RNA–Protein interactions for RNA: ENST00000528563.5

HIF3A-211, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2

Gene HIF3A, Length 1,486 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-211ENST00000528563 IGKV1D-13A0A0B4J2D9 117 aa13.22□□□□□ -0.29
HIF3A-211ENST00000528563 J3QRK9 145 aa13.22□□□□□ -0.29
HIF3A-211ENST00000528563 FCN1O00602 326 aa13.22□□□□□ -0.29
HIF3A-211ENST00000528563 APOA2P02652 100 aa13.22□□□□□ -0.29
HIF3A-211ENST00000528563 IGKV1-13P0DP09 117 aa13.22□□□□□ -0.29
HIF3A-211ENST00000528563 RPS16P62249 146 aaKnown RBP13.22□□□□□ -0.29
HIF3A-211ENST00000528563 PSG5Q15238 335 aa13.22□□□□□ -0.29
HIF3A-211ENST00000528563 TEX38Q6PEX7 206 aa13.22□□□□□ -0.29
HIF3A-211ENST00000528563 DDB2Q92466 427 aa13.22□□□□□ -0.29
HIF3A-211ENST00000528563 SNAPC3Q92966 411 aa13.22□□□□□ -0.29
HIF3A-211ENST00000528563 TSNAXQ99598 290 aaKnown RBP13.22□□□□□ -0.29
HIF3A-211ENST00000528563 SLC35D1Q9NTN3 355 aa13.22□□□□□ -0.29
HIF3A-211ENST00000528563 SLC22A5O76082 557 aa13.21□□□□□ -0.3
HIF3A-211ENST00000528563 IGLV2-14P01704 120 aa13.21□□□□□ -0.3
HIF3A-211ENST00000528563 ZNF182P17025 639 aaPredicted RBP13.21□□□□□ -0.3
HIF3A-211ENST00000528563 ELK1P19419 428 aa13.21□□□□□ -0.3
HIF3A-211ENST00000528563 DUTP33316 252 aaKnown RBP13.21□□□□□ -0.3
HIF3A-211ENST00000528563 LGALS7P47929 136 aa13.21□□□□□ -0.3
HIF3A-211ENST00000528563 THBS3P49746 956 aa13.21□□□□□ -0.3
HIF3A-211ENST00000528563 ARPC4P59998 168 aa13.21□□□□□ -0.3
HIF3A-211ENST00000528563 CX3CL1P78423 397 aa13.21□□□□□ -0.3
HIF3A-211ENST00000528563 ZNF660Q6AZW8 331 aaPredicted RBP13.21□□□□□ -0.3
HIF3A-211ENST00000528563 RNF152Q8N8N0 203 aa13.21□□□□□ -0.3
HIF3A-211ENST00000528563 OR5AP2Q8NGF4 316 aa13.21□□□□□ -0.3
HIF3A-211ENST00000528563 ADTRPQ96IZ2 230 aa13.21□□□□□ -0.3
HIF3A-211ENST00000528563 ZFP57Q9NU63 452 aa13.21□□□□□ -0.3
HIF3A-211ENST00000528563 ANAPC10Q9UM13 185 aa13.21□□□□□ -0.3
HIF3A-211ENST00000528563 SMIM31A0A1B0GVY4 71 aa13.2□□□□□ -0.3
HIF3A-211ENST00000528563 MEIS3P1A6NDR6 274 aa13.2□□□□□ -0.3
HIF3A-211ENST00000528563 LINC00473A8K010 186 aa13.2□□□□□ -0.3
HIF3A-211ENST00000528563 HPGDSO60760 199 aa13.2□□□□□ -0.3
HIF3A-211ENST00000528563 IGLV2-23P01705 113 aa13.2□□□□□ -0.3
HIF3A-211ENST00000528563 IGHG4P01861 327 aa13.2□□□□□ -0.3
HIF3A-211ENST00000528563 FCER2P06734 321 aa13.2□□□□□ -0.3
HIF3A-211ENST00000528563 OR5H8P0DN80 308 aa13.2□□□□□ -0.3
HIF3A-211ENST00000528563 NAT1P18440 290 aa13.2□□□□□ -0.3
HIF3A-211ENST00000528563 PRSS3P35030 304 aa13.2□□□□□ -0.3
HIF3A-211ENST00000528563 RPL5P46777 297 aaKnown RBP13.2□□□□□ -0.3
HIF3A-211ENST00000528563 FOXE3Q13461 319 aa13.2□□□□□ -0.3
HIF3A-211ENST00000528563 MZT2AQ6P582 158 aa13.2□□□□□ -0.3
HIF3A-211ENST00000528563 ZNF645Q8N7E2 425 aa13.2□□□□□ -0.3
HIF3A-211ENST00000528563 BVESQ8NE79 360 aa13.2□□□□□ -0.3
HIF3A-211ENST00000528563 NECAP2Q9NVZ3 263 aa13.2□□□□□ -0.3
HIF3A-211ENST00000528563 ATP6V0E1O15342 81 aa13.19□□□□□ -0.3
HIF3A-211ENST00000528563 SPDEFO95238 335 aa13.19□□□□□ -0.3
HIF3A-211ENST00000528563 RRASP10301 218 aa13.19□□□□□ -0.3
HIF3A-211ENST00000528563 EGR2P11161 476 aaPredicted RBP13.19□□□□□ -0.3
HIF3A-211ENST00000528563 PPIFP30405 207 aaKnown RBP13.19□□□□□ -0.3
HIF3A-211ENST00000528563 FCGR2CP31995 323 aa13.19□□□□□ -0.3
HIF3A-211ENST00000528563 RPL23AP62750 156 aaKnown RBP13.19□□□□□ -0.3
HIF3A-211ENST00000528563 SPCS2Q15005 226 aa13.19□□□□□ -0.3
HIF3A-211ENST00000528563 TMEM177Q53S58 311 aa13.19□□□□□ -0.3
HIF3A-211ENST00000528563 ZNF562Q6V9R5 426 aa13.19□□□□□ -0.3
HIF3A-211ENST00000528563 CLVS1Q8IUQ0 354 aaPredicted RBP13.19□□□□□ -0.3
HIF3A-211ENST00000528563 WFDC9Q8NEX5 89 aa13.19□□□□□ -0.3
HIF3A-211ENST00000528563 GIMAP1Q8WWP7 306 aa13.19□□□□□ -0.3
HIF3A-211ENST00000528563 METTL1Q9UBP6 276 aaKnown RBP13.19□□□□□ -0.3
HIF3A-211ENST00000528563 RBMX2Q9Y388 322 aaKnown RBP13.19□□□□□ -0.3
HIF3A-211ENST00000528563 WSB1Q9Y6I7 421 aa13.19□□□□□ -0.3
HIF3A-211ENST00000528563 CMYA5Q8N3K9 4069 aa13.19□□□□□ -0.3
HIF3A-211ENST00000528563 SRRM4A7MD48 611 aaKnown RBP13.18□□□□□ -0.3
HIF3A-211ENST00000528563 G3V318 75 aa13.18□□□□□ -0.3
HIF3A-211ENST00000528563 CRYGBP07316 175 aa13.18□□□□□ -0.3
HIF3A-211ENST00000528563 ELANEP08246 267 aa13.18□□□□□ -0.3
HIF3A-211ENST00000528563 VDAC1P21796 283 aa13.18□□□□□ -0.3
HIF3A-211ENST00000528563 AADACP22760 399 aa13.18□□□□□ -0.3
HIF3A-211ENST00000528563 CRIP2P52943 208 aaPredicted RBP13.18□□□□□ -0.3
HIF3A-211ENST00000528563 TMBIM6P55061 237 aa13.18□□□□□ -0.3
HIF3A-211ENST00000528563 EIF4EBP1Q13541 118 aaPredicted RBP13.18□□□□□ -0.3
HIF3A-211ENST00000528563 PLGLAQ15195 96 aa13.18□□□□□ -0.3
HIF3A-211ENST00000528563 RTL8BQ17RB0 113 aa13.18□□□□□ -0.3
HIF3A-211ENST00000528563 KHDC1LQ5JSQ8 128 aa13.18□□□□□ -0.3
HIF3A-211ENST00000528563 LYSMD2Q8IV50 215 aa13.18□□□□□ -0.3
HIF3A-211ENST00000528563 GPX8Q8TED1 209 aa13.18□□□□□ -0.3
HIF3A-211ENST00000528563 AP3S1Q92572 193 aa13.18□□□□□ -0.3
HIF3A-211ENST00000528563 IFT46Q9NQC8 304 aa13.18□□□□□ -0.3
HIF3A-211ENST00000528563 PARP11Q9NR21 331 aa13.18□□□□□ -0.3
HIF3A-211ENST00000528563 MRPS7Q9Y2R9 242 aaKnown RBP13.18□□□□□ -0.3
HIF3A-211ENST00000528563 FBXO7Q9Y3I1 522 aa13.18□□□□□ -0.3
HIF3A-211ENST00000528563 NUBP2Q9Y5Y2 271 aa13.18□□□□□ -0.3
HIF3A-211ENST00000528563 TRAV41A0A0B4J266 112 aa13.17□□□□□ -0.3
HIF3A-211ENST00000528563 SLC25A17O43808 307 aa13.17□□□□□ -0.3
HIF3A-211ENST00000528563 RPLP1P05386 114 aaKnown RBP13.17□□□□□ -0.3
HIF3A-211ENST00000528563 PSMB8P28062 276 aa13.17□□□□□ -0.3
HIF3A-211ENST00000528563 NDPQ00604 133 aa13.17□□□□□ -0.3
HIF3A-211ENST00000528563 CDK10Q15131 360 aa13.17□□□□□ -0.3
HIF3A-211ENST00000528563 C19orf54Q5BKX5 351 aa13.17□□□□□ -0.3
HIF3A-211ENST00000528563 DHRS11Q6UWP2 260 aa13.17□□□□□ -0.3
HIF3A-211ENST00000528563 C18orf65Q6ZTR6 163 aa13.17□□□□□ -0.3
HIF3A-211ENST00000528563 OVCH2Q7RTZ1 564 aa13.17□□□□□ -0.3
HIF3A-211ENST00000528563 MINDY2Q8NBR6 621 aa13.17□□□□□ -0.3
HIF3A-211ENST00000528563 RAB2BQ8WUD1 216 aa13.17□□□□□ -0.3
HIF3A-211ENST00000528563 PPYP01298 95 aa13.16□□□□□ -0.3
HIF3A-211ENST00000528563 IGLV1-40P01703 118 aa13.16□□□□□ -0.3
HIF3A-211ENST00000528563 PF4V1P10720 104 aa13.16□□□□□ -0.3
HIF3A-211ENST00000528563 SLC6A1P30531 599 aa13.16□□□□□ -0.3
HIF3A-211ENST00000528563 RFX2P48378 723 aa13.16□□□□□ -0.3
HIF3A-211ENST00000528563 RPL30P62888 115 aaKnown RBP13.16□□□□□ -0.3
HIF3A-211ENST00000528563 CXorf66Q5JRM2 361 aaPredicted RBP13.16□□□□□ -0.3
HIF3A-211ENST00000528563 LCNL1Q6ZST4 164 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms