RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 Q96M66 194 aa6.78□□□□□ -1.32
VPS11-203ENST00000529545 OR14A2Q96R54 314 aa6.78□□□□□ -1.32
VPS11-203ENST00000529545 PHB2Q99623 299 aa6.78□□□□□ -1.32
VPS11-203ENST00000529545 GGTLC1Q9BX51 225 aa6.78□□□□□ -1.32
VPS11-203ENST00000529545 TECRQ9NZ01 308 aaKnown RBP6.78□□□□□ -1.32
VPS11-203ENST00000529545 ZNF221Q9UK13 617 aa6.78□□□□□ -1.32
VPS11-203ENST00000529545 H3BNX3 289 aa6.77□□□□□ -1.33
VPS11-203ENST00000529545 TUSC2O75896 110 aa6.77□□□□□ -1.33
VPS11-203ENST00000529545 ALPLP05186 524 aa6.77□□□□□ -1.33
VPS11-203ENST00000529545 LIMS3P0CW19 117 aa6.77□□□□□ -1.33
VPS11-203ENST00000529545 LIMS4P0CW20 117 aa6.77□□□□□ -1.33
VPS11-203ENST00000529545 ZBTB25P24278 435 aa6.77□□□□□ -1.33
VPS11-203ENST00000529545 CEACAM6P40199 344 aa6.77□□□□□ -1.33
VPS11-203ENST00000529545 CBX3Q13185 183 aa6.77□□□□□ -1.33
VPS11-203ENST00000529545 DEFB114Q30KQ6 69 aa6.77□□□□□ -1.33
VPS11-203ENST00000529545 YIF1BQ5BJH7 314 aa6.77□□□□□ -1.33
VPS11-203ENST00000529545 XAF1Q6GPH4 301 aa6.77□□□□□ -1.33
VPS11-203ENST00000529545 SIGIRRQ6IA17 410 aa6.77□□□□□ -1.33
VPS11-203ENST00000529545 MOB1BQ7L9L4 216 aa6.77□□□□□ -1.33
VPS11-203ENST00000529545 RPP25LQ8N5L8 163 aaKnown RBP6.77□□□□□ -1.33
VPS11-203ENST00000529545 DRAXINQ8NBI3 349 aaPredicted RBP6.77□□□□□ -1.33
VPS11-203ENST00000529545 FAM46BQ96A09 425 aa6.77□□□□□ -1.33
VPS11-203ENST00000529545 SLC7A6OSQ96CW6 309 aaPredicted RBP6.77□□□□□ -1.33
VPS11-203ENST00000529545 SMIM19Q96E16 107 aa6.77□□□□□ -1.33
VPS11-203ENST00000529545 SULT4A1Q9BR01 284 aa6.77□□□□□ -1.33
VPS11-203ENST00000529545 OVOL2Q9BRP0 275 aa6.77□□□□□ -1.33
VPS11-203ENST00000529545 WFDC10AQ9H1F0 79 aa6.77□□□□□ -1.33
VPS11-203ENST00000529545 GHRLQ9UBU3 117 aa6.77□□□□□ -1.33
VPS11-203ENST00000529545 TRAV8-7A0A075B6U6 113 aa6.76□□□□□ -1.33
VPS11-203ENST00000529545 LOC102724200A0A096LPH7 203 aaPredicted RBP6.76□□□□□ -1.33
VPS11-203ENST00000529545 TRBV5-5A0A0J9YX44 114 aa6.76□□□□□ -1.33
VPS11-203ENST00000529545 A0A1W2PPK0 400 aa6.76□□□□□ -1.33
VPS11-203ENST00000529545 FAM223BA6NKX1 122 aa6.76□□□□□ -1.33
VPS11-203ENST00000529545 MPPED1O15442 326 aa6.76□□□□□ -1.33
VPS11-203ENST00000529545 OGG1O15527 345 aa6.76□□□□□ -1.33
VPS11-203ENST00000529545 IGKV1-16P04430 117 aa6.76□□□□□ -1.33
VPS11-203ENST00000529545 GABRB1P18505 474 aa6.76□□□□□ -1.33
VPS11-203ENST00000529545 KIR2DS2P43631 304 aa6.76□□□□□ -1.33
VPS11-203ENST00000529545 MAP2K4P45985 399 aa6.76□□□□□ -1.33
VPS11-203ENST00000529545 DEFA5Q01523 94 aa6.76□□□□□ -1.33
VPS11-203ENST00000529545 ATP5G2Q06055 141 aa6.76□□□□□ -1.33
VPS11-203ENST00000529545 ANKRD55Q3KP44 614 aa6.76□□□□□ -1.33
VPS11-203ENST00000529545 FAM209BQ5JX69 171 aa6.76□□□□□ -1.33
VPS11-203ENST00000529545 FAM223AQ8IWN6 122 aa6.76□□□□□ -1.33
VPS11-203ENST00000529545 NKAIN3Q8N8D7 197 aa6.76□□□□□ -1.33
VPS11-203ENST00000529545 OR52B4Q8NGK2 314 aa6.76□□□□□ -1.33
VPS11-203ENST00000529545 OR13C5Q8NGS8 318 aa6.76□□□□□ -1.33
VPS11-203ENST00000529545 RHOXF1Q8NHV9 184 aa6.76□□□□□ -1.33
VPS11-203ENST00000529545 AGMATQ9BSE5 352 aa6.76□□□□□ -1.33
VPS11-203ENST00000529545 FAAP24Q9BTP7 215 aa6.76□□□□□ -1.33
VPS11-203ENST00000529545 PARP12Q9H0J9 701 aaKnown RBP6.76□□□□□ -1.33
VPS11-203ENST00000529545 C11orf54Q9H0W9 315 aaPredicted RBP6.76□□□□□ -1.33
VPS11-203ENST00000529545 RIMS4Q9H426 269 aaPredicted RBP6.76□□□□□ -1.33
VPS11-203ENST00000529545 SLC35D1Q9NTN3 355 aa6.76□□□□□ -1.33
VPS11-203ENST00000529545 MRPS18AQ9NVS2 196 aaKnown RBP6.76□□□□□ -1.33
VPS11-203ENST00000529545 BABAM2Q9NXR7 383 aa6.76□□□□□ -1.33
VPS11-203ENST00000529545 MGAT4AQ9UM21 535 aa6.76□□□□□ -1.33
VPS11-203ENST00000529545 PCLOQ9Y6V0 5065 aa6.75□□□□□ -1.33
VPS11-203ENST00000529545 A0A0J9YWU9 116 aa6.75□□□□□ -1.33
VPS11-203ENST00000529545 MSGN1A6NI15 193 aa6.75□□□□□ -1.33
VPS11-203ENST00000529545 BMPR1BO00238 502 aa6.75□□□□□ -1.33
VPS11-203ENST00000529545 EI24O14681 340 aa6.75□□□□□ -1.33
VPS11-203ENST00000529545 OR9G9P0C7N8 305 aa6.75□□□□□ -1.33
VPS11-203ENST00000529545 UBBP0CG47 229 aa6.75□□□□□ -1.33
VPS11-203ENST00000529545 APELAP0DMC3 54 aa6.75□□□□□ -1.33
VPS11-203ENST00000529545 FOLR2P14207 255 aa6.75□□□□□ -1.33
VPS11-203ENST00000529545 MYL12AP19105 171 aa6.75□□□□□ -1.33
VPS11-203ENST00000529545 DCKP27707 260 aa6.75□□□□□ -1.33
VPS11-203ENST00000529545 BMI1P35226 326 aa6.75□□□□□ -1.33
VPS11-203ENST00000529545 ETV1P50549 477 aa6.75□□□□□ -1.33
VPS11-203ENST00000529545 RHOGP84095 191 aa6.75□□□□□ -1.33
VPS11-203ENST00000529545 TNFRSF9Q07011 255 aa6.75□□□□□ -1.33
VPS11-203ENST00000529545 PJVKQ0ZLH3 352 aa6.75□□□□□ -1.33
VPS11-203ENST00000529545 MED21Q13503 144 aa6.75□□□□□ -1.33
VPS11-203ENST00000529545 EXOSC2Q13868 293 aaKnown RBP6.75□□□□□ -1.33
VPS11-203ENST00000529545 LCE3BQ5TA77 95 aa6.75□□□□□ -1.33
VPS11-203ENST00000529545 OR2G6Q5TZ20 316 aa6.75□□□□□ -1.33
VPS11-203ENST00000529545 LGALS9CQ6DKI2 356 aa6.75□□□□□ -1.33
VPS11-203ENST00000529545 C6orf201Q7Z4U5 140 aa6.75□□□□□ -1.33
VPS11-203ENST00000529545 LYG2Q86SG7 212 aa6.75□□□□□ -1.33
VPS11-203ENST00000529545 TMEM217Q8N7C4 229 aa6.75□□□□□ -1.33
VPS11-203ENST00000529545 ZNF383Q8NA42 475 aa6.75□□□□□ -1.33
VPS11-203ENST00000529545 GATAD1Q8WUU5 269 aa6.75□□□□□ -1.33
VPS11-203ENST00000529545 UQCC2Q9BRT2 126 aa6.75□□□□□ -1.33
VPS11-203ENST00000529545 FGF20Q9NP95 211 aaPredicted RBP6.75□□□□□ -1.33
VPS11-203ENST00000529545 ZC4H2Q9NQZ6 224 aa6.75□□□□□ -1.33
VPS11-203ENST00000529545 EXOSC1Q9Y3B2 195 aaKnown RBP6.75□□□□□ -1.33
VPS11-203ENST00000529545 IRGMA1A4Y4 181 aa6.74□□□□□ -1.33
VPS11-203ENST00000529545 C2orf70A6NJV1 201 aa6.74□□□□□ -1.33
VPS11-203ENST00000529545 M0R1X1 148 aa6.74□□□□□ -1.33
VPS11-203ENST00000529545 SHOXO15266 292 aa6.74□□□□□ -1.33
VPS11-203ENST00000529545 SPRY2O43597 315 aa6.74□□□□□ -1.33
VPS11-203ENST00000529545 DEDDO75618 318 aa6.74□□□□□ -1.33
VPS11-203ENST00000529545 NAPSAO96009 420 aa6.74□□□□□ -1.33
VPS11-203ENST00000529545 ATF4P18848 351 aaPredicted RBP6.74□□□□□ -1.33
VPS11-203ENST00000529545 RASSF2P50749 326 aa6.74□□□□□ -1.33
VPS11-203ENST00000529545 APOC4P55056 127 aa6.74□□□□□ -1.33
VPS11-203ENST00000529545 SSBP2P81877 361 aaPredicted RBP6.74□□□□□ -1.33
VPS11-203ENST00000529545 TAGLNQ01995 201 aaKnown RBP6.74□□□□□ -1.33
VPS11-203ENST00000529545 GLT8D1Q68CQ7 371 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms