RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 NAT6Q93015 286 aa6.88□□□□□ -1.31
CSDE1-214ENST00000530886 LIN37Q96GY3 246 aaPredicted RBP6.88□□□□□ -1.31
CSDE1-214ENST00000530886 TMEM204Q9BSN7 226 aa6.88□□□□□ -1.31
CSDE1-214ENST00000530886 PNO1Q9NRX1 252 aaKnown RBP6.88□□□□□ -1.31
CSDE1-214ENST00000530886 NPIPA1Q9UND3 350 aa6.88□□□□□ -1.31
CSDE1-214ENST00000530886 KIAA1549Q9HCM3 1950 aa6.87□□□□□ -1.31
CSDE1-214ENST00000530886 TNRC6BQ9UPQ9 1833 aaKnown RBP6.87□□□□□ -1.31
CSDE1-214ENST00000530886 NDUFB4O95168 129 aa6.87□□□□□ -1.31
CSDE1-214ENST00000530886 GP1BBP13224 206 aa6.87□□□□□ -1.31
CSDE1-214ENST00000530886 GUCA1AP43080 201 aaPredicted RBP6.87□□□□□ -1.31
CSDE1-214ENST00000530886 FUT6P51993 359 aa6.87□□□□□ -1.31
CSDE1-214ENST00000530886 UBE2G1P62253 170 aa6.87□□□□□ -1.31
CSDE1-214ENST00000530886 SLC25A34Q6PIV7 304 aa6.87□□□□□ -1.31
CSDE1-214ENST00000530886 RERGQ96A58 199 aaPredicted RBP6.87□□□□□ -1.31
CSDE1-214ENST00000530886 NPVFQ9HCQ7 196 aa6.87□□□□□ -1.31
CSDE1-214ENST00000530886 SHANK1Q9Y566 2161 aa6.87□□□□□ -1.31
CSDE1-214ENST00000530886 EDDM13A0A1B0GTR0 161 aa6.87□□□□□ -1.31
CSDE1-214ENST00000530886 PTGDSP41222 190 aa6.87□□□□□ -1.31
CSDE1-214ENST00000530886 RAC3P60763 192 aa6.87□□□□□ -1.31
CSDE1-214ENST00000530886 SLC38A11Q08AI6 406 aa6.87□□□□□ -1.31
CSDE1-214ENST00000530886 MYBPHQ13203 477 aa6.87□□□□□ -1.31
CSDE1-214ENST00000530886 RAB30Q15771 203 aa6.87□□□□□ -1.31
CSDE1-214ENST00000530886 FIGLAQ6QHK4 219 aa6.87□□□□□ -1.31
CSDE1-214ENST00000530886 RASL11AQ6T310 242 aa6.87□□□□□ -1.31
CSDE1-214ENST00000530886 ST6GALNAC3Q8NDV1 305 aa6.87□□□□□ -1.31
CSDE1-214ENST00000530886 PMCHL2Q9BQD1 86 aa6.87□□□□□ -1.31
CSDE1-214ENST00000530886 SCRT2Q9NQ03 307 aa6.87□□□□□ -1.31
CSDE1-214ENST00000530886 SLC7A10Q9NS82 523 aa6.87□□□□□ -1.31
CSDE1-214ENST00000530886 ADAMTS20P59510 1910 aa6.87□□□□□ -1.31
CSDE1-214ENST00000530886 A0A0G2JRQ6 117 aa6.86□□□□□ -1.31
CSDE1-214ENST00000530886 H3BRM9 83 aa6.86□□□□□ -1.31
CSDE1-214ENST00000530886 BMPR1BO00238 502 aa6.86□□□□□ -1.31
CSDE1-214ENST00000530886 ZNF205O95201 554 aa6.86□□□□□ -1.31
CSDE1-214ENST00000530886 GOSR1O95249 250 aa6.86□□□□□ -1.31
CSDE1-214ENST00000530886 HAND1O96004 215 aa6.86□□□□□ -1.31
CSDE1-214ENST00000530886 SRFP11831 508 aa6.86□□□□□ -1.31
CSDE1-214ENST00000530886 RAB9AP51151 201 aa6.86□□□□□ -1.31
CSDE1-214ENST00000530886 EBLN2Q6P2I7 272 aa6.86□□□□□ -1.31
CSDE1-214ENST00000530886 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.86□□□□□ -1.317e-9■■■□□ 18.5
CSDE1-214ENST00000530886 MMD2Q8IY49 270 aa6.86□□□□□ -1.31
CSDE1-214ENST00000530886 GAPTQ8N292 157 aa6.86□□□□□ -1.31
CSDE1-214ENST00000530886 MS4A6AQ9H2W1 248 aa6.86□□□□□ -1.31
CSDE1-214ENST00000530886 PILRBQ9UKJ0 227 aa6.86□□□□□ -1.31
CSDE1-214ENST00000530886 WNT6Q9Y6F9 365 aa6.86□□□□□ -1.31
CSDE1-214ENST00000530886 V9GYV3 84 aa6.86□□□□□ -1.31
CSDE1-214ENST00000530886 C9orf118A6NHY6 69 aa6.86□□□□□ -1.31
CSDE1-214ENST00000530886 H3BP45 60 aa6.86□□□□□ -1.31
CSDE1-214ENST00000530886 CRYBA4P53673 196 aa6.86□□□□□ -1.31
CSDE1-214ENST00000530886 RELBQ01201 579 aa6.86□□□□□ -1.31
CSDE1-214ENST00000530886 PSG7Q13046 419 aa6.86□□□□□ -1.31
CSDE1-214ENST00000530886 ATOH7Q8N100 152 aa6.86□□□□□ -1.31
CSDE1-214ENST00000530886 OCC1Q8TAD7 63 aa6.86□□□□□ -1.31
CSDE1-214ENST00000530886 WIPF2Q8TF74 440 aaPredicted RBP6.86□□□□□ -1.31
CSDE1-214ENST00000530886 RDH5Q92781 318 aa6.86□□□□□ -1.31
CSDE1-214ENST00000530886 C11orf52Q96A22 123 aa6.86□□□□□ -1.31
CSDE1-214ENST00000530886 SPATA25Q9BR10 227 aa6.86□□□□□ -1.31
CSDE1-214ENST00000530886 DERL1Q9BUN8 251 aa6.86□□□□□ -1.31
CSDE1-214ENST00000530886 TMEM147Q9BVK8 224 aa6.86□□□□□ -1.31
CSDE1-214ENST00000530886 TBC1D29Q9UFV1 150 aa6.86□□□□□ -1.31
CSDE1-214ENST00000530886 ZNF835Q9Y2P0 537 aa6.86□□□□□ -1.31
CSDE1-214ENST00000530886 ARID1AO14497 2285 aa6.86□□□□□ -1.31
CSDE1-214ENST00000530886 UBE2L5PA0A1B0GUS4 154 aa6.86□□□□□ -1.31
CSDE1-214ENST00000530886 PSMB11A5LHX3 300 aa6.86□□□□□ -1.31
CSDE1-214ENST00000530886 AMY1AP04745 511 aa6.86□□□□□ -1.31
CSDE1-214ENST00000530886 S100GP29377 79 aa6.86□□□□□ -1.31
CSDE1-214ENST00000530886 NNATQ16517 81 aa6.86□□□□□ -1.31
CSDE1-214ENST00000530886 LCN12Q6JVE5 192 aa6.86□□□□□ -1.31
CSDE1-214ENST00000530886 ERASQ7Z444 233 aa6.86□□□□□ -1.31
CSDE1-214ENST00000530886 STXBP6Q8NFX7 210 aa6.86□□□□□ -1.31
CSDE1-214ENST00000530886 FER1L6-AS2Q96M78 137 aa6.86□□□□□ -1.31
CSDE1-214ENST00000530886 DGAT2Q96PD7 388 aa6.86□□□□□ -1.31
CSDE1-214ENST00000530886 NPFFR1Q9GZQ6 430 aa6.86□□□□□ -1.31
CSDE1-214ENST00000530886 C7orf71A4D174 169 aa6.85□□□□□ -1.31
CSDE1-214ENST00000530886 LRP5LA4QPB2 252 aa6.85□□□□□ -1.31
CSDE1-214ENST00000530886 FRG2CA6NGY1 282 aa6.85□□□□□ -1.31
CSDE1-214ENST00000530886 PDCD6O75340 191 aa6.85□□□□□ -1.31
CSDE1-214ENST00000530886 IL11P20809 199 aa6.85□□□□□ -1.31
CSDE1-214ENST00000530886 F2RP25116 425 aa6.85□□□□□ -1.31
CSDE1-214ENST00000530886 H1FNTQ75WM6 255 aaPredicted RBP6.85□□□□□ -1.31
CSDE1-214ENST00000530886 C18orf32Q8TCD1 76 aa6.85□□□□□ -1.31
CSDE1-214ENST00000530886 BMFQ96LC9 184 aa6.85□□□□□ -1.31
CSDE1-214ENST00000530886 PHPT1Q9NRX4 125 aaPredicted RBP6.85□□□□□ -1.31
CSDE1-214ENST00000530886 NAT8BQ9UHF3 227 aa6.85□□□□□ -1.31
CSDE1-214ENST00000530886 HS3ST3A1Q9Y663 406 aa6.85□□□□□ -1.31
CSDE1-214ENST00000530886 C5orf63A6NC05 138 aa6.85□□□□□ -1.31
CSDE1-214ENST00000530886 K7EN84 100 aa6.85□□□□□ -1.31
CSDE1-214ENST00000530886 PGLYRP1O75594 196 aaPredicted RBP6.85□□□□□ -1.31
CSDE1-214ENST00000530886 ATP5G3P48201 142 aa6.85□□□□□ -1.31
CSDE1-214ENST00000530886 ZNF776Q68DI1 518 aaPredicted RBP6.85□□□□□ -1.31
CSDE1-214ENST00000530886 SLC35E4Q6ICL7 350 aa6.85□□□□□ -1.31
CSDE1-214ENST00000530886 BAHD1Q8TBE0 780 aaPredicted RBP6.85□□□□□ -1.31
CSDE1-214ENST00000530886 ZNF391Q9UJN7 358 aa6.85□□□□□ -1.31
CSDE1-214ENST00000530886 FER1L5A0AVI2 2057 aa6.85□□□□□ -1.31
CSDE1-214ENST00000530886 GTF3C1Q12789 2109 aa6.85□□□□□ -1.31
CSDE1-214ENST00000530886 TRGV10A0A0A0MS01 117 aa6.85□□□□□ -1.31
CSDE1-214ENST00000530886 FAM231BA6NCW3 169 aa6.85□□□□□ -1.31
CSDE1-214ENST00000530886 TSPAN13O95857 204 aa6.85□□□□□ -1.31
CSDE1-214ENST00000530886 GPM6AP51674 278 aa6.85□□□□□ -1.31
CSDE1-214ENST00000530886 FOXL2P58012 376 aa6.85□□□□□ -1.31
CSDE1-214ENST00000530886 CCL7P80098 99 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms