RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 OR5H8P0DN80 308 aa5.07□□□□□ -1.6
CD44-221ENST00000526000 IGHV4-30-4P0DP06 118 aa5.07□□□□□ -1.6
CD44-221ENST00000526000 PPP1CCP36873 323 aaKnown RBP5.07□□□□□ -1.6
CD44-221ENST00000526000 PITPNAQ00169 270 aa5.07□□□□□ -1.6
CD44-221ENST00000526000 LSAMPQ13449 338 aa5.07□□□□□ -1.6
CD44-221ENST00000526000 SPCS2Q15005 226 aa5.07□□□□□ -1.6
CD44-221ENST00000526000 PLGLAQ15195 96 aa5.07□□□□□ -1.6
CD44-221ENST00000526000 TMEM30BQ3MIR4 351 aa5.07□□□□□ -1.6
CD44-221ENST00000526000 TRAT1Q6PIZ9 186 aa5.07□□□□□ -1.6
CD44-221ENST00000526000 GLDNQ6ZMI3 551 aaPredicted RBP5.07□□□□□ -1.6
CD44-221ENST00000526000 ZNF497Q6ZNH5 498 aa5.07□□□□□ -1.6
CD44-221ENST00000526000 MOB1BQ7L9L4 216 aa5.07□□□□□ -1.6
CD44-221ENST00000526000 Q8N1Y9 231 aa5.07□□□□□ -1.6
CD44-221ENST00000526000 GAPTQ8N292 157 aa5.07□□□□□ -1.6
CD44-221ENST00000526000 ZNF439Q8NDP4 499 aa5.07□□□□□ -1.6
CD44-221ENST00000526000 OR8H1Q8NGG4 311 aa5.07□□□□□ -1.6
CD44-221ENST00000526000 OR52M1Q8NGK5 317 aa5.07□□□□□ -1.6
CD44-221ENST00000526000 OR10R2Q8NGX6 335 aa5.07□□□□□ -1.6
CD44-221ENST00000526000 LGALS14Q8TCE9 139 aa5.07□□□□□ -1.6
CD44-221ENST00000526000 S100A16Q96FQ6 103 aaKnown RBP5.07□□□□□ -1.6
CD44-221ENST00000526000 NABP2Q9BQ15 211 aa5.07□□□□□ -1.6
CD44-221ENST00000526000 FAM103A1Q9BTL3 118 aaKnown RBP5.07□□□□□ -1.6
CD44-221ENST00000526000 NXF2Q9GZY0 626 aaKnown RBP5.07□□□□□ -1.6
CD44-221ENST00000526000 TOLLIPQ9H0E2 274 aa5.07□□□□□ -1.6
CD44-221ENST00000526000 LPAR5Q9H1C0 372 aa5.07□□□□□ -1.6
CD44-221ENST00000526000 GHITMQ9H3K2 345 aa5.07□□□□□ -1.6
CD44-221ENST00000526000 TAF9BQ9HBM6 251 aa5.07□□□□□ -1.6
CD44-221ENST00000526000 RETNQ9HD89 108 aa5.07□□□□□ -1.6
CD44-221ENST00000526000 OR2S2Q9NQN1 319 aa5.07□□□□□ -1.6
CD44-221ENST00000526000 ZNF355PQ9NSJ1 428 aa5.07□□□□□ -1.6
CD44-221ENST00000526000 PLEKHJ1Q9NW61 149 aa5.07□□□□□ -1.6
CD44-221ENST00000526000 KIAA1456Q9P272 454 aa5.07□□□□□ -1.6
CD44-221ENST00000526000 GAB2Q9UQC2 676 aa5.07□□□□□ -1.6
CD44-221ENST00000526000 STAB2Q8WWQ8 2551 aa5.06□□□□□ -1.6
CD44-221ENST00000526000 TRBV6-6A0A0A6YYG2 114 aa5.06□□□□□ -1.6
CD44-221ENST00000526000 FOXI3A8MTJ6 420 aaPredicted RBP5.06□□□□□ -1.6
CD44-221ENST00000526000 RAB27BO00194 218 aa5.06□□□□□ -1.6
CD44-221ENST00000526000 NBR2O15453 112 aa5.06□□□□□ -1.6
CD44-221ENST00000526000 XRCC3O43542 346 aa5.06□□□□□ -1.6
CD44-221ENST00000526000 LANCL1O43813 399 aa5.06□□□□□ -1.6
CD44-221ENST00000526000 DIRAS3O95661 229 aa5.06□□□□□ -1.6
CD44-221ENST00000526000 IGLV1-40P01703 118 aa5.06□□□□□ -1.6
CD44-221ENST00000526000 HIST1H1DP16402 221 aaKnown RBP5.06□□□□□ -1.6
CD44-221ENST00000526000 PTBP1P26599 531 aaKnown RBP eCLIP5.06□□□□□ -1.6
CD44-221ENST00000526000 S100A5P33763 92 aa5.06□□□□□ -1.6
CD44-221ENST00000526000 TGFBR1P36897 503 aa5.06□□□□□ -1.6
CD44-221ENST00000526000 TALDO1P37837 337 aa5.06□□□□□ -1.6
CD44-221ENST00000526000 CLDN12P56749 244 aa5.06□□□□□ -1.6
CD44-221ENST00000526000 LINC00205P59089 165 aa5.06□□□□□ -1.6
CD44-221ENST00000526000 CX3CL1P78423 397 aa5.06□□□□□ -1.6
CD44-221ENST00000526000 MRPS10P82664 201 aaKnown RBP5.06□□□□□ -1.6
CD44-221ENST00000526000 MRPS15P82914 257 aaKnown RBP5.06□□□□□ -1.6
CD44-221ENST00000526000 NDPQ00604 133 aa5.06□□□□□ -1.6
CD44-221ENST00000526000 DEFA5Q01523 94 aa5.06□□□□□ -1.6
CD44-221ENST00000526000 C5orf64Q2M2E5 130 aa5.06□□□□□ -1.6
CD44-221ENST00000526000 MORN2Q502X0 79 aa5.06□□□□□ -1.6
CD44-221ENST00000526000 C6orf183Q5T699 404 aa5.06□□□□□ -1.6
CD44-221ENST00000526000 ACSM6Q6P461 480 aa5.06□□□□□ -1.6
CD44-221ENST00000526000 UNQ5815/PRO19632Q6UWF5 114 aa5.06□□□□□ -1.6
CD44-221ENST00000526000 SAMD12Q8N8I0 201 aa5.06□□□□□ -1.6
CD44-221ENST00000526000 OR5T1Q8NG75 326 aa5.06□□□□□ -1.6
CD44-221ENST00000526000 OR6Q1Q8NGQ2 317 aa5.06□□□□□ -1.6
CD44-221ENST00000526000 MYOZ3Q8TDC0 251 aa5.06□□□□□ -1.6
CD44-221ENST00000526000 RAB3CQ96E17 227 aa5.06□□□□□ -1.6
CD44-221ENST00000526000 FAM110AQ9BQ89 295 aa5.06□□□□□ -1.6
CD44-221ENST00000526000 SLIRPQ9GZT3 109 aaKnown RBP5.06□□□□□ -1.6
CD44-221ENST00000526000 TUBA4BQ9H853 241 aa5.06□□□□□ -1.6
CD44-221ENST00000526000 COMMD3Q9UBI1 195 aa5.06□□□□□ -1.6
CD44-221ENST00000526000 SELENOKQ9Y6D0 94 aa5.06□□□□□ -1.6
CD44-221ENST00000526000 HUWE1Q7Z6Z7 4374 aaKnown RBP5.06□□□□□ -1.6
CD44-221ENST00000526000 SULT1C2O00338 296 aa5.05□□□□□ -1.6
CD44-221ENST00000526000 ST8SIA5O15466 376 aa5.05□□□□□ -1.6
CD44-221ENST00000526000 HSPB1P04792 205 aaKnown RBP5.05□□□□□ -1.6
CD44-221ENST00000526000 CD3GP09693 182 aa5.05□□□□□ -1.6
CD44-221ENST00000526000 EGR2P11161 476 aaPredicted RBP5.05□□□□□ -1.6
CD44-221ENST00000526000 DTYMKP23919 212 aa5.05□□□□□ -1.6
CD44-221ENST00000526000 CBX5P45973 191 aa5.05□□□□□ -1.6
CD44-221ENST00000526000 VEGFCP49767 419 aa5.05□□□□□ -1.6
CD44-221ENST00000526000 TMEM50BP56557 158 aa5.05□□□□□ -1.6
CD44-221ENST00000526000 TPPP2P59282 170 aa5.05□□□□□ -1.6
CD44-221ENST00000526000 RUNX1Q01196 453 aa5.05□□□□□ -1.6
CD44-221ENST00000526000 HAGHQ16775 308 aa5.05□□□□□ -1.6
CD44-221ENST00000526000 Q3ZCU0 254 aa5.05□□□□□ -1.6
CD44-221ENST00000526000 RPL39P5Q59GN2 51 aa5.05□□□□□ -1.6
CD44-221ENST00000526000 SIGIRRQ6IA17 410 aa5.05□□□□□ -1.6
CD44-221ENST00000526000 OR10K2Q6IF99 312 aa5.05□□□□□ -1.6
CD44-221ENST00000526000 FAM131AQ6UXB0 335 aa5.05□□□□□ -1.6
CD44-221ENST00000526000 Q6ZS49 121 aa5.05□□□□□ -1.6
CD44-221ENST00000526000 PPP1R27Q86WC6 154 aa5.05□□□□□ -1.6
CD44-221ENST00000526000 SGPP2Q8IWX5 399 aa5.05□□□□□ -1.6
CD44-221ENST00000526000 ODF3L1Q8IXM7 274 aa5.05□□□□□ -1.6
CD44-221ENST00000526000 MINDY2Q8NBR6 621 aa5.05□□□□□ -1.6
CD44-221ENST00000526000 LFNGQ8NES3 379 aa5.05□□□□□ -1.6
CD44-221ENST00000526000 MCFD2Q8NI22 146 aa5.05□□□□□ -1.6
CD44-221ENST00000526000 SETD6Q8TBK2 473 aa5.05□□□□□ -1.6
CD44-221ENST00000526000 SLC25A38Q96DW6 304 aa5.05□□□□□ -1.6
CD44-221ENST00000526000 ABHD14BQ96IU4 210 aa5.05□□□□□ -1.6
CD44-221ENST00000526000 TM2D3Q9BRN9 247 aa5.05□□□□□ -1.6
CD44-221ENST00000526000 KRTAP17-1Q9BYP8 105 aa5.05□□□□□ -1.6
CD44-221ENST00000526000 ATG5Q9H1Y0 275 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms