RNA–Protein interactions for RNA: ENST00000529828.5

PTPRC-213, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 2,336 nt, Biotype non stop decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-213ENST00000529828 OR4E1P0C645 316 aa2.67□□□□□ -1.98
PTPRC-213ENST00000529828 OR2T7P0C7T2 308 aa2.67□□□□□ -1.98
PTPRC-213ENST00000529828 DBTP11182 482 aaKnown RBP2.67□□□□□ -1.98
PTPRC-213ENST00000529828 EDN2P20800 178 aa2.67□□□□□ -1.98
PTPRC-213ENST00000529828 SERPINA2P20848 420 aa2.67□□□□□ -1.98
PTPRC-213ENST00000529828 PPP1CCP36873 323 aaKnown RBP2.67□□□□□ -1.98
PTPRC-213ENST00000529828 SOX2P48431 317 aa2.67□□□□□ -1.98
PTPRC-213ENST00000529828 CCR9P51686 369 aa2.67□□□□□ -1.98
PTPRC-213ENST00000529828 ZNF137PP52743 207 aa2.67□□□□□ -1.98
PTPRC-213ENST00000529828 AP2S1P53680 142 aaPredicted RBP2.67□□□□□ -1.98
PTPRC-213ENST00000529828 RAB40BQ12829 278 aa2.67□□□□□ -1.98
PTPRC-213ENST00000529828 PLAC9Q5JTB6 97 aa2.67□□□□□ -1.98
PTPRC-213ENST00000529828 SYT6Q5T7P8 510 aaPredicted RBP2.67□□□□□ -1.98
PTPRC-213ENST00000529828 C12orf73Q69YU5 71 aa2.67□□□□□ -1.98
PTPRC-213ENST00000529828 ETFRF1Q6IPR1 90 aa2.67□□□□□ -1.98
PTPRC-213ENST00000529828 FAHD1Q6P587 224 aa2.67□□□□□ -1.98
PTPRC-213ENST00000529828 GLDNQ6ZMI3 551 aaPredicted RBP2.67□□□□□ -1.98
PTPRC-213ENST00000529828 LINC00322Q6ZN03 302 aaPredicted RBP2.67□□□□□ -1.98
PTPRC-213ENST00000529828 GRPEL2Q8TAA5 225 aa2.67□□□□□ -1.98
PTPRC-213ENST00000529828 CD300LFQ8TDQ1 290 aa2.67□□□□□ -1.98
PTPRC-213ENST00000529828 TSEN15Q8WW01 171 aaKnown RBP2.67□□□□□ -1.98
PTPRC-213ENST00000529828 RGP1Q92546 391 aaPredicted RBP2.67□□□□□ -1.98
PTPRC-213ENST00000529828 MUL1Q969V5 352 aa2.67□□□□□ -1.98
PTPRC-213ENST00000529828 NEURL2Q9BR09 285 aa2.67□□□□□ -1.98
PTPRC-213ENST00000529828 KRTAP9-3Q9BYQ3 159 aa2.67□□□□□ -1.98
PTPRC-213ENST00000529828 PRRG3Q9BZD7 231 aa2.67□□□□□ -1.98
PTPRC-213ENST00000529828 SMPD3Q9NY59 655 aaPredicted RBP2.67□□□□□ -1.98
PTPRC-213ENST00000529828 TAS2R4Q9NYW5 299 aa2.67□□□□□ -1.98
PTPRC-213ENST00000529828 TRAPPC2LQ9UL33 140 aa2.67□□□□□ -1.98
PTPRC-213ENST00000529828 ING4Q9UNL4 249 aa2.67□□□□□ -1.98
PTPRC-213ENST00000529828 DIMT1Q9UNQ2 313 aaKnown RBP2.67□□□□□ -1.98
PTPRC-213ENST00000529828 GMPPBQ9Y5P6 360 aa2.67□□□□□ -1.98
PTPRC-213ENST00000529828 PUS1Q9Y606 427 aaKnown RBP eCLIP2.67□□□□□ -1.98
PTPRC-213ENST00000529828 A0A0B4J293 547 aa2.66□□□□□ -1.98
PTPRC-213ENST00000529828 A0A0J9YWU9 116 aa2.66□□□□□ -1.98
PTPRC-213ENST00000529828 C13orf42A0A1B0GVH6 325 aa2.66□□□□□ -1.98
PTPRC-213ENST00000529828 OR4C45A6NMZ5 311 aa2.66□□□□□ -1.98
PTPRC-213ENST00000529828 ZAR1LA6NP61 321 aa2.66□□□□□ -1.98
PTPRC-213ENST00000529828 F8W036 122 aa2.66□□□□□ -1.98
PTPRC-213ENST00000529828 J3QLW9 94 aa2.66□□□□□ -1.98
PTPRC-213ENST00000529828 SPINT2O43291 252 aa2.66□□□□□ -1.98
PTPRC-213ENST00000529828 LANCL1O43813 399 aa2.66□□□□□ -1.98
PTPRC-213ENST00000529828 FKBP6O75344 327 aa2.66□□□□□ -1.98
PTPRC-213ENST00000529828 NDUFA3O95167 84 aa2.66□□□□□ -1.98
PTPRC-213ENST00000529828 CNIH1O95406 144 aa2.66□□□□□ -1.98
PTPRC-213ENST00000529828 DIRAS3O95661 229 aa2.66□□□□□ -1.98
PTPRC-213ENST00000529828 ATP6V1G2O95670 118 aa2.66□□□□□ -1.98
PTPRC-213ENST00000529828 CA2P00918 260 aa2.66□□□□□ -1.98
PTPRC-213ENST00000529828 MT-ND4P03905 459 aa2.66□□□□□ -1.98
PTPRC-213ENST00000529828 FABP1P07148 127 aa2.66□□□□□ -1.98
PTPRC-213ENST00000529828 CSN3P07498 182 aa2.66□□□□□ -1.98
PTPRC-213ENST00000529828 GNAO1P09471 354 aa2.66□□□□□ -1.98
PTPRC-213ENST00000529828 APELAP0DMC3 54 aa2.66□□□□□ -1.98
PTPRC-213ENST00000529828 ZNF19P17023 458 aa2.66□□□□□ -1.98
PTPRC-213ENST00000529828 RCC1P18754 421 aaPredicted RBP2.66□□□□□ -1.98
PTPRC-213ENST00000529828 GZMHP20718 246 aa2.66□□□□□ -1.98
PTPRC-213ENST00000529828 KCNJ3P48549 501 aa2.66□□□□□ -1.98
PTPRC-213ENST00000529828 HOXA1P49639 335 aaPredicted RBP2.66□□□□□ -1.98
PTPRC-213ENST00000529828 ATP5IP56385 69 aaPredicted RBP2.66□□□□□ -1.98
PTPRC-213ENST00000529828 RBM11P57052 281 aaKnown RBP2.66□□□□□ -1.98
PTPRC-213ENST00000529828 EFNB1P98172 346 aa2.66□□□□□ -1.98
PTPRC-213ENST00000529828 KLF5Q13887 457 aaPredicted RBP2.66□□□□□ -1.98
PTPRC-213ENST00000529828 GUCA2BQ16661 112 aa2.66□□□□□ -1.98
PTPRC-213ENST00000529828 CD300EQ496F6 205 aaPredicted RBP2.66□□□□□ -1.98
PTPRC-213ENST00000529828 LBHQ53QV2 105 aaPredicted RBP2.66□□□□□ -1.98
PTPRC-213ENST00000529828 ELP2Q6IA86 826 aa2.66□□□□□ -1.98
PTPRC-213ENST00000529828 LCN12Q6JVE5 192 aa2.66□□□□□ -1.98
PTPRC-213ENST00000529828 PYHIN1Q6K0P9 492 aa2.66□□□□□ -1.98
PTPRC-213ENST00000529828 TRAT1Q6PIZ9 186 aa2.66□□□□□ -1.98
PTPRC-213ENST00000529828 ZNF497Q6ZNH5 498 aa2.66□□□□□ -1.98
PTPRC-213ENST00000529828 ODF3L1Q8IXM7 274 aa2.66□□□□□ -1.98
PTPRC-213ENST00000529828 Q8N402 240 aa2.66□□□□□ -1.98
PTPRC-213ENST00000529828 C8orf31Q8N9H6 132 aa2.66□□□□□ -1.98
PTPRC-213ENST00000529828 ORAI1Q96D31 301 aa2.66□□□□□ -1.98
PTPRC-213ENST00000529828 ABHD14AQ9BUJ0 271 aa2.66□□□□□ -1.98
PTPRC-213ENST00000529828 PARP12Q9H0J9 701 aaKnown RBP2.66□□□□□ -1.98
PTPRC-213ENST00000529828 CST11Q9H112 138 aa2.66□□□□□ -1.98
PTPRC-213ENST00000529828 RHOFQ9HBH0 211 aa2.66□□□□□ -1.98
PTPRC-213ENST00000529828 RANGRFQ9HD47 186 aaPredicted RBP2.66□□□□□ -1.98
PTPRC-213ENST00000529828 SIGLEC8Q9NYZ4 499 aa2.66□□□□□ -1.98
PTPRC-213ENST00000529828 WARS2Q9UGM6 360 aaKnown RBP2.66□□□□□ -1.98
PTPRC-213ENST00000529828 DHDHQ9UQ10 334 aa2.66□□□□□ -1.98
PTPRC-213ENST00000529828 NUBP2Q9Y5Y2 271 aa2.66□□□□□ -1.98
PTPRC-213ENST00000529828 SAA2-SAA4A0A096LPE2 208 aa2.65□□□□□ -1.98
PTPRC-213ENST00000529828 HMX3A6NHT5 357 aa2.65□□□□□ -1.98
PTPRC-213ENST00000529828 OR11H12B2RN74 326 aa2.65□□□□□ -1.98
PTPRC-213ENST00000529828 RRHO14718 337 aa2.65□□□□□ -1.98
PTPRC-213ENST00000529828 SLC16A6O15403 523 aa2.65□□□□□ -1.98
PTPRC-213ENST00000529828 ORC5O43913 435 aa2.65□□□□□ -1.98
PTPRC-213ENST00000529828 CCNKO75909 580 aa2.65□□□□□ -1.98
PTPRC-213ENST00000529828 ISG15P05161 165 aa2.65□□□□□ -1.98
PTPRC-213ENST00000529828 CRYGCP07315 174 aa2.65□□□□□ -1.98
PTPRC-213ENST00000529828 SAA2P0DJI9 122 aaPredicted RBP2.65□□□□□ -1.98
PTPRC-213ENST00000529828 RAB3AP20336 220 aa2.65□□□□□ -1.98
PTPRC-213ENST00000529828 ZP3P21754 424 aa2.65□□□□□ -1.98
PTPRC-213ENST00000529828 POLR2IP36954 125 aaKnown RBP2.65□□□□□ -1.98
PTPRC-213ENST00000529828 CRIP2P52943 208 aaPredicted RBP2.65□□□□□ -1.98
PTPRC-213ENST00000529828 CEBPGP53567 150 aa2.65□□□□□ -1.98
PTPRC-213ENST00000529828 PAX5Q02548 391 aa2.65□□□□□ -1.98
PTPRC-213ENST00000529828 ALKBH1Q13686 389 aaKnown RBP2.65□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms