RNA–Protein interactions for RNA: ENST00000529355.1

CTR9-204, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-204ENST00000529355 HLA-AP01891 365 aaKnown RBP2.29□□□□□ -2.04
CTR9-204ENST00000529355 APOC3P02656 99 aa2.29□□□□□ -2.04
CTR9-204ENST00000529355 MT-ND4LP03901 98 aa2.29□□□□□ -2.04
CTR9-204ENST00000529355 SHBGP04278 402 aa2.29□□□□□ -2.04
CTR9-204ENST00000529355 SERPINA7P05543 415 aa2.29□□□□□ -2.04
CTR9-204ENST00000529355 CRYBA1P05813 215 aa2.29□□□□□ -2.04
CTR9-204ENST00000529355 C8orf88P0DMB2 117 aa2.29□□□□□ -2.04
CTR9-204ENST00000529355 PMCHP20382 165 aa2.29□□□□□ -2.04
CTR9-204ENST00000529355 GZMHP20718 246 aa2.29□□□□□ -2.04
CTR9-204ENST00000529355 CFHR2P36980 270 aa2.29□□□□□ -2.04
CTR9-204ENST00000529355 DNASE1L1P49184 302 aa2.29□□□□□ -2.04
CTR9-204ENST00000529355 RAB8AP61006 207 aa2.29□□□□□ -2.04
CTR9-204ENST00000529355 NCS1P62166 190 aa2.29□□□□□ -2.04
CTR9-204ENST00000529355 RPS23P62266 143 aaKnown RBP2.29□□□□□ -2.04
CTR9-204ENST00000529355 DCDP81605 110 aaKnown RBP2.29□□□□□ -2.04
CTR9-204ENST00000529355 CDK6Q00534 326 aa2.29□□□□□ -2.04
CTR9-204ENST00000529355 CDK5Q00535 292 aa2.29□□□□□ -2.04
CTR9-204ENST00000529355 MYL5Q02045 173 aa2.29□□□□□ -2.04
CTR9-204ENST00000529355 SP4Q02446 784 aa2.29□□□□□ -2.04
CTR9-204ENST00000529355 MLLT11Q13015 90 aaPredicted RBP2.29□□□□□ -2.04
CTR9-204ENST00000529355 PEA15Q15121 130 aa2.29□□□□□ -2.04
CTR9-204ENST00000529355 Q5BKY6 102 aa2.29□□□□□ -2.04
CTR9-204ENST00000529355 STUMQ69YW2 141 aa2.29□□□□□ -2.04
CTR9-204ENST00000529355 WDR59Q6PJI9 974 aa2.29□□□□□ -2.04
CTR9-204ENST00000529355 CD200R1LQ6Q8B3 271 aa2.29□□□□□ -2.04
CTR9-204ENST00000529355 TOMM20LQ6UXN7 152 aa2.29□□□□□ -2.04
CTR9-204ENST00000529355 FA2HQ7L5A8 372 aa2.29□□□□□ -2.04
CTR9-204ENST00000529355 DEFB128Q7Z7B8 93 aa2.29□□□□□ -2.04
CTR9-204ENST00000529355 MIR7-3HGQ8N6C7 128 aa2.29□□□□□ -2.04
CTR9-204ENST00000529355 C8orf31Q8N9H6 132 aa2.29□□□□□ -2.04
CTR9-204ENST00000529355 CDRT4Q8N9R6 151 aa2.29□□□□□ -2.04
CTR9-204ENST00000529355 UBAC2Q8NBM4 344 aa2.29□□□□□ -2.04
CTR9-204ENST00000529355 BPIFB6Q8NFQ5 453 aa2.29□□□□□ -2.04
CTR9-204ENST00000529355 TSTD1Q8NFU3 115 aa2.29□□□□□ -2.04
CTR9-204ENST00000529355 SLC26A10Q8NG04 563 aa2.29□□□□□ -2.04
CTR9-204ENST00000529355 OR6K2Q8NGY2 324 aa2.29□□□□□ -2.04
CTR9-204ENST00000529355 SMARCD1Q96GM5 515 aa2.29□□□□□ -2.04
CTR9-204ENST00000529355 REEP6Q96HR9 211 aa2.29□□□□□ -2.04
CTR9-204ENST00000529355 BTF3L4Q96K17 158 aa2.29□□□□□ -2.04
CTR9-204ENST00000529355 ERMAPQ96PL5 475 aaPredicted RBP2.29□□□□□ -2.04
CTR9-204ENST00000529355 OR2M4Q96R27 311 aa2.29□□□□□ -2.04
CTR9-204ENST00000529355 OR52B2Q96RD2 323 aa2.29□□□□□ -2.04
CTR9-204ENST00000529355 CMSS1Q9BQ75 279 aaKnown RBP2.29□□□□□ -2.04
CTR9-204ENST00000529355 PBDC1Q9BVG4 233 aa2.29□□□□□ -2.04
CTR9-204ENST00000529355 SNHG12Q9BXW3 62 aa2.29□□□□□ -2.04
CTR9-204ENST00000529355 MS4A8Q9BY19 250 aa2.29□□□□□ -2.04
CTR9-204ENST00000529355 SAMD10Q9BYL1 202 aa2.29□□□□□ -2.04
CTR9-204ENST00000529355 REG4Q9BYZ8 158 aa2.29□□□□□ -2.04
CTR9-204ENST00000529355 CHST5Q9GZS9 411 aa2.29□□□□□ -2.04
CTR9-204ENST00000529355 DSN1Q9H410 356 aa2.29□□□□□ -2.04
CTR9-204ENST00000529355 SMCO4Q9NRQ5 59 aa2.29□□□□□ -2.04
CTR9-204ENST00000529355 CLN6Q9NWW5 311 aa2.29□□□□□ -2.04
CTR9-204ENST00000529355 CLN8Q9UBY8 286 aa2.29□□□□□ -2.04
CTR9-204ENST00000529355 JPT1Q9UK76 154 aa2.29□□□□□ -2.04
CTR9-204ENST00000529355 TFR2Q9UP52 801 aa2.29□□□□□ -2.04
CTR9-204ENST00000529355 C14orf166Q9Y224 244 aaKnown RBP2.29□□□□□ -2.04
CTR9-204ENST00000529355 SLC35A3Q9Y2D2 325 aa2.29□□□□□ -2.04
CTR9-204ENST00000529355 SCN9AQ15858 1988 aa2.29□□□□□ -2.04
CTR9-204ENST00000529355 ZNF106Q9H2Y7 1883 aaKnown RBP2.28□□□□□ -2.04
CTR9-204ENST00000529355 SCN11AQ9UI33 1791 aa2.28□□□□□ -2.04
CTR9-204ENST00000529355 ARHGEF28Q8N1W1 1705 aaKnown RBP2.28□□□□□ -2.04
CTR9-204ENST00000529355 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.28□□□□□ -2.04
CTR9-204ENST00000529355 HMCN1Q96RW7 5635 aa2.28□□□□□ -2.04
CTR9-204ENST00000529355 URB2Q14146 1524 aaKnown RBP2.28□□□□□ -2.04
CTR9-204ENST00000529355 TNS3Q68CZ2 1445 aa2.28□□□□□ -2.04
CTR9-204ENST00000529355 ANKARQ7Z5J8 1434 aa2.28□□□□□ -2.04
CTR9-204ENST00000529355 ZNF99A8MXY4 864 aaPredicted RBP2.28□□□□□ -2.04
CTR9-204ENST00000529355 C21orf140B9A014 251 aa2.28□□□□□ -2.04
CTR9-204ENST00000529355 FTCDNL1E5RQL4 147 aa2.28□□□□□ -2.04
CTR9-204ENST00000529355 PLPP1O14494 284 aa2.28□□□□□ -2.04
CTR9-204ENST00000529355 SLC16A7O60669 478 aa2.28□□□□□ -2.04
CTR9-204ENST00000529355 STK16O75716 305 aa2.28□□□□□ -2.04
CTR9-204ENST00000529355 SC5DO75845 299 aa2.28□□□□□ -2.04
CTR9-204ENST00000529355 FARS2O95363 451 aaKnown RBP2.28□□□□□ -2.04
CTR9-204ENST00000529355 RAB36O95755 333 aa2.28□□□□□ -2.04
CTR9-204ENST00000529355 ARG1P05089 322 aa2.28□□□□□ -2.04
CTR9-204ENST00000529355 IL4P05112 153 aa2.28□□□□□ -2.04
CTR9-204ENST00000529355 OR5AC1P0C628 307 aa2.28□□□□□ -2.04
CTR9-204ENST00000529355 SMIM17P0DL12 118 aa2.28□□□□□ -2.04
CTR9-204ENST00000529355 OR13C7P0DN81 318 aa2.28□□□□□ -2.04
CTR9-204ENST00000529355 CD37P11049 281 aa2.28□□□□□ -2.04
CTR9-204ENST00000529355 HIST1H1TP22492 207 aaPredicted RBP2.28□□□□□ -2.04
CTR9-204ENST00000529355 RPS3P23396 243 aaKnown RBP eCLIP2.28□□□□□ -2.04
CTR9-204ENST00000529355 MYL9P24844 172 aa2.28□□□□□ -2.04
CTR9-204ENST00000529355 GABRR2P28476 465 aa2.28□□□□□ -2.04
CTR9-204ENST00000529355 LGALS7P47929 136 aa2.28□□□□□ -2.04
CTR9-204ENST00000529355 TAS2R43P59537 309 aa2.28□□□□□ -2.04
CTR9-204ENST00000529355 GABARAPL2P60520 117 aa2.28□□□□□ -2.04
CTR9-204ENST00000529355 RAB10P61026 200 aa2.28□□□□□ -2.04
CTR9-204ENST00000529355 UBE2KP61086 200 aa2.28□□□□□ -2.04
CTR9-204ENST00000529355 GNG3P63215 75 aa2.28□□□□□ -2.04
CTR9-204ENST00000529355 SELENOWP63302 87 aa2.28□□□□□ -2.04
CTR9-204ENST00000529355 CRADDP78560 199 aa2.28□□□□□ -2.04
CTR9-204ENST00000529355 DEFA5Q01523 94 aa2.28□□□□□ -2.04
CTR9-204ENST00000529355 RBMY1FQ15415 496 aaKnown RBP2.28□□□□□ -2.04
CTR9-204ENST00000529355 SURF2Q15527 256 aaPredicted RBP2.28□□□□□ -2.04
CTR9-204ENST00000529355 SPIN4Q56A73 249 aa2.28□□□□□ -2.04
CTR9-204ENST00000529355 TMEM128Q5BJH2 165 aa2.28□□□□□ -2.04
CTR9-204ENST00000529355 PYY3Q5JQD4 70 aa2.28□□□□□ -2.04
CTR9-204ENST00000529355 NCMAPQ5T1S8 102 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms