AGMATQ9BSE5 352 aa4.62□□□□□ -1.67
PCF11-205ENST00000530906 SMIM3Q9BZL3 60 aa4.62□□□□□ -1.67
PCF11-205ENST00000530906 ZNF665Q9H7R5 613 aa4.62□□□□□ -1.67
PCF11-205ENST00000530906 WFDC1Q9HC57 220 aa4.62□□□□□ -1.67
PCF11-205ENST00000530906 UFSP2Q9NUQ7 469 aa4.62□□□□□ -1.67
PCF11-205ENST00000530906 PSENENQ9NZ42 101 aa4.62□□□□□ -1.67
PCF11-205ENST00000530906 GNG12Q9UBI6 72 aa4.62□□□□□ -1.67
PCF11-205ENST00000530906 NDRG3Q9UGV2 375 aa4.62□□□□□ -1.67
PCF11-205ENST00000530906 PPP1R3CQ9UQK1 317 aa4.62□□□□□ -1.67
PCF11-205ENST00000530906 TP53TG5Q9Y2B4 290 aa4.62□□□□□ -1.67
PCF11-205ENST00000530906 HEATR1Q9H583 2144 aaKnown RBP4.61□□□□□ -1.67
PCF11-205ENST00000530906 ZNF292O60281 2723 aa4.61□□□□□ -1.67
PCF11-205ENST00000530906 FRYLO94915 3013 aa4.61□□□□□ -1.67
PCF11-205ENST00000530906 VPS13AQ96RL7 3174 aa4.61□□□□□ -1.67
PCF11-205ENST00000530906 TRAV38-1A0A0B4J264 116 aa4.61□□□□□ -1.67
PCF11-205ENST00000530906 A0A0G2JNJ9 132 aa4.61□□□□□ -1.67
PCF11-205ENST00000530906 A0A0G2JRQ6 117 aa4.61□□□□□ -1.67
PCF11-205ENST00000530906 KBTBD11-OT1A0A1B0GTJ5 212 aa4.61□□□□□ -1.67
PCF11-205ENST00000530906 SIGLEC5O15389 551 aa4.61□□□□□ -1.67
PCF11-205ENST00000530906 NDUFA2O43678 99 aa4.61□□□□□ -1.67
PCF11-205ENST00000530906 ZG16O60844 167 aa4.61□□□□□ -1.67
PCF11-205ENST00000530906 MPDU1O75352 247 aa4.61□□□□□ -1.67
PCF11-205ENST00000530906 TMEM50AO95807 157 aa4.61□□□□□ -1.67
PCF11-205ENST00000530906 IGHV1-46P01743 117 aa4.61□□□□□ -1.67
PCF11-205ENST00000530906 SFTA3P0C7M3 94 aa4.61□□□□□ -1.67
PCF11-205ENST00000530906 ZNF16P17020 682 aaPredicted RBP4.61□□□□□ -1.67
PCF11-205ENST00000530906 BMP5P22003 454 aa4.61□□□□□ -1.67
PCF11-205ENST00000530906 PPP1CCP36873 323 aaKnown RBP4.61□□□□□ -1.67
PCF11-205ENST00000530906 THBS3P49746 956 aa4.61□□□□□ -1.67
PCF11-205ENST00000530906 UBE2KP61086 200 aa4.61□□□□□ -1.67
PCF11-205ENST00000530906 ERVK-16P61578 105 aa4.61□□□□□ -1.67
PCF11-205ENST00000530906 BTN1A1Q13410 526 aa4.61□□□□□ -1.67
PCF11-205ENST00000530906 CLINT1Q14677 625 aa4.61□□□□□ -1.67
PCF11-205ENST00000530906 RHEBQ15382 184 aa4.61□□□□□ -1.67
PCF11-205ENST00000530906 GUK1Q16774 197 aa4.61□□□□□ -1.67
PCF11-205ENST00000530906 FBXL19-AS1Q494R0 122 aa4.61□□□□□ -1.67
PCF11-205ENST00000530906 MORN2Q502X0 79 aa4.61□□□□□ -1.67
PCF11-205ENST00000530906 DHRS7BQ6IAN0 325 aaPredicted RBP4.61□□□□□ -1.67
PCF11-205ENST00000530906 SLC25A24Q6NUK1 477 aa4.61□□□□□ -1.67
PCF11-205ENST00000530906 TMEM14EPQ6UXP3 125 aa4.61□□□□□ -1.67
PCF11-205ENST00000530906 ZNF788Q6ZQV5 615 aa4.61□□□□□ -1.67
PCF11-205ENST00000530906 MOGAT3Q86VF5 341 aa4.61□□□□□ -1.67
PCF11-205ENST00000530906 LILRB2Q8N423 598 aa4.61□□□□□ -1.67
PCF11-205ENST00000530906 ZNF525Q8N782 197 aa4.61□□□□□ -1.67
PCF11-205ENST00000530906 C8orf31Q8N9H6 132 aa4.61□□□□□ -1.67
PCF11-205ENST00000530906 Q8NA96 180 aa4.61□□□□□ -1.67
PCF11-205ENST00000530906 CLRN3Q8NCR9 226 aa4.61□□□□□ -1.67
PCF11-205ENST00000530906 OR52L2PQ8NGH6 319 aa4.61□□□□□ -1.67
PCF11-205ENST00000530906 OR4S2Q8NH73 311 aa4.61□□□□□ -1.67
PCF11-205ENST00000530906 FAM213BQ8TBF2 198 aa4.61□□□□□ -1.67
PCF11-205ENST00000530906 ITLN1Q8WWA0 313 aa4.61□□□□□ -1.67
PCF11-205ENST00000530906 RND1Q92730 232 aa4.61□□□□□ -1.67
PCF11-205ENST00000530906 TMEM147Q9BVK8 224 aa4.61□□□□□ -1.67
PCF11-205ENST00000530906 GGACTQ9BVM4 153 aa4.61□□□□□ -1.67
PCF11-205ENST00000530906 MAGT1Q9H0U3 335 aa4.61□□□□□ -1.67
PCF11-205ENST00000530906 SLC35B3Q9H1N7 401 aa4.61□□□□□ -1.67
PCF11-205ENST00000530906 GAL3ST2Q9H3Q3 398 aa4.61□□□□□ -1.67
PCF11-205ENST00000530906 TUBA4BQ9H853 241 aa4.61□□□□□ -1.67
PCF11-205ENST00000530906 KCNIP2Q9NS61 270 aa4.61□□□□□ -1.67
PCF11-205ENST00000530906 CALYQ9NYX4 217 aa4.61□□□□□ -1.67
PCF11-205ENST00000530906 CLN8Q9UBY8 286 aa4.61□□□□□ -1.67
PCF11-205ENST00000530906 Q9UFV3 132 aa4.61□□□□□ -1.67
PCF11-205ENST00000530906 TMA7Q9Y2S6 64 aaKnown RBP4.61□□□□□ -1.67
PCF11-205ENST00000530906 FBXO7Q9Y3I1 522 aa4.61□□□□□ -1.67
PCF11-205ENST00000530906 LINC00312Q9Y6C7 94 aa4.61□□□□□ -1.67
PCF11-205ENST00000530906 MUC6Q6W4X9 2439 aa4.61□□□□□ -1.67
PCF11-205ENST00000530906 GVINP1Q7Z2Y8 2422 aa4.61□□□□□ -1.67
PCF11-205ENST00000530906 URB1O60287 2271 aaKnown RBP4.6□□□□□ -1.67
PCF11-205ENST00000530906 RIF1Q5UIP0 2472 aaKnown RBP4.6□□□□□ -1.67
PCF11-205ENST00000530906 TRAV39A0A0B4J263 110 aa4.6□□□□□ -1.67
PCF11-205ENST00000530906 hADV38S2A0JD32 116 aa4.6□□□□□ -1.67
PCF11-205ENST00000530906 MARCH11A6NNE9 402 aa4.6□□□□□ -1.67
PCF11-205ENST00000530906 C17orf100A8MU93 164 aa4.6□□□□□ -1.67
PCF11-205ENST00000530906 FAM157AC9JC47 383 aa4.6□□□□□ -1.67
PCF11-205ENST00000530906 DNASE2O00115 360 aaPredicted RBP4.6□□□□□ -1.67
PCF11-205ENST00000530906 SPRY3O43610 288 aa4.6□□□□□ -1.67
PCF11-205ENST00000530906 SCO1O75880 301 aa4.6□□□□□ -1.67
PCF11-205ENST00000530906 CST7O76096 145 aa4.6□□□□□ -1.67
PCF11-205ENST00000530906 IFNA1P01562 189 aa4.6□□□□□ -1.67
PCF11-205ENST00000530906 HSPB1P04792 205 aaKnown RBP4.6□□□□□ -1.67
PCF11-205ENST00000530906 NQO2P16083 231 aa4.6□□□□□ -1.67
PCF11-205ENST00000530906 EGR1P18146 543 aa4.6□□□□□ -1.67
PCF11-205ENST00000530906 ADCYAP1P18509 176 aa4.6□□□□□ -1.67
PCF11-205ENST00000530906 OMGP23515 440 aa4.6□□□□□ -1.67
PCF11-205ENST00000530906 CCKARP32238 428 aa4.6□□□□□ -1.67
PCF11-205ENST00000530906 DUTP33316 252 aaKnown RBP4.6□□□□□ -1.67
PCF11-205ENST00000530906 CD80P33681 288 aa4.6□□□□□ -1.67
PCF11-205ENST00000530906 SSTR5P35346 364 aa4.6□□□□□ -1.67
PCF11-205ENST00000530906 CEBPDP49716 269 aaPredicted RBP4.6□□□□□ -1.67
PCF11-205ENST00000530906 ASCL1P50553 236 aa4.6□□□□□ -1.67
PCF11-205ENST00000530906 LOXL3P58215 753 aa4.6□□□□□ -1.67
PCF11-205ENST00000530906 SPCS3P61009 180 aa4.6□□□□□ -1.67
PCF11-205ENST00000530906 GNB2P62879 340 aa4.6□□□□□ -1.67
PCF11-205ENST00000530906 FAM27E3Q08E93 113 aa4.6□□□□□ -1.67
PCF11-205ENST00000530906 EDDM3AQ14507 147 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms