RNA–Protein interactions for RNA: ENST00000527154.5

CHMP4A-203, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-203ENST00000527154 RPS16P62249 146 aaKnown RBP12.03□□□□□ -0.48
CHMP4A-203ENST00000527154 RIPK1Q13546 671 aa12.03□□□□□ -0.48
CHMP4A-203ENST00000527154 CCDC58Q4VC31 144 aa12.03□□□□□ -0.48
CHMP4A-203ENST00000527154 FAM209BQ5JX69 171 aa12.03□□□□□ -0.48
CHMP4A-203ENST00000527154 C1orf146Q5VVC0 180 aa12.03□□□□□ -0.48
CHMP4A-203ENST00000527154 GLIPR1L1Q6UWM5 242 aa12.03□□□□□ -0.48
CHMP4A-203ENST00000527154 KIR2DL5AQ8N109 375 aa12.03□□□□□ -0.48
CHMP4A-203ENST00000527154 SVOPQ8N4V2 548 aa12.03□□□□□ -0.48
CHMP4A-203ENST00000527154 KIR2DL5BQ8NHK3 375 aa12.03□□□□□ -0.48
CHMP4A-203ENST00000527154 TMEM213A2RRL7 107 aa12.02□□□□□ -0.49
CHMP4A-203ENST00000527154 SAC3D1A6NKF1 404 aa12.02□□□□□ -0.49
CHMP4A-203ENST00000527154 A8MWP6 167 aa12.02□□□□□ -0.49
CHMP4A-203ENST00000527154 MGMTP16455 207 aa12.02□□□□□ -0.49
CHMP4A-203ENST00000527154 GABRB1P18505 474 aa12.02□□□□□ -0.49
CHMP4A-203ENST00000527154 GBX2P52951 348 aaPredicted RBP12.02□□□□□ -0.49
CHMP4A-203ENST00000527154 APOC4P55056 127 aa12.02□□□□□ -0.49
CHMP4A-203ENST00000527154 EXOSC2Q13868 293 aaKnown RBP12.02□□□□□ -0.49
CHMP4A-203ENST00000527154 DEFB135Q30KP9 77 aa12.02□□□□□ -0.49
CHMP4A-203ENST00000527154 XAF1Q6GPH4 301 aa12.02□□□□□ -0.49
CHMP4A-203ENST00000527154 GPHB5Q86YW7 130 aa12.02□□□□□ -0.49
CHMP4A-203ENST00000527154 CDH26Q8IXH8 852 aa12.02□□□□□ -0.49
CHMP4A-203ENST00000527154 DRAXINQ8NBI3 349 aaPredicted RBP12.02□□□□□ -0.49
CHMP4A-203ENST00000527154 OR52B4Q8NGK2 314 aa12.02□□□□□ -0.49
CHMP4A-203ENST00000527154 FAM46BQ96A09 425 aa12.02□□□□□ -0.49
CHMP4A-203ENST00000527154 ORAI1Q96D31 301 aa12.02□□□□□ -0.49
CHMP4A-203ENST00000527154 CENPNQ96H22 339 aaPredicted RBP12.02□□□□□ -0.49
CHMP4A-203ENST00000527154 COA4Q9NYJ1 87 aa12.02□□□□□ -0.49
CHMP4A-203ENST00000527154 MLXQ9UH92 298 aa12.02□□□□□ -0.49
CHMP4A-203ENST00000527154 TRBV5-5A0A0J9YX44 114 aa12.01□□□□□ -0.49
CHMP4A-203ENST00000527154 SNTNA6NMZ2 147 aa12.01□□□□□ -0.49
CHMP4A-203ENST00000527154 OR9G9P0C7N8 305 aa12.01□□□□□ -0.49
CHMP4A-203ENST00000527154 RHOGP84095 191 aa12.01□□□□□ -0.49
CHMP4A-203ENST00000527154 ANKRD55Q3KP44 614 aa12.01□□□□□ -0.49
CHMP4A-203ENST00000527154 ZNF57Q68EA5 555 aaPredicted RBP12.01□□□□□ -0.49
CHMP4A-203ENST00000527154 RPL22L1Q6P5R6 122 aaKnown RBP12.01□□□□□ -0.49
CHMP4A-203ENST00000527154 GVQW1Q8N7I0 195 aa12.01□□□□□ -0.49
CHMP4A-203ENST00000527154 MUL1Q969V5 352 aa12.01□□□□□ -0.49
CHMP4A-203ENST00000527154 SELENOIQ9C0D9 397 aa12.01□□□□□ -0.49
CHMP4A-203ENST00000527154 C11orf54Q9H0W9 315 aaPredicted RBP12.01□□□□□ -0.49
CHMP4A-203ENST00000527154 BANF2Q9H503 90 aa12.01□□□□□ -0.49
CHMP4A-203ENST00000527154 MRPS18AQ9NVS2 196 aaKnown RBP12.01□□□□□ -0.49
CHMP4A-203ENST00000527154 ABRACLQ9P1F3 81 aa12.01□□□□□ -0.49
CHMP4A-203ENST00000527154 TRAV8-7A0A075B6U6 113 aa12□□□□□ -0.49
CHMP4A-203ENST00000527154 BAG2O95816 211 aa12□□□□□ -0.49
CHMP4A-203ENST00000527154 TM4SF20Q53R12 229 aa12□□□□□ -0.49
CHMP4A-203ENST00000527154 IL1F10Q8WWZ1 152 aa12□□□□□ -0.49
CHMP4A-203ENST00000527154 CACNG8Q8WXS5 425 aa12□□□□□ -0.49
CHMP4A-203ENST00000527154 ORC6Q9Y5N6 252 aa12□□□□□ -0.49
CHMP4A-203ENST00000527154 LRP1BQ9NZR2 4599 aa11.99□□□□□ -0.49
CHMP4A-203ENST00000527154 TRBV6-6A0A0A6YYG2 114 aa11.99□□□□□ -0.49
CHMP4A-203ENST00000527154 TRAV25A0A0B4J276 109 aa11.99□□□□□ -0.49
CHMP4A-203ENST00000527154 LIMS3P0CW19 117 aa11.99□□□□□ -0.49
CHMP4A-203ENST00000527154 LIMS4P0CW20 117 aa11.99□□□□□ -0.49
CHMP4A-203ENST00000527154 C8orf88P0DMB2 117 aa11.99□□□□□ -0.49
CHMP4A-203ENST00000527154 ATP5G2Q06055 141 aa11.99□□□□□ -0.49
CHMP4A-203ENST00000527154 EDARADDQ8WWZ3 215 aa11.99□□□□□ -0.49
CHMP4A-203ENST00000527154 AASSQ9UDR5 926 aa11.99□□□□□ -0.49
CHMP4A-203ENST00000527154 APLNQ9ULZ1 77 aa11.99□□□□□ -0.49
CHMP4A-203ENST00000527154 SRRM4A7MD48 611 aaKnown RBP11.98□□□□□ -0.49
CHMP4A-203ENST00000527154 OGG1O15527 345 aa11.98□□□□□ -0.49
CHMP4A-203ENST00000527154 GGCTO75223 188 aaKnown RBP11.98□□□□□ -0.49
CHMP4A-203ENST00000527154 APOA2P02652 100 aa11.98□□□□□ -0.49
CHMP4A-203ENST00000527154 ALPLP05186 524 aa11.98□□□□□ -0.49
CHMP4A-203ENST00000527154 RPS11P62280 158 aaKnown RBP eCLIP11.98□□□□□ -0.49
CHMP4A-203ENST00000527154 KLK9Q2XQG4 91 aa11.98□□□□□ -0.49
CHMP4A-203ENST00000527154 ZIK1Q3SY52 487 aaPredicted RBP11.98□□□□□ -0.49
CHMP4A-203ENST00000527154 NECAP1Q8NC96 275 aa11.98□□□□□ -0.49
CHMP4A-203ENST00000527154 THRSPQ92748 146 aa11.98□□□□□ -0.49
CHMP4A-203ENST00000527154 C11orf68Q9H3H3 251 aaKnown RBP11.98□□□□□ -0.49
CHMP4A-203ENST00000527154 KLK9Q9UKQ9 250 aa11.98□□□□□ -0.49
CHMP4A-203ENST00000527154 TRBV5-7A0A0A0MS05 114 aa11.97□□□□□ -0.49
CHMP4A-203ENST00000527154 PPP5D1E7EU14 171 aa11.97□□□□□ -0.49
CHMP4A-203ENST00000527154 EI24O14681 340 aa11.97□□□□□ -0.49
CHMP4A-203ENST00000527154 TUSC2O75896 110 aa11.97□□□□□ -0.49
CHMP4A-203ENST00000527154 ATP5HO75947 161 aa11.97□□□□□ -0.49
CHMP4A-203ENST00000527154 OR2C1O95371 312 aa11.97□□□□□ -0.49
CHMP4A-203ENST00000527154 HLA-AP01891 365 aaKnown RBP11.97□□□□□ -0.49
CHMP4A-203ENST00000527154 RASSF2P50749 326 aa11.97□□□□□ -0.49
CHMP4A-203ENST00000527154 TMEM177Q53S58 311 aa11.97□□□□□ -0.49
CHMP4A-203ENST00000527154 AWAT2Q6E213 333 aa11.97□□□□□ -0.49
CHMP4A-203ENST00000527154 MOB1BQ7L9L4 216 aa11.97□□□□□ -0.49
CHMP4A-203ENST00000527154 TTC9CQ8N5M4 171 aa11.97□□□□□ -0.49
CHMP4A-203ENST00000527154 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.97□□□□□ -0.49
CHMP4A-203ENST00000527154 OR13C5Q8NGS8 318 aa11.97□□□□□ -0.49
CHMP4A-203ENST00000527154 SRSF12Q8WXF0 261 aaKnown RBP11.97□□□□□ -0.49
CHMP4A-203ENST00000527154 SMIM19Q96E16 107 aa11.97□□□□□ -0.49
CHMP4A-203ENST00000527154 MFFQ9GZY8 342 aa11.97□□□□□ -0.49
CHMP4A-203ENST00000527154 SLC35D1Q9NTN3 355 aa11.97□□□□□ -0.49
CHMP4A-203ENST00000527154 OR1A1Q9P1Q5 309 aa11.97□□□□□ -0.49
CHMP4A-203ENST00000527154 FBXL7Q9UJT9 491 aa11.97□□□□□ -0.49
CHMP4A-203ENST00000527154 RTL8CO15255 209 aa11.96□□□□□ -0.49
CHMP4A-203ENST00000527154 PRH1P02810 166 aa11.96□□□□□ -0.49
CHMP4A-203ENST00000527154 CTRB1P17538 263 aa11.96□□□□□ -0.49
CHMP4A-203ENST00000527154 MAP2K4P45985 399 aa11.96□□□□□ -0.49
CHMP4A-203ENST00000527154 PRSS8Q16651 343 aa11.96□□□□□ -0.49
CHMP4A-203ENST00000527154 C15orf32Q32M92 178 aa11.96□□□□□ -0.49
CHMP4A-203ENST00000527154 CTRB2Q6GPI1 263 aa11.96□□□□□ -0.49
CHMP4A-203ENST00000527154 UXS1Q8NBZ7 420 aa11.96□□□□□ -0.49
CHMP4A-203ENST00000527154 OR52I1Q8NGK6 324 aa11.96□□□□□ -0.49
CHMP4A-203ENST00000527154 C2CD4CQ8TF44 421 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms