RNA–Protein interactions for RNA: ENST00000525367.1

USP47-206, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 434 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-206ENST00000525367 C8orf4Q9NR00 106 aa3.11□□□□□ -1.91
USP47-206ENST00000525367 MRPS16Q9Y3D3 137 aaKnown RBP3.11□□□□□ -1.91
USP47-206ENST00000525367 TRAPPC1Q9Y5R8 145 aa3.11□□□□□ -1.91
USP47-206ENST00000525367 IGSF9BQ9UPX0 1349 aa3.11□□□□□ -1.91
USP47-206ENST00000525367 GRIN2BQ13224 1484 aa3.1□□□□□ -1.91
USP47-206ENST00000525367 MEGF6O75095 1541 aa3.1□□□□□ -1.91
USP47-206ENST00000525367 hADV38S2A0JD32 116 aa3.1□□□□□ -1.91
USP47-206ENST00000525367 FSTL3O95633 263 aa3.1□□□□□ -1.91
USP47-206ENST00000525367 LHBP01229 141 aa3.1□□□□□ -1.91
USP47-206ENST00000525367 IFNA21P01568 189 aa3.1□□□□□ -1.91
USP47-206ENST00000525367 HLA-DRB1P01911 266 aa3.1□□□□□ -1.91
USP47-206ENST00000525367 CRYGDP07320 174 aa3.1□□□□□ -1.91
USP47-206ENST00000525367 CD7P09564 240 aa3.1□□□□□ -1.91
USP47-206ENST00000525367 IFI30P13284 250 aa3.1□□□□□ -1.91
USP47-206ENST00000525367 ATP6V0CP27449 155 aa3.1□□□□□ -1.91
USP47-206ENST00000525367 NOVP48745 357 aa3.1□□□□□ -1.91
USP47-206ENST00000525367 TCTAP57738 103 aa3.1□□□□□ -1.91
USP47-206ENST00000525367 SNRPD2P62316 118 aaKnown RBP3.1□□□□□ -1.91
USP47-206ENST00000525367 TFAMQ00059 246 aaKnown RBP3.1□□□□□ -1.91
USP47-206ENST00000525367 GNA12Q03113 381 aa3.1□□□□□ -1.91
USP47-206ENST00000525367 ALX1Q15699 326 aa3.1□□□□□ -1.91
USP47-206ENST00000525367 KRTAP5-2Q701N4 177 aa3.1□□□□□ -1.91
USP47-206ENST00000525367 DAZ4Q86SG3 579 aaKnown RBP3.1□□□□□ -1.91
USP47-206ENST00000525367 SGPP2Q8IWX5 399 aa3.1□□□□□ -1.91
USP47-206ENST00000525367 C1orf174Q8IYL3 243 aa3.1□□□□□ -1.91
USP47-206ENST00000525367 ZFP62Q8NB50 900 aaPredicted RBP3.1□□□□□ -1.91
USP47-206ENST00000525367 UBALD1Q8TB05 177 aa3.1□□□□□ -1.91
USP47-206ENST00000525367 GNPDA2Q8TDQ7 276 aa3.1□□□□□ -1.91
USP47-206ENST00000525367 FRZBQ92765 325 aa3.1□□□□□ -1.91
USP47-206ENST00000525367 GNPNAT1Q96EK6 184 aaPredicted RBP3.1□□□□□ -1.91
USP47-206ENST00000525367 CCL13Q99616 98 aa3.1□□□□□ -1.91
USP47-206ENST00000525367 B9D2Q9BPU9 175 aa3.1□□□□□ -1.91
USP47-206ENST00000525367 COMMD5Q9GZQ3 224 aa3.1□□□□□ -1.91
USP47-206ENST00000525367 GPR84Q9NQS5 396 aa3.1□□□□□ -1.91
USP47-206ENST00000525367 BIN3Q9NQY0 253 aa3.1□□□□□ -1.91
USP47-206ENST00000525367 DAZ1Q9NQZ3 744 aaKnown RBP3.1□□□□□ -1.91
USP47-206ENST00000525367 BATF3Q9NR55 127 aa3.1□□□□□ -1.91
USP47-206ENST00000525367 PRTFDC1Q9NRG1 225 aa3.1□□□□□ -1.91
USP47-206ENST00000525367 C19orf12Q9NSK7 152 aa3.1□□□□□ -1.91
USP47-206ENST00000525367 CMTM6Q9NX76 183 aa3.1□□□□□ -1.91
USP47-206ENST00000525367 RSL24D1Q9UHA3 163 aaKnown RBP3.1□□□□□ -1.91
USP47-206ENST00000525367 AK3Q9UIJ7 227 aa3.1□□□□□ -1.91
USP47-206ENST00000525367 PHLDA3Q9Y5J5 127 aa3.1□□□□□ -1.91
USP47-206ENST00000525367 RFNGQ9Y644 331 aa3.1□□□□□ -1.91
USP47-206ENST00000525367 MIA3Q5JRA6 1907 aa3.09□□□□□ -1.91
USP47-206ENST00000525367 BET1O15155 118 aa3.09□□□□□ -1.91
USP47-206ENST00000525367 IGHG2P01859 326 aa3.09□□□□□ -1.91
USP47-206ENST00000525367 IGHMP01871 453 aa3.09□□□□□ -1.91
USP47-206ENST00000525367 SULT1A3P0DMM9 295 aa3.09□□□□□ -1.91
USP47-206ENST00000525367 SULT1A4P0DMN0 295 aa3.09□□□□□ -1.91
USP47-206ENST00000525367 DAPP51397 102 aa3.09□□□□□ -1.91
USP47-206ENST00000525367 TAS2R45P59539 299 aa3.09□□□□□ -1.91
USP47-206ENST00000525367 HSPE1P61604 102 aaKnown RBP3.09□□□□□ -1.91
USP47-206ENST00000525367 BSPH1Q075Z2 132 aa3.09□□□□□ -1.91
USP47-206ENST00000525367 IL15RAQ13261 267 aa3.09□□□□□ -1.91
USP47-206ENST00000525367 C2orf83Q53S99 150 aa3.09□□□□□ -1.91
USP47-206ENST00000525367 SMARCD3Q6STE5 483 aa3.09□□□□□ -1.91
USP47-206ENST00000525367 UNQ9165/PRO28630Q6UXU0 137 aa3.09□□□□□ -1.91
USP47-206ENST00000525367 SAXO1Q8IYX7 474 aa3.09□□□□□ -1.91
USP47-206ENST00000525367 ZNF615Q8N8J6 731 aa3.09□□□□□ -1.91
USP47-206ENST00000525367 OR52L1Q8NGH7 329 aa3.09□□□□□ -1.91
USP47-206ENST00000525367 CT55Q8WUE5 264 aa3.09□□□□□ -1.91
USP47-206ENST00000525367 RTN4IP1Q8WWV3 396 aaPredicted RBP3.09□□□□□ -1.91
USP47-206ENST00000525367 ROPN1LQ96C74 230 aa3.09□□□□□ -1.91
USP47-206ENST00000525367 LINC00477Q96M19 166 aa3.09□□□□□ -1.91
USP47-206ENST00000525367 DDA1Q9BW61 102 aa3.09□□□□□ -1.91
USP47-206ENST00000525367 C1QTNF6Q9BXI9 259 aa3.09□□□□□ -1.91
USP47-206ENST00000525367 C14orf105Q9NVL8 296 aa3.09□□□□□ -1.91
USP47-206ENST00000525367 SMPXQ9UHP9 88 aa3.09□□□□□ -1.91
USP47-206ENST00000525367 ZNF230Q9UIE0 474 aaPredicted RBP3.09□□□□□ -1.91
USP47-206ENST00000525367 PYCARDQ9ULZ3 195 aa3.09□□□□□ -1.91
USP47-206ENST00000525367 UTP11Q9Y3A2 253 aaKnown RBP3.09□□□□□ -1.91
USP47-206ENST00000525367 PIK3C2GO75747 1445 aa3.09□□□□□ -1.92
USP47-206ENST00000525367 WRNQ14191 1432 aaPredicted RBP eCLIP3.09□□□□□ -1.92
USP47-206ENST00000525367 TSPOAP1O95153 1857 aa3.08□□□□□ -1.92
USP47-206ENST00000525367 FAM236DA0A1B0GTK5 79 aa3.08□□□□□ -1.92
USP47-206ENST00000525367 ZNF850A8MQ14 1090 aa3.08□□□□□ -1.92
USP47-206ENST00000525367 PPP5D1E7EU14 171 aa3.08□□□□□ -1.92
USP47-206ENST00000525367 CRYZL1O95825 349 aa3.08□□□□□ -1.92
USP47-206ENST00000525367 FAM236CP0DP71 79 aa3.08□□□□□ -1.92
USP47-206ENST00000525367 ZNF32P17041 273 aa3.08□□□□□ -1.92
USP47-206ENST00000525367 MDKP21741 143 aaPredicted RBP3.08□□□□□ -1.92
USP47-206ENST00000525367 NPY1RP25929 384 aa3.08□□□□□ -1.92
USP47-206ENST00000525367 FGF12P61328 243 aa3.08□□□□□ -1.92
USP47-206ENST00000525367 GNG3P63215 75 aa3.08□□□□□ -1.92
USP47-206ENST00000525367 RUNX1Q01196 453 aa3.08□□□□□ -1.92
USP47-206ENST00000525367 TNFRSF9Q07011 255 aa3.08□□□□□ -1.92
USP47-206ENST00000525367 ZNF816Q0VGE8 651 aaPredicted RBP3.08□□□□□ -1.92
USP47-206ENST00000525367 FUT5Q11128 374 aa3.08□□□□□ -1.92
USP47-206ENST00000525367 KCNJ8Q15842 424 aa3.08□□□□□ -1.92
USP47-206ENST00000525367 ZFP2Q6ZN57 461 aa3.08□□□□□ -1.92
USP47-206ENST00000525367 SCXQ7RTU7 201 aa3.08□□□□□ -1.92
USP47-206ENST00000525367 UMODL1-AS1Q8N2C9 162 aa3.08□□□□□ -1.92
USP47-206ENST00000525367 SLC22A24Q8N4F4 322 aa3.08□□□□□ -1.92
USP47-206ENST00000525367 TMEM105Q8N8V8 129 aa3.08□□□□□ -1.92
USP47-206ENST00000525367 GDPD1Q8N9F7 314 aa3.08□□□□□ -1.92
USP47-206ENST00000525367 OR11G2Q8NGC1 345 aa3.08□□□□□ -1.92
USP47-206ENST00000525367 OR8B12Q8NGG6 310 aa3.08□□□□□ -1.92
USP47-206ENST00000525367 TMEM147Q9BVK8 224 aa3.08□□□□□ -1.92
USP47-206ENST00000525367 NKX6-2Q9C056 277 aaPredicted RBP3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms