RNA–Protein interactions for RNA: ENST00000527339.1

LTBP3-208, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 3

Gene LTBP3, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-208ENST00000527339 C11orf44Q8N8P7 122 aa13.71□□□□□ -0.21
LTBP3-208ENST00000527339 ADTRPQ96IZ2 230 aa13.71□□□□□ -0.21
LTBP3-208ENST00000527339 MMP27Q9H306 513 aa13.71□□□□□ -0.21
LTBP3-208ENST00000527339 SLC35D1Q9NTN3 355 aa13.71□□□□□ -0.21
LTBP3-208ENST00000527339 EXTL2Q9UBQ6 330 aa13.71□□□□□ -0.21
LTBP3-208ENST00000527339 IGKV1D-13A0A0B4J2D9 117 aa13.7□□□□□ -0.22
LTBP3-208ENST00000527339 J3QRK9 145 aa13.7□□□□□ -0.22
LTBP3-208ENST00000527339 SULT1C2O00338 296 aa13.7□□□□□ -0.22
LTBP3-208ENST00000527339 TSPAN15O95858 294 aa13.7□□□□□ -0.22
LTBP3-208ENST00000527339 IGKV1-13P0DP09 117 aa13.7□□□□□ -0.22
LTBP3-208ENST00000527339 CD28P10747 220 aa13.7□□□□□ -0.22
LTBP3-208ENST00000527339 FCGR2CP31995 323 aa13.7□□□□□ -0.22
LTBP3-208ENST00000527339 LINC00205P59089 165 aa13.7□□□□□ -0.22
LTBP3-208ENST00000527339 TAS2R46P59540 309 aa13.7□□□□□ -0.22
LTBP3-208ENST00000527339 C5orf64Q2M2E5 130 aa13.7□□□□□ -0.22
LTBP3-208ENST00000527339 OR5AU1Q8NGC0 362 aa13.7□□□□□ -0.22
LTBP3-208ENST00000527339 CHPT1Q8WUD6 406 aa13.7□□□□□ -0.22
LTBP3-208ENST00000527339 C15orf40Q8WUR7 153 aa13.7□□□□□ -0.22
LTBP3-208ENST00000527339 MIXL1Q9H2W2 232 aa13.7□□□□□ -0.22
LTBP3-208ENST00000527339 CCDC160A6NGH7 325 aa13.69□□□□□ -0.22
LTBP3-208ENST00000527339 AP4M1O00189 453 aa13.69□□□□□ -0.22
LTBP3-208ENST00000527339 CTDSP2O14595 271 aa13.69□□□□□ -0.22
LTBP3-208ENST00000527339 PPYP01298 95 aa13.69□□□□□ -0.22
LTBP3-208ENST00000527339 HLA-DRB1P01911 266 aa13.69□□□□□ -0.22
LTBP3-208ENST00000527339 IGKV1-16P04430 117 aa13.69□□□□□ -0.22
LTBP3-208ENST00000527339 RRASP10301 218 aa13.69□□□□□ -0.22
LTBP3-208ENST00000527339 AADACP22760 399 aa13.69□□□□□ -0.22
LTBP3-208ENST00000527339 DUTP33316 252 aaKnown RBP13.69□□□□□ -0.22
LTBP3-208ENST00000527339 CBX3Q13185 183 aa13.69□□□□□ -0.22
LTBP3-208ENST00000527339 C2orf68Q2NKX9 166 aa13.69□□□□□ -0.22
LTBP3-208ENST00000527339 LAX1Q8IWV1 398 aa13.69□□□□□ -0.22
LTBP3-208ENST00000527339 GIMAP1Q8WWP7 306 aa13.69□□□□□ -0.22
LTBP3-208ENST00000527339 FLYWCH2Q96CP2 140 aaKnown RBP13.69□□□□□ -0.22
LTBP3-208ENST00000527339 TSNAXQ99598 290 aaKnown RBP13.69□□□□□ -0.22
LTBP3-208ENST00000527339 HSPB9Q9BQS6 159 aa13.69□□□□□ -0.22
LTBP3-208ENST00000527339 EHFQ9NZC4 300 aa13.69□□□□□ -0.22
LTBP3-208ENST00000527339 ZNF107Q9UII5 783 aaPredicted RBP13.69□□□□□ -0.22
LTBP3-208ENST00000527339 RBMX2Q9Y388 322 aaKnown RBP13.69□□□□□ -0.22
LTBP3-208ENST00000527339 DNAH3Q8TD57 4116 aa13.68□□□□□ -0.22
LTBP3-208ENST00000527339 PSMB11A5LHX3 300 aa13.68□□□□□ -0.22
LTBP3-208ENST00000527339 LINC01548A6NM66 108 aa13.68□□□□□ -0.22
LTBP3-208ENST00000527339 RRHO14718 337 aa13.68□□□□□ -0.22
LTBP3-208ENST00000527339 PLXNB1O43157 2135 aa13.68□□□□□ -0.22
LTBP3-208ENST00000527339 SPDEFO95238 335 aa13.68□□□□□ -0.22
LTBP3-208ENST00000527339 RCVRNP35243 200 aa13.68□□□□□ -0.22
LTBP3-208ENST00000527339 RPS16P62249 146 aaKnown RBP13.68□□□□□ -0.22
LTBP3-208ENST00000527339 MSMO1Q15800 293 aa13.68□□□□□ -0.22
LTBP3-208ENST00000527339 RTL8BQ17RB0 113 aa13.68□□□□□ -0.22
LTBP3-208ENST00000527339 OVCH2Q7RTZ1 564 aa13.68□□□□□ -0.22
LTBP3-208ENST00000527339 STPG2Q8N412 459 aa13.68□□□□□ -0.22
LTBP3-208ENST00000527339 OR4X2Q8NGF9 303 aa13.68□□□□□ -0.22
LTBP3-208ENST00000527339 OR5H2Q8NGV7 314 aa13.68□□□□□ -0.22
LTBP3-208ENST00000527339 DDB2Q92466 427 aa13.68□□□□□ -0.22
LTBP3-208ENST00000527339 NOL4LQ96MY1 436 aaPredicted RBP13.68□□□□□ -0.22
LTBP3-208ENST00000527339 SLIRPQ9GZT3 109 aaKnown RBP13.68□□□□□ -0.22
LTBP3-208ENST00000527339 RBM38Q9H0Z9 239 aaKnown RBP13.68□□□□□ -0.22
LTBP3-208ENST00000527339 LINC00473A8K010 186 aa13.67□□□□□ -0.22
LTBP3-208ENST00000527339 ZNF701M0R085 212 aaPredicted RBP13.67□□□□□ -0.22
LTBP3-208ENST00000527339 IGLV2-14P01704 120 aa13.67□□□□□ -0.22
LTBP3-208ENST00000527339 RFX2P48378 723 aa13.67□□□□□ -0.22
LTBP3-208ENST00000527339 SLC35B1P78383 322 aa13.67□□□□□ -0.22
LTBP3-208ENST00000527339 CD83Q01151 205 aa13.67□□□□□ -0.22
LTBP3-208ENST00000527339 DYRK1AQ13627 763 aa13.67□□□□□ -0.22
LTBP3-208ENST00000527339 PLGLAQ15195 96 aa13.67□□□□□ -0.22
LTBP3-208ENST00000527339 HIST2H2BDQ6DRA6 164 aa13.67□□□□□ -0.22
LTBP3-208ENST00000527339 LIN54Q6MZP7 749 aa13.67□□□□□ -0.22
LTBP3-208ENST00000527339 LYSMD2Q8IV50 215 aa13.67□□□□□ -0.22
LTBP3-208ENST00000527339 BVESQ8NE79 360 aa13.67□□□□□ -0.22
LTBP3-208ENST00000527339 SECTM1Q8WVN6 248 aa13.67□□□□□ -0.22
LTBP3-208ENST00000527339 CITED2Q99967 270 aaPredicted RBP13.67□□□□□ -0.22
LTBP3-208ENST00000527339 GON7Q9BXV9 100 aa13.67□□□□□ -0.22
LTBP3-208ENST00000527339 C6orf62Q9GZU0 229 aaPredicted RBP13.67□□□□□ -0.22
LTBP3-208ENST00000527339 FBXL15Q9H469 300 aa13.67□□□□□ -0.22
LTBP3-208ENST00000527339 RSL24D1Q9UHA3 163 aaKnown RBP13.67□□□□□ -0.22
LTBP3-208ENST00000527339 LINC00527Q9UJ94 153 aa13.67□□□□□ -0.22
LTBP3-208ENST00000527339 ZNF580Q9UK33 172 aa13.67□□□□□ -0.22
LTBP3-208ENST00000527339 NOTCH3Q9UM47 2321 aa13.66□□□□□ -0.22
LTBP3-208ENST00000527339 PMP2P02689 132 aa13.66□□□□□ -0.22
LTBP3-208ENST00000527339 OPN1MWP04001 364 aa13.66□□□□□ -0.22
LTBP3-208ENST00000527339 IGF1P05019 195 aa13.66□□□□□ -0.22
LTBP3-208ENST00000527339 OPN1MW2P0DN77 364 aa13.66□□□□□ -0.22
LTBP3-208ENST00000527339 OPN1MW3P0DN78 364 aa13.66□□□□□ -0.22
LTBP3-208ENST00000527339 LGALS7P47929 136 aa13.66□□□□□ -0.22
LTBP3-208ENST00000527339 PSG5Q15238 335 aa13.66□□□□□ -0.22
LTBP3-208ENST00000527339 TMEM177Q53S58 311 aa13.66□□□□□ -0.22
LTBP3-208ENST00000527339 C10orf99Q6UWK7 81 aa13.66□□□□□ -0.22
LTBP3-208ENST00000527339 DHRS11Q6UWP2 260 aa13.66□□□□□ -0.22
LTBP3-208ENST00000527339 KCTD9Q7L273 389 aa13.66□□□□□ -0.22
LTBP3-208ENST00000527339 NDUFA11Q86Y39 141 aa13.66□□□□□ -0.22
LTBP3-208ENST00000527339 HARBI1Q96MB7 349 aa13.66□□□□□ -0.22
LTBP3-208ENST00000527339 ABHD1Q96SE0 405 aa13.66□□□□□ -0.22
LTBP3-208ENST00000527339 HSD17B10Q99714 261 aaKnown RBP13.66□□□□□ -0.22
LTBP3-208ENST00000527339 PRELID3BQ9Y3B1 194 aa13.66□□□□□ -0.22
LTBP3-208ENST00000527339 IGHV7-81A0A0B4J1V7 117 aa13.65□□□□□ -0.22
LTBP3-208ENST00000527339 CSF1P09603 554 aa13.65□□□□□ -0.22
LTBP3-208ENST00000527339 HLA-DMAP28067 261 aa13.65□□□□□ -0.22
LTBP3-208ENST00000527339 HRH1P35367 487 aa13.65□□□□□ -0.22
LTBP3-208ENST00000527339 FXYD4P59646 89 aa13.65□□□□□ -0.22
LTBP3-208ENST00000527339 HERV-K104P61576 105 aa13.65□□□□□ -0.22
LTBP3-208ENST00000527339 EIF4EBP1Q13541 118 aaPredicted RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms