RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 SPDEFO95238 335 aa20.64■□□□□ 0.89
TSPAN4-217ENST00000527644 PSMB8P28062 276 aa20.64■□□□□ 0.89
TSPAN4-217ENST00000527644 PPIFP30405 207 aaKnown RBP20.64■□□□□ 0.89
TSPAN4-217ENST00000527644 CDX1P47902 265 aaPredicted RBP20.64■□□□□ 0.89
TSPAN4-217ENST00000527644 THBS3P49746 956 aa20.64■□□□□ 0.89
TSPAN4-217ENST00000527644 TAGLNQ01995 201 aaKnown RBP20.64■□□□□ 0.89
TSPAN4-217ENST00000527644 PSG5Q15238 335 aa20.64■□□□□ 0.89
TSPAN4-217ENST00000527644 ETV3LQ6ZN32 361 aa20.64■□□□□ 0.89
TSPAN4-217ENST00000527644 ANXA10Q9UJ72 324 aa20.64■□□□□ 0.89
TSPAN4-217ENST00000527644 TRAV41A0A0B4J266 112 aa20.63■□□□□ 0.89
TSPAN4-217ENST00000527644 G3V318 75 aa20.63■□□□□ 0.89
TSPAN4-217ENST00000527644 MYCNOSP40205 109 aa20.63■□□□□ 0.89
TSPAN4-217ENST00000527644 CX3CL1P78423 397 aa20.63■□□□□ 0.89
TSPAN4-217ENST00000527644 LCNL1Q6ZST4 164 aa20.63■□□□□ 0.89
TSPAN4-217ENST00000527644 LINC00482Q8N8I6 264 aa20.63■□□□□ 0.89
TSPAN4-217ENST00000527644 METTL1Q9UBP6 276 aaKnown RBP20.63■□□□□ 0.89
TSPAN4-217ENST00000527644 FCN1O00602 326 aa20.62■□□□□ 0.89
TSPAN4-217ENST00000527644 IGLL1P15814 213 aa20.62■□□□□ 0.89
TSPAN4-217ENST00000527644 CRIP2P52943 208 aaPredicted RBP20.62■□□□□ 0.89
TSPAN4-217ENST00000527644 MRPL41Q8IXM3 137 aaKnown RBP20.62■□□□□ 0.89
TSPAN4-217ENST00000527644 C5orf30Q96GV9 206 aa20.62■□□□□ 0.89
TSPAN4-217ENST00000527644 RCC1LQ96I51 464 aaKnown RBP20.62■□□□□ 0.89
TSPAN4-217ENST00000527644 ADTRPQ96IZ2 230 aa20.62■□□□□ 0.89
TSPAN4-217ENST00000527644 FUNDC2Q9BWH2 189 aa20.62■□□□□ 0.89
TSPAN4-217ENST00000527644 AUNIPQ9H7T9 357 aa20.62■□□□□ 0.89
TSPAN4-217ENST00000527644 OR2W1Q9Y3N9 320 aa20.62■□□□□ 0.89
TSPAN4-217ENST00000527644 DUS4LO95620 317 aaKnown RBP20.61■□□□□ 0.89
TSPAN4-217ENST00000527644 LGALS7P47929 136 aa20.61■□□□□ 0.89
TSPAN4-217ENST00000527644 NDPQ00604 133 aa20.61■□□□□ 0.89
TSPAN4-217ENST00000527644 CBX3Q13185 183 aa20.61■□□□□ 0.89
TSPAN4-217ENST00000527644 ZNF562Q6V9R5 426 aa20.61■□□□□ 0.89
TSPAN4-217ENST00000527644 OR13F1Q8NGS4 319 aa20.61■□□□□ 0.89
TSPAN4-217ENST00000527644 S100A16Q96FQ6 103 aaKnown RBP20.61■□□□□ 0.89
TSPAN4-217ENST00000527644 IGLV1-40P01703 118 aa20.6■□□□□ 0.89
TSPAN4-217ENST00000527644 HLA-DQB1P01920 261 aa20.6■□□□□ 0.89
TSPAN4-217ENST00000527644 RRASP10301 218 aa20.6■□□□□ 0.89
TSPAN4-217ENST00000527644 NFYAP23511 347 aaPredicted RBP20.6■□□□□ 0.89
TSPAN4-217ENST00000527644 LUMP51884 338 aaPredicted RBP20.6■□□□□ 0.89
TSPAN4-217ENST00000527644 TMEM65Q6PI78 240 aa20.6■□□□□ 0.89
TSPAN4-217ENST00000527644 MINDY2Q8NBR6 621 aa20.6■□□□□ 0.89
TSPAN4-217ENST00000527644 SLC25A46Q96AG3 418 aa20.6■□□□□ 0.89
TSPAN4-217ENST00000527644 CLCC1Q96S66 551 aa20.6■□□□□ 0.89
TSPAN4-217ENST00000527644 P2RX4Q99571 388 aa20.6■□□□□ 0.89
TSPAN4-217ENST00000527644 XRCC3O43542 346 aa20.59■□□□□ 0.89
TSPAN4-217ENST00000527644 SLC22A5O76082 557 aa20.59■□□□□ 0.89
TSPAN4-217ENST00000527644 DUTP33316 252 aaKnown RBP20.59■□□□□ 0.89
TSPAN4-217ENST00000527644 TMEM267Q0VDI3 215 aaPredicted RBP20.59■□□□□ 0.89
TSPAN4-217ENST00000527644 RTL8BQ17RB0 113 aa20.59■□□□□ 0.89
TSPAN4-217ENST00000527644 UBE2NLQ5JXB2 153 aa20.59■□□□□ 0.89
TSPAN4-217ENST00000527644 HOGA1Q86XE5 327 aa20.59■□□□□ 0.89
TSPAN4-217ENST00000527644 ZNF645Q8N7E2 425 aa20.59■□□□□ 0.89
TSPAN4-217ENST00000527644 TCTEX1D1Q8N7M0 179 aa20.59■□□□□ 0.89
TSPAN4-217ENST00000527644 BVESQ8NE79 360 aa20.59■□□□□ 0.89
TSPAN4-217ENST00000527644 BEST4Q8NFU0 473 aa20.59■□□□□ 0.89
TSPAN4-217ENST00000527644 MYOZ3Q8TDC0 251 aa20.59■□□□□ 0.89
TSPAN4-217ENST00000527644 FBXO7Q9Y3I1 522 aa20.59■□□□□ 0.89
TSPAN4-217ENST00000527644 J3QRK9 145 aa20.58■□□□□ 0.89
TSPAN4-217ENST00000527644 SLC25A17O43808 307 aa20.58■□□□□ 0.89
TSPAN4-217ENST00000527644 TMEM177Q53S58 311 aa20.58■□□□□ 0.89
TSPAN4-217ENST00000527644 ABHD5Q8WTS1 349 aa20.58■□□□□ 0.89
TSPAN4-217ENST00000527644 DDB2Q92466 427 aa20.58■□□□□ 0.89
TSPAN4-217ENST00000527644 KCTD12Q96CX2 325 aaKnown RBP20.58■□□□□ 0.89
TSPAN4-217ENST00000527644 RAX2Q96IS3 184 aa20.58■□□□□ 0.89
TSPAN4-217ENST00000527644 NUBP2Q9Y5Y2 271 aa20.58■□□□□ 0.89
TSPAN4-217ENST00000527644 CCL24O00175 119 aa20.57■□□□□ 0.88
TSPAN4-217ENST00000527644 CA2P00918 260 aa20.57■□□□□ 0.88
TSPAN4-217ENST00000527644 IGLV2-23P01705 113 aa20.57■□□□□ 0.88
TSPAN4-217ENST00000527644 EGR2P11161 476 aaPredicted RBP20.57■□□□□ 0.88
TSPAN4-217ENST00000527644 CBX5P45973 191 aa20.57■□□□□ 0.88
TSPAN4-217ENST00000527644 ARPC4P59998 168 aa20.57■□□□□ 0.88
TSPAN4-217ENST00000527644 NCS1P62166 190 aa20.57■□□□□ 0.88
TSPAN4-217ENST00000527644 ECSCRQ19T08 205 aa20.57■□□□□ 0.88
TSPAN4-217ENST00000527644 C19orf54Q5BKX5 351 aa20.57■□□□□ 0.88
TSPAN4-217ENST00000527644 REC114Q7Z4M0 266 aa20.57■□□□□ 0.88
TSPAN4-217ENST00000527644 GVQW1Q8N7I0 195 aa20.57■□□□□ 0.88
TSPAN4-217ENST00000527644 SAMD12Q8N8I0 201 aa20.57■□□□□ 0.88
TSPAN4-217ENST00000527644 C4orf3Q8WVX3 66 aa20.57■□□□□ 0.88
TSPAN4-217ENST00000527644 HARBI1Q96MB7 349 aa20.57■□□□□ 0.88
TSPAN4-217ENST00000527644 KLK15Q9H2R5 256 aa20.57■□□□□ 0.88
TSPAN4-217ENST00000527644 NECAP2Q9NVZ3 263 aa20.57■□□□□ 0.88
TSPAN4-217ENST00000527644 PRKDCP78527 4128 aaKnown RBP20.56■□□□□ 0.88
TSPAN4-217ENST00000527644 SHOXO15266 292 aa20.56■□□□□ 0.88
TSPAN4-217ENST00000527644 TUSC2O75896 110 aa20.56■□□□□ 0.88
TSPAN4-217ENST00000527644 SMIM18P0DKX4 95 aa20.56■□□□□ 0.88
TSPAN4-217ENST00000527644 VBP1P61758 197 aa20.56■□□□□ 0.88
TSPAN4-217ENST00000527644 FOXB2Q5VYV0 432 aa20.56■□□□□ 0.88
TSPAN4-217ENST00000527644 PPP1R27Q86WC6 154 aa20.56■□□□□ 0.88
TSPAN4-217ENST00000527644 UBE2E2Q96LR5 201 aa20.56■□□□□ 0.88
TSPAN4-217ENST00000527644 DUX3Q96PT4 197 aa20.56■□□□□ 0.88
TSPAN4-217ENST00000527644 FOXA2Q9Y261 457 aaPredicted RBP20.56■□□□□ 0.88
TSPAN4-217ENST00000527644 LINC00473A8K010 186 aa20.55■□□□□ 0.88
TSPAN4-217ENST00000527644 CRYGBP07316 175 aa20.55■□□□□ 0.88
TSPAN4-217ENST00000527644 RAB9AP51151 201 aa20.55■□□□□ 0.88
TSPAN4-217ENST00000527644 KIAA0141Q14154 515 aaPredicted RBP20.55■□□□□ 0.88
TSPAN4-217ENST00000527644 AKIRIN2Q53H80 203 aa20.55■□□□□ 0.88
TSPAN4-217ENST00000527644 ZNF491Q8N8L2 437 aa20.55■□□□□ 0.88
TSPAN4-217ENST00000527644 MCRIP2Q9BUT9 160 aaKnown RBP20.55■□□□□ 0.88
TSPAN4-217ENST00000527644 GPR61Q9BZJ8 451 aa20.55■□□□□ 0.88
TSPAN4-217ENST00000527644 TPSG1Q9NRR2 321 aa20.55■□□□□ 0.88
TSPAN4-217ENST00000527644 VSIG4Q9Y279 399 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms