RNA–Protein interactions for RNA: ENST00000530516.1

NUP98-218, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 391 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-218ENST00000530516 LIMS4P0CW20 117 aa0.34□□□□□ -2.36
NUP98-218ENST00000530516 CCL2P13500 99 aa0.34□□□□□ -2.36
NUP98-218ENST00000530516 CFL1P23528 166 aaKnown RBP0.34□□□□□ -2.36
NUP98-218ENST00000530516 AGTR1P30556 359 aa0.34□□□□□ -2.36
NUP98-218ENST00000530516 ALDH3A1P30838 453 aa0.34□□□□□ -2.36
NUP98-218ENST00000530516 OR10J1P30954 320 aa0.34□□□□□ -2.36
NUP98-218ENST00000530516 HSPA9P38646 679 aaKnown RBP0.34□□□□□ -2.36
NUP98-218ENST00000530516 KCNJ3P48549 501 aa0.34□□□□□ -2.36
NUP98-218ENST00000530516 RBM11P57052 281 aaKnown RBP0.34□□□□□ -2.36
NUP98-218ENST00000530516 CARD18P57730 90 aa0.34□□□□□ -2.36
NUP98-218ENST00000530516 XIAPP98170 497 aa0.34□□□□□ -2.36
NUP98-218ENST00000530516 GNA12Q03113 381 aa0.34□□□□□ -2.36
NUP98-218ENST00000530516 NPATQ14207 1427 aa0.34□□□□□ -2.36
NUP98-218ENST00000530516 TMEM31Q5JXX7 168 aa0.34□□□□□ -2.36
NUP98-218ENST00000530516 LYZL1Q6UWQ5 148 aa0.34□□□□□ -2.36
NUP98-218ENST00000530516 MBD3L1Q8WWY6 194 aa0.34□□□□□ -2.36
NUP98-218ENST00000530516 SLC7A6Q92536 515 aa0.34□□□□□ -2.36
NUP98-218ENST00000530516 LRRC39Q96DD0 335 aa0.34□□□□□ -2.36
NUP98-218ENST00000530516 SMIM12Q96EX1 92 aa0.34□□□□□ -2.36
NUP98-218ENST00000530516 CPNE2Q96FN4 548 aaPredicted RBP0.34□□□□□ -2.36
NUP98-218ENST00000530516 Q96M85 177 aa0.34□□□□□ -2.36
NUP98-218ENST00000530516 OR7D2Q96RA2 312 aa0.34□□□□□ -2.36
NUP98-218ENST00000530516 PRRG3Q9BZD7 231 aa0.34□□□□□ -2.36
NUP98-218ENST00000530516 TMEM222Q9H0R3 208 aa0.34□□□□□ -2.36
NUP98-218ENST00000530516 MRM2Q9UI43 246 aaKnown RBP0.34□□□□□ -2.36
NUP98-218ENST00000530516 SBDSQ9Y3A5 250 aaKnown RBP eCLIP0.34□□□□□ -2.36
NUP98-218ENST00000530516 DIDO1Q9BTC0 2240 aaKnown RBP0.34□□□□□ -2.36
NUP98-218ENST00000530516 CCDC88AQ3V6T2 1871 aa0.33□□□□□ -2.36
NUP98-218ENST00000530516 SULT1C2O00338 296 aa0.33□□□□□ -2.36
NUP98-218ENST00000530516 TXNDC9O14530 226 aa0.33□□□□□ -2.36
NUP98-218ENST00000530516 PLA2G10O15496 165 aa0.33□□□□□ -2.36
NUP98-218ENST00000530516 ZNF737O75373 536 aa0.33□□□□□ -2.36
NUP98-218ENST00000530516 HBZP02008 142 aa0.33□□□□□ -2.36
NUP98-218ENST00000530516 APOA1P02647 267 aa0.33□□□□□ -2.36
NUP98-218ENST00000530516 CRPP02741 224 aa0.33□□□□□ -2.36
NUP98-218ENST00000530516 SERPINA7P05543 415 aa0.33□□□□□ -2.36
NUP98-218ENST00000530516 IVLP07476 585 aa0.33□□□□□ -2.36
NUP98-218ENST00000530516 PSMB8P28062 276 aa0.33□□□□□ -2.36
NUP98-218ENST00000530516 CA7P43166 264 aa0.33□□□□□ -2.36
NUP98-218ENST00000530516 RPL27AP46776 148 aaKnown RBP0.33□□□□□ -2.36
NUP98-218ENST00000530516 EVX1P49640 407 aa0.33□□□□□ -2.36
NUP98-218ENST00000530516 DAPP51397 102 aa0.33□□□□□ -2.36
NUP98-218ENST00000530516 RAB8AP61006 207 aa0.33□□□□□ -2.36
NUP98-218ENST00000530516 DAD1P61803 113 aa0.33□□□□□ -2.36
NUP98-218ENST00000530516 STX3Q13277 289 aa0.33□□□□□ -2.36
NUP98-218ENST00000530516 CLEC12BQ2HXU8 276 aa0.33□□□□□ -2.36
NUP98-218ENST00000530516 TMEM155Q4W5P6 130 aa0.33□□□□□ -2.36
NUP98-218ENST00000530516 FBXO48Q5FWF7 155 aa0.33□□□□□ -2.36
NUP98-218ENST00000530516 DRAM2Q6UX65 266 aa0.33□□□□□ -2.36
NUP98-218ENST00000530516 FP248Q71RG6 208 aaPredicted RBP0.33□□□□□ -2.36
NUP98-218ENST00000530516 KTN1-AS1Q86SY8 53 aa0.33□□□□□ -2.36
NUP98-218ENST00000530516 RPS4Y2Q8TD47 263 aa0.33□□□□□ -2.36
NUP98-218ENST00000530516 TLCD1Q96CP7 247 aa0.33□□□□□ -2.36
NUP98-218ENST00000530516 MS4A6EQ96DS6 147 aa0.33□□□□□ -2.36
NUP98-218ENST00000530516 SERPINB11Q96P15 392 aa0.33□□□□□ -2.36
NUP98-218ENST00000530516 OR51B6Q9H340 312 aa0.33□□□□□ -2.36
NUP98-218ENST00000530516 SLC2A9Q9NRM0 540 aa0.33□□□□□ -2.36
NUP98-218ENST00000530516 TAAR3PQ9P1P4 343 aa0.33□□□□□ -2.36
NUP98-218ENST00000530516 KLK5Q9Y337 293 aaPredicted RBP0.33□□□□□ -2.36
NUP98-218ENST00000530516 CACNA1BQ00975 2339 aa0.33□□□□□ -2.36
NUP98-218ENST00000530516 LAMA4Q16363 1823 aa0.33□□□□□ -2.36
NUP98-218ENST00000530516 MAP3K19Q56UN5 1328 aa0.33□□□□□ -2.36
NUP98-218ENST00000530516 GLI3P10071 1580 aa0.32□□□□□ -2.36
NUP98-218ENST00000530516 ALPK2Q86TB3 2170 aa0.32□□□□□ -2.36
NUP98-218ENST00000530516 TRAV8-1A0A0A6YYK1 113 aa0.32□□□□□ -2.36
NUP98-218ENST00000530516 MDFIC2A0A1B0GVS7 189 aa0.32□□□□□ -2.36
NUP98-218ENST00000530516 HMSDA8MTL9 139 aa0.32□□□□□ -2.36
NUP98-218ENST00000530516 KLRC4O43908 158 aa0.32□□□□□ -2.36
NUP98-218ENST00000530516 ARL6IP5O75915 188 aa0.32□□□□□ -2.36
NUP98-218ENST00000530516 CIAO1O76071 339 aa0.32□□□□□ -2.36
NUP98-218ENST00000530516 TNFAIP8O95379 198 aa0.32□□□□□ -2.36
NUP98-218ENST00000530516 RPSAP08865 295 aaKnown RBP0.32□□□□□ -2.36
NUP98-218ENST00000530516 IFNGR2P38484 337 aa0.32□□□□□ -2.36
NUP98-218ENST00000530516 GABRA2P47869 451 aa0.32□□□□□ -2.36
NUP98-218ENST00000530516 DLX6P56179 175 aa0.32□□□□□ -2.36
NUP98-218ENST00000530516 H2BFSP57053 126 aa0.32□□□□□ -2.36
NUP98-218ENST00000530516 AP1S1P61966 158 aa0.32□□□□□ -2.36
NUP98-218ENST00000530516 HERVK_113P63121 156 aa0.32□□□□□ -2.36
NUP98-218ENST00000530516 HOXC5Q00444 222 aa0.32□□□□□ -2.36
NUP98-218ENST00000530516 ELOBQ15370 118 aa0.32□□□□□ -2.36
NUP98-218ENST00000530516 SYCP1Q15431 976 aa0.32□□□□□ -2.36
NUP98-218ENST00000530516 SLC36A2Q495M3 483 aa0.32□□□□□ -2.36
NUP98-218ENST00000530516 RBM48Q5RL73 367 aaKnown RBP0.32□□□□□ -2.36
NUP98-218ENST00000530516 LFNGQ8NES3 379 aa0.32□□□□□ -2.36
NUP98-218ENST00000530516 OR52E4Q8NGH9 312 aa0.32□□□□□ -2.36
NUP98-218ENST00000530516 DYNC2LI1Q8TCX1 351 aa0.32□□□□□ -2.36
NUP98-218ENST00000530516 CYGBQ8WWM9 190 aa0.32□□□□□ -2.36
NUP98-218ENST00000530516 TMEM56Q96MV1 263 aa0.32□□□□□ -2.36
NUP98-218ENST00000530516 ADAT1Q9BUB4 502 aaKnown RBP0.32□□□□□ -2.36
NUP98-218ENST00000530516 VCX3BQ9H321 246 aa0.32□□□□□ -2.36
NUP98-218ENST00000530516 EMC3Q9P0I2 261 aa0.32□□□□□ -2.36
NUP98-218ENST00000530516 CUL9Q8IWT3 2517 aa0.32□□□□□ -2.36
NUP98-218ENST00000530516 EML6Q6ZMW3 1958 aa0.32□□□□□ -2.36
NUP98-218ENST00000530516 MAST2Q6P0Q8 1798 aa0.32□□□□□ -2.36
NUP98-218ENST00000530516 EIF4G1Q04637 1599 aaKnown RBP0.32□□□□□ -2.36
NUP98-218ENST00000530516 LRPPRCP42704 1394 aaKnown RBP0.32□□□□□ -2.36
NUP98-218ENST00000530516 NCOA6Q14686 2063 aaPredicted RBP0.31□□□□□ -2.36
NUP98-218ENST00000530516 NUP160Q12769 1436 aa0.31□□□□□ -2.36
NUP98-218ENST00000530516 MUC5ACP98088 5654 aa0.31□□□□□ -2.36
NUP98-218ENST00000530516 IGKV1-9A0A0C4DH69 117 aa0.31□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms