RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 TUBD1Q9UJT1 453 aa7.28□□□□□ -1.24
CTNND1-227ENST00000530748 RALGAPA2Q2PPJ7 1873 aa7.28□□□□□ -1.24
CTNND1-227ENST00000530748 XIRP1Q702N8 1843 aaKnown RBP7.27□□□□□ -1.24
CTNND1-227ENST00000530748 IGHV1-69-2A0A0G2JMI3 117 aa7.27□□□□□ -1.25
CTNND1-227ENST00000530748 LOC390937A0A1W2PQ73 354 aa7.27□□□□□ -1.25
CTNND1-227ENST00000530748 A0A1W2PR77 199 aa7.27□□□□□ -1.25
CTNND1-227ENST00000530748 ODAMA1E959 279 aa7.27□□□□□ -1.25
CTNND1-227ENST00000530748 J3QW42 95 aa7.27□□□□□ -1.25
CTNND1-227ENST00000530748 OR2A4O95047 310 aa7.27□□□□□ -1.25
CTNND1-227ENST00000530748 PF4V1P10720 104 aa7.27□□□□□ -1.25
CTNND1-227ENST00000530748 RUNX1Q01196 453 aa7.27□□□□□ -1.25
CTNND1-227ENST00000530748 WDR25Q64LD2 544 aaPredicted RBP7.27□□□□□ -1.25
CTNND1-227ENST00000530748 OR2A7Q96R45 310 aa7.27□□□□□ -1.25
CTNND1-227ENST00000530748 A0A1W2PQM1 296 aa7.27□□□□□ -1.25
CTNND1-227ENST00000530748 CFDP00746 253 aaPredicted RBP7.27□□□□□ -1.25
CTNND1-227ENST00000530748 CTSBP07858 339 aa7.27□□□□□ -1.25
CTNND1-227ENST00000530748 MUC1P15941 1255 aaPredicted RBP7.27□□□□□ -1.25
CTNND1-227ENST00000530748 P2RY4P51582 365 aa7.27□□□□□ -1.25
CTNND1-227ENST00000530748 GUCA2BQ16661 112 aa7.27□□□□□ -1.25
CTNND1-227ENST00000530748 RIPPLY2Q5TAB7 128 aa7.27□□□□□ -1.25
CTNND1-227ENST00000530748 HCP5Q6MZN7 132 aa7.27□□□□□ -1.25
CTNND1-227ENST00000530748 OR52M1Q8NGK5 317 aa7.27□□□□□ -1.25
CTNND1-227ENST00000530748 ZCCHC14Q8WYQ9 949 aaKnown RBP7.27□□□□□ -1.25
CTNND1-227ENST00000530748 RSG1Q9BU20 258 aa7.27□□□□□ -1.25
CTNND1-227ENST00000530748 RELQ04864 619 aaPredicted RBP7.27□□□□□ -1.25
CTNND1-227ENST00000530748 UBE2V2Q15819 145 aa7.27□□□□□ -1.25
CTNND1-227ENST00000530748 ATP1A1-AS1Q5TC04 95 aa7.27□□□□□ -1.25
CTNND1-227ENST00000530748 LAMTOR1Q6IAA8 161 aa7.27□□□□□ -1.25
CTNND1-227ENST00000530748 TMEM252Q8N6L7 170 aa7.27□□□□□ -1.25
CTNND1-227ENST00000530748 CYB561D1Q8N8Q1 229 aa7.27□□□□□ -1.25
CTNND1-227ENST00000530748 CHRNA10Q9GZZ6 450 aa7.27□□□□□ -1.25
CTNND1-227ENST00000530748 DPH3P1Q9H4G8 78 aa7.27□□□□□ -1.25
CTNND1-227ENST00000530748 ZNF236Q9UL36 1845 aa7.27□□□□□ -1.25
CTNND1-227ENST00000530748 A0A087X0M5 115 aa7.27□□□□□ -1.25
CTNND1-227ENST00000530748 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.27□□□□□ -1.25
CTNND1-227ENST00000530748 A0A1B0GX30 115 aa7.27□□□□□ -1.25
CTNND1-227ENST00000530748 CD99P14209 185 aa7.27□□□□□ -1.25
CTNND1-227ENST00000530748 PTGDSP41222 190 aa7.27□□□□□ -1.25
CTNND1-227ENST00000530748 TFPI2P48307 235 aa7.27□□□□□ -1.25
CTNND1-227ENST00000530748 TMEM187Q14656 261 aa7.27□□□□□ -1.25
CTNND1-227ENST00000530748 FGFRL1Q8N441 504 aa7.27□□□□□ -1.25
CTNND1-227ENST00000530748 TAF15Q92804 592 aaKnown RBP eCLIP7.27□□□□□ -1.253e-8■■■□□ 14.9
CTNND1-227ENST00000530748 DUX5Q96PT3 197 aa7.27□□□□□ -1.25
CTNND1-227ENST00000530748 MRPL32Q9BYC8 188 aaKnown RBP7.27□□□□□ -1.25
CTNND1-227ENST00000530748 AURKAIP1Q9NWT8 199 aaPredicted RBP7.27□□□□□ -1.25
CTNND1-227ENST00000530748 HSPB7Q9UBY9 170 aa7.27□□□□□ -1.25
CTNND1-227ENST00000530748 MCM3APO60318 1980 aa7.27□□□□□ -1.25
CTNND1-227ENST00000530748 A8MWL6 223 aa7.26□□□□□ -1.25
CTNND1-227ENST00000530748 B9A039 149 aa7.26□□□□□ -1.25
CTNND1-227ENST00000530748 H3BVH4 76 aa7.26□□□□□ -1.25
CTNND1-227ENST00000530748 SLC25A38Q96DW6 304 aa7.26□□□□□ -1.25
CTNND1-227ENST00000530748 CLEC7AQ9BXN2 247 aa7.26□□□□□ -1.25
CTNND1-227ENST00000530748 TMEM56-RWDD3S4R434 201 aa7.26□□□□□ -1.25
CTNND1-227ENST00000530748 hCG_38984A0A1B0GV85 526 aa7.26□□□□□ -1.25
CTNND1-227ENST00000530748 A0A1W2PP11 408 aa7.26□□□□□ -1.25
CTNND1-227ENST00000530748 PRR19A6NJB7 356 aa7.26□□□□□ -1.25
CTNND1-227ENST00000530748 S1PR2O95136 353 aa7.26□□□□□ -1.25
CTNND1-227ENST00000530748 TNFRSF9Q07011 255 aa7.26□□□□□ -1.25
CTNND1-227ENST00000530748 FAM106AQ4KMX7 169 aa7.26□□□□□ -1.25
CTNND1-227ENST00000530748 C19orf54Q5BKX5 351 aa7.26□□□□□ -1.25
CTNND1-227ENST00000530748 CD200R1LQ6Q8B3 271 aa7.26□□□□□ -1.25
CTNND1-227ENST00000530748 OR9G1Q8NH87 305 aa7.26□□□□□ -1.25
CTNND1-227ENST00000530748 RAX2Q96IS3 184 aa7.26□□□□□ -1.25
CTNND1-227ENST00000530748 AQP10Q96PS8 301 aa7.26□□□□□ -1.25
CTNND1-227ENST00000530748 TLNRD1Q9H1K6 362 aa7.26□□□□□ -1.25
CTNND1-227ENST00000530748 NPIPB13A6NJU9 1138 aa7.26□□□□□ -1.25
CTNND1-227ENST00000530748 NPIPB4C9JG80 1138 aa7.26□□□□□ -1.25
CTNND1-227ENST00000530748 DIRC3C9JPN6 131 aa7.26□□□□□ -1.25
CTNND1-227ENST00000530748 M0R3E3 92 aa7.26□□□□□ -1.25
CTNND1-227ENST00000530748 KBTBD11O94819 623 aa7.26□□□□□ -1.25
CTNND1-227ENST00000530748 NDUFB4O95168 129 aa7.26□□□□□ -1.25
CTNND1-227ENST00000530748 SLC25A53Q5H9E4 307 aa7.26□□□□□ -1.25
CTNND1-227ENST00000530748 ZNF818PQ6ZRF7 136 aa7.26□□□□□ -1.25
CTNND1-227ENST00000530748 CHODLQ9H9P2 273 aa7.26□□□□□ -1.25
CTNND1-227ENST00000530748 SMCHD1A6NHR9 2005 aa7.26□□□□□ -1.25
CTNND1-227ENST00000530748 MT-ND6P03923 174 aa7.26□□□□□ -1.25
CTNND1-227ENST00000530748 ACAA1P09110 424 aaPredicted RBP7.26□□□□□ -1.25
CTNND1-227ENST00000530748 FCGR2BP31994 310 aaPredicted RBP7.26□□□□□ -1.25
CTNND1-227ENST00000530748 RAB9AP51151 201 aa7.26□□□□□ -1.25
CTNND1-227ENST00000530748 SUCLG1P53597 346 aaKnown RBP7.26□□□□□ -1.25
CTNND1-227ENST00000530748 RPS11P62280 158 aaKnown RBP eCLIP7.26□□□□□ -1.25
CTNND1-227ENST00000530748 HERPUD1Q15011 391 aa7.26□□□□□ -1.25
CTNND1-227ENST00000530748 MIC13Q5XKP0 118 aa7.26□□□□□ -1.25
CTNND1-227ENST00000530748 OR1N2Q8NGR9 330 aa7.26□□□□□ -1.25
CTNND1-227ENST00000530748 POM121Q96HA1 1249 aa7.26□□□□□ -1.25
CTNND1-227ENST00000530748 SMIM8Q96KF7 97 aa7.26□□□□□ -1.25
CTNND1-227ENST00000530748 QTRT1Q9BXR0 403 aaKnown RBP7.26□□□□□ -1.25
CTNND1-227ENST00000530748 TMEM74BQ9NUR3 256 aa7.26□□□□□ -1.25
CTNND1-227ENST00000530748 FOXD3Q9UJU5 478 aaPredicted RBP7.26□□□□□ -1.25
CTNND1-227ENST00000530748 PLXNA1Q9UIW2 1896 aa7.26□□□□□ -1.25
CTNND1-227ENST00000530748 UCP3P55916 312 aa7.26□□□□□ -1.25
CTNND1-227ENST00000530748 VN1R17PQ8TDU5 208 aa7.26□□□□□ -1.25
CTNND1-227ENST00000530748 RAB37Q96AX2 223 aa7.26□□□□□ -1.25
CTNND1-227ENST00000530748 OR51M1Q9H341 326 aa7.26□□□□□ -1.25
CTNND1-227ENST00000530748 LIPFP07098 398 aa7.25□□□□□ -1.25
CTNND1-227ENST00000530748 BTF3P20290 206 aaKnown RBP7.25□□□□□ -1.25
CTNND1-227ENST00000530748 CSRP3P50461 194 aa7.25□□□□□ -1.25
CTNND1-227ENST00000530748 HSPE1P61604 102 aaKnown RBP7.25□□□□□ -1.25
CTNND1-227ENST00000530748 TBX15Q96SF7 602 aa7.25□□□□□ -1.25
CTNND1-227ENST00000530748 C19orf24Q9BVV8 132 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms