RNA–Protein interactions for RNA: ENST00000528739.5

CAPN1-216, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 341 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-216ENST00000528739 ZNF260Q3ZCT1 412 aa11.2□□□□□ -0.62
CAPN1-216ENST00000528739 FOXB2Q5VYV0 432 aa11.2□□□□□ -0.62
CAPN1-216ENST00000528739 ZNF660Q6AZW8 331 aaPredicted RBP11.2□□□□□ -0.62
CAPN1-216ENST00000528739 BVESQ8NE79 360 aa11.2□□□□□ -0.62
CAPN1-216ENST00000528739 DPF1Q92782 380 aa11.2□□□□□ -0.62
CAPN1-216ENST00000528739 OR5B12Q96R08 314 aa11.2□□□□□ -0.62
CAPN1-216ENST00000528739 DCUN1D5Q9BTE7 237 aa11.2□□□□□ -0.62
CAPN1-216ENST00000528739 DCSTAMPQ9H295 470 aa11.2□□□□□ -0.62
CAPN1-216ENST00000528739 NECAP2Q9NVZ3 263 aa11.2□□□□□ -0.62
CAPN1-216ENST00000528739 SHOXO15266 292 aa11.19□□□□□ -0.62
CAPN1-216ENST00000528739 SLC25A17O43808 307 aa11.19□□□□□ -0.62
CAPN1-216ENST00000528739 PROP1O75360 226 aa11.19□□□□□ -0.62
CAPN1-216ENST00000528739 TUSC2O75896 110 aa11.19□□□□□ -0.62
CAPN1-216ENST00000528739 CNIH1O95406 144 aa11.19□□□□□ -0.62
CAPN1-216ENST00000528739 DUS4LO95620 317 aaKnown RBP11.19□□□□□ -0.62
CAPN1-216ENST00000528739 DIRAS3O95661 229 aa11.19□□□□□ -0.62
CAPN1-216ENST00000528739 CA2P00918 260 aa11.19□□□□□ -0.62
CAPN1-216ENST00000528739 CD40LGP29965 261 aa11.19□□□□□ -0.62
CAPN1-216ENST00000528739 LUMP51884 338 aaPredicted RBP11.19□□□□□ -0.62
CAPN1-216ENST00000528739 SCAND1P57086 179 aa11.19□□□□□ -0.62
CAPN1-216ENST00000528739 PPP1R27Q86WC6 154 aa11.19□□□□□ -0.62
CAPN1-216ENST00000528739 CROCCP3Q8IVE0 287 aa11.19□□□□□ -0.62
CAPN1-216ENST00000528739 H1FOOQ8IZA3 346 aaPredicted RBP11.19□□□□□ -0.62
CAPN1-216ENST00000528739 LINC00482Q8N8I6 264 aa11.19□□□□□ -0.62
CAPN1-216ENST00000528739 MRAPQ8TCY5 172 aa11.19□□□□□ -0.62
CAPN1-216ENST00000528739 FAM103A1Q9BTL3 118 aaKnown RBP11.19□□□□□ -0.62
CAPN1-216ENST00000528739 TOLLIPQ9H0E2 274 aa11.19□□□□□ -0.62
CAPN1-216ENST00000528739 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.19□□□□□ -0.62
CAPN1-216ENST00000528739 PKD1L1Q8TDX9 2849 aa11.19□□□□□ -0.62
CAPN1-216ENST00000528739 CDX1P47902 265 aaPredicted RBP11.18□□□□□ -0.62
CAPN1-216ENST00000528739 CFHR3Q02985 330 aa11.18□□□□□ -0.62
CAPN1-216ENST00000528739 CNIH2Q6PI25 160 aa11.18□□□□□ -0.62
CAPN1-216ENST00000528739 UNQ5815/PRO19632Q6UWF5 114 aa11.18□□□□□ -0.62
CAPN1-216ENST00000528739 ETV3LQ6ZN32 361 aa11.18□□□□□ -0.62
CAPN1-216ENST00000528739 Q6ZS49 121 aa11.18□□□□□ -0.62
CAPN1-216ENST00000528739 REC114Q7Z4M0 266 aa11.18□□□□□ -0.62
CAPN1-216ENST00000528739 GRPEL2Q8TAA5 225 aa11.18□□□□□ -0.62
CAPN1-216ENST00000528739 YIPF6Q96EC8 236 aa11.18□□□□□ -0.62
CAPN1-216ENST00000528739 S100A16Q96FQ6 103 aaKnown RBP11.18□□□□□ -0.62
CAPN1-216ENST00000528739 RAX2Q96IS3 184 aa11.18□□□□□ -0.62
CAPN1-216ENST00000528739 HARBI1Q96MB7 349 aa11.18□□□□□ -0.62
CAPN1-216ENST00000528739 MCRIP2Q9BUT9 160 aaKnown RBP11.18□□□□□ -0.62
CAPN1-216ENST00000528739 GPR61Q9BZJ8 451 aa11.18□□□□□ -0.62
CAPN1-216ENST00000528739 KLK15Q9H2R5 256 aa11.18□□□□□ -0.62
CAPN1-216ENST00000528739 ZNF355PQ9NSJ1 428 aa11.18□□□□□ -0.62
CAPN1-216ENST00000528739 SPATA2Q9UM82 520 aa11.18□□□□□ -0.62
CAPN1-216ENST00000528739 GAB2Q9UQC2 676 aa11.18□□□□□ -0.62
CAPN1-216ENST00000528739 SPDEFO95238 335 aa11.17□□□□□ -0.62
CAPN1-216ENST00000528739 RRASP10301 218 aa11.17□□□□□ -0.62
CAPN1-216ENST00000528739 PSMB8P28062 276 aa11.17□□□□□ -0.62
CAPN1-216ENST00000528739 PPIFP30405 207 aaKnown RBP11.17□□□□□ -0.62
CAPN1-216ENST00000528739 HOXD3P31249 432 aaPredicted RBP11.17□□□□□ -0.62
CAPN1-216ENST00000528739 RPS19P39019 145 aaKnown RBP11.17□□□□□ -0.62
CAPN1-216ENST00000528739 LGALS7P47929 136 aa11.17□□□□□ -0.62
CAPN1-216ENST00000528739 RAB9AP51151 201 aa11.17□□□□□ -0.62
CAPN1-216ENST00000528739 NDPQ00604 133 aa11.17□□□□□ -0.62
CAPN1-216ENST00000528739 TAGLNQ01995 201 aaKnown RBP11.17□□□□□ -0.62
CAPN1-216ENST00000528739 FXYD3Q14802 87 aa11.17□□□□□ -0.62
CAPN1-216ENST00000528739 ACTBL2Q562R1 376 aa11.17□□□□□ -0.62
CAPN1-216ENST00000528739 KPRPQ5T749 579 aaPredicted RBP11.17□□□□□ -0.62
CAPN1-216ENST00000528739 LFNGQ8NES3 379 aa11.17□□□□□ -0.62
CAPN1-216ENST00000528739 BEST4Q8NFU0 473 aa11.17□□□□□ -0.62
CAPN1-216ENST00000528739 CASTOR1Q8WTX7 329 aa11.17□□□□□ -0.62
CAPN1-216ENST00000528739 SLC25A38Q96DW6 304 aa11.17□□□□□ -0.62
CAPN1-216ENST00000528739 ADTRPQ96IZ2 230 aa11.17□□□□□ -0.62
CAPN1-216ENST00000528739 MS4A10Q96PG2 267 aa11.17□□□□□ -0.62
CAPN1-216ENST00000528739 AURKAIP1Q9NWT8 199 aaPredicted RBP11.17□□□□□ -0.62
CAPN1-216ENST00000528739 ANXA10Q9UJ72 324 aa11.17□□□□□ -0.62
CAPN1-216ENST00000528739 FOXA2Q9Y261 457 aaPredicted RBP11.17□□□□□ -0.62
CAPN1-216ENST00000528739 VSIG4Q9Y279 399 aa11.17□□□□□ -0.62
CAPN1-216ENST00000528739 OR2W1Q9Y3N9 320 aa11.17□□□□□ -0.62
CAPN1-216ENST00000528739 A0A0A6YYH2 397 aa11.16□□□□□ -0.62
CAPN1-216ENST00000528739 MEIS3P1A6NDR6 274 aa11.16□□□□□ -0.62
CAPN1-216ENST00000528739 A6NJ64 397 aa11.16□□□□□ -0.62
CAPN1-216ENST00000528739 SSX5O60225 188 aa11.16□□□□□ -0.62
CAPN1-216ENST00000528739 CRYZL1O95825 349 aa11.16□□□□□ -0.62
CAPN1-216ENST00000528739 DEFB121Q5J5C9 76 aa11.16□□□□□ -0.62
CAPN1-216ENST00000528739 OR2B11Q5JQS5 317 aa11.16□□□□□ -0.62
CAPN1-216ENST00000528739 ZNF562Q6V9R5 426 aa11.16□□□□□ -0.62
CAPN1-216ENST00000528739 ZNF645Q8N7E2 425 aa11.16□□□□□ -0.62
CAPN1-216ENST00000528739 GVQW1Q8N7I0 195 aa11.16□□□□□ -0.62
CAPN1-216ENST00000528739 SAMD12Q8N8I0 201 aa11.16□□□□□ -0.62
CAPN1-216ENST00000528739 OR11H1Q8NG94 326 aa11.16□□□□□ -0.62
CAPN1-216ENST00000528739 OR5M8Q8NGP6 311 aa11.16□□□□□ -0.62
CAPN1-216ENST00000528739 C4orf3Q8WVX3 66 aa11.16□□□□□ -0.62
CAPN1-216ENST00000528739 ARPC1AQ92747 370 aa11.16□□□□□ -0.62
CAPN1-216ENST00000528739 P2RX4Q99571 388 aa11.16□□□□□ -0.62
CAPN1-216ENST00000528739 PHB2Q99623 299 aa11.16□□□□□ -0.62
CAPN1-216ENST00000528739 IFT46Q9NQC8 304 aa11.16□□□□□ -0.62
CAPN1-216ENST00000528739 TPSG1Q9NRR2 321 aa11.16□□□□□ -0.62
CAPN1-216ENST00000528739 ZNF580Q9UK33 172 aa11.16□□□□□ -0.62
CAPN1-216ENST00000528739 PRELID3BQ9Y3B1 194 aa11.16□□□□□ -0.62
CAPN1-216ENST00000528739 FBXO7Q9Y3I1 522 aa11.16□□□□□ -0.62
CAPN1-216ENST00000528739 PLXNB1O43157 2135 aa11.15□□□□□ -0.62
CAPN1-216ENST00000528739 TMEM127O75204 238 aa11.15□□□□□ -0.62
CAPN1-216ENST00000528739 PTHLHP12272 177 aa11.15□□□□□ -0.62
CAPN1-216ENST00000528739 DUTP33316 252 aaKnown RBP11.15□□□□□ -0.62
CAPN1-216ENST00000528739 VBP1P61758 197 aa11.15□□□□□ -0.62
CAPN1-216ENST00000528739 VMA21Q3ZAQ7 101 aa11.15□□□□□ -0.62
CAPN1-216ENST00000528739 UBE2NLQ5JXB2 153 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms