RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 RBMX2Q9Y388 322 aaKnown RBP3.66□□□□□ -1.82
CHMP4A-202ENST00000524955 A3GALT2U3KPV4 340 aa3.66□□□□□ -1.82
CHMP4A-202ENST00000524955 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.66□□□□□ -1.82
CHMP4A-202ENST00000524955 TLN2Q9Y4G6 2542 aa3.66□□□□□ -1.82
CHMP4A-202ENST00000524955 NSD1Q96L73 2696 aaPredicted RBP3.66□□□□□ -1.82
CHMP4A-202ENST00000524955 NIPBLQ6KC79 2804 aaeCLIP3.65□□□□□ -1.82
CHMP4A-202ENST00000524955 MTORP42345 2549 aa3.65□□□□□ -1.83
CHMP4A-202ENST00000524955 A0A1W2PRX2 142 aa3.65□□□□□ -1.83
CHMP4A-202ENST00000524955 ANKRD20A5PA0PJZ0 165 aa3.65□□□□□ -1.83
CHMP4A-202ENST00000524955 TMEM89A2RUT3 159 aa3.65□□□□□ -1.83
CHMP4A-202ENST00000524955 SRRM4A7MD48 611 aaKnown RBP3.65□□□□□ -1.83
CHMP4A-202ENST00000524955 POM121CA8CG34 1229 aa3.65□□□□□ -1.83
CHMP4A-202ENST00000524955 ITGB1BP1O14713 200 aa3.65□□□□□ -1.83
CHMP4A-202ENST00000524955 CTDSPLO15194 276 aa3.65□□□□□ -1.83
CHMP4A-202ENST00000524955 GSTZ1O43708 216 aaPredicted RBP3.65□□□□□ -1.83
CHMP4A-202ENST00000524955 SLC25A17O43808 307 aa3.65□□□□□ -1.83
CHMP4A-202ENST00000524955 RAMP3O60896 148 aa3.65□□□□□ -1.83
CHMP4A-202ENST00000524955 PGLYRP1O75594 196 aaPredicted RBP3.65□□□□□ -1.83
CHMP4A-202ENST00000524955 OR2F2O95006 317 aa3.65□□□□□ -1.83
CHMP4A-202ENST00000524955 CRYZL1O95825 349 aa3.65□□□□□ -1.83
CHMP4A-202ENST00000524955 ZNF735P0CB33 412 aa3.65□□□□□ -1.83
CHMP4A-202ENST00000524955 APELAP0DMC3 54 aa3.65□□□□□ -1.83
CHMP4A-202ENST00000524955 MYOD1P15172 320 aa3.65□□□□□ -1.83
CHMP4A-202ENST00000524955 CD1BP29016 333 aa3.65□□□□□ -1.83
CHMP4A-202ENST00000524955 GNRHRP30968 328 aa3.65□□□□□ -1.83
CHMP4A-202ENST00000524955 DUTP33316 252 aaKnown RBP3.65□□□□□ -1.83
CHMP4A-202ENST00000524955 DYNLT3P51808 116 aa3.65□□□□□ -1.83
CHMP4A-202ENST00000524955 BRWD1-AS2P59051 145 aa3.65□□□□□ -1.83
CHMP4A-202ENST00000524955 GNB1P62873 340 aa3.65□□□□□ -1.83
CHMP4A-202ENST00000524955 PJVKQ0ZLH3 352 aa3.65□□□□□ -1.83
CHMP4A-202ENST00000524955 PLGLAQ15195 96 aa3.65□□□□□ -1.83
CHMP4A-202ENST00000524955 PSG5Q15238 335 aa3.65□□□□□ -1.83
CHMP4A-202ENST00000524955 AANATQ16613 207 aa3.65□□□□□ -1.83
CHMP4A-202ENST00000524955 SP6Q3SY56 376 aa3.65□□□□□ -1.83
CHMP4A-202ENST00000524955 SPANXN2Q5MJ10 180 aa3.65□□□□□ -1.83
CHMP4A-202ENST00000524955 LY6G6FQ5SQ64 297 aa3.65□□□□□ -1.83
CHMP4A-202ENST00000524955 AADACL3Q5VUY0 350 aa3.65□□□□□ -1.83
CHMP4A-202ENST00000524955 ZNF57Q68EA5 555 aaPredicted RBP3.65□□□□□ -1.83
CHMP4A-202ENST00000524955 ZNF660Q6AZW8 331 aaPredicted RBP3.65□□□□□ -1.83
CHMP4A-202ENST00000524955 C11orf88Q6PI97 169 aa3.65□□□□□ -1.83
CHMP4A-202ENST00000524955 DHRS11Q6UWP2 260 aa3.65□□□□□ -1.83
CHMP4A-202ENST00000524955 C12orf54Q6X4T0 127 aa3.65□□□□□ -1.83
CHMP4A-202ENST00000524955 KCTD9Q7L273 389 aa3.65□□□□□ -1.83
CHMP4A-202ENST00000524955 ZNF329Q86UD4 541 aa3.65□□□□□ -1.83
CHMP4A-202ENST00000524955 THNSL2Q86YJ6 484 aa3.65□□□□□ -1.83
CHMP4A-202ENST00000524955 Q8N6K4 173 aa3.65□□□□□ -1.83
CHMP4A-202ENST00000524955 TMEM229BQ8NBD8 167 aa3.65□□□□□ -1.83
CHMP4A-202ENST00000524955 OR5AN1Q8NGI8 311 aa3.65□□□□□ -1.83
CHMP4A-202ENST00000524955 OR51S1Q8NGJ8 323 aa3.65□□□□□ -1.83
CHMP4A-202ENST00000524955 OR4C16Q8NGL9 310 aa3.65□□□□□ -1.83
CHMP4A-202ENST00000524955 OR4C13Q8NGP0 309 aa3.65□□□□□ -1.83
CHMP4A-202ENST00000524955 CASTOR1Q8WTX7 329 aa3.65□□□□□ -1.83
CHMP4A-202ENST00000524955 GIMAP1Q8WWP7 306 aa3.65□□□□□ -1.83
CHMP4A-202ENST00000524955 TRIM63Q969Q1 353 aa3.65□□□□□ -1.83
CHMP4A-202ENST00000524955 MRGPRFQ96AM1 343 aa3.65□□□□□ -1.83
CHMP4A-202ENST00000524955 MOB3AQ96BX8 217 aa3.65□□□□□ -1.83
CHMP4A-202ENST00000524955 RASL11BQ9BPW5 248 aa3.65□□□□□ -1.83
CHMP4A-202ENST00000524955 FAM103A1Q9BTL3 118 aaKnown RBP3.65□□□□□ -1.83
CHMP4A-202ENST00000524955 PRSS22Q9GZN4 317 aa3.65□□□□□ -1.83
CHMP4A-202ENST00000524955 NPFFR1Q9GZQ6 430 aa3.65□□□□□ -1.83
CHMP4A-202ENST00000524955 TOLLIPQ9H0E2 274 aa3.65□□□□□ -1.83
CHMP4A-202ENST00000524955 SERTAD4Q9NUC0 356 aa3.65□□□□□ -1.83
CHMP4A-202ENST00000524955 PRR13Q9NZ81 148 aa3.65□□□□□ -1.83
CHMP4A-202ENST00000524955 METTL1Q9UBP6 276 aaKnown RBP3.65□□□□□ -1.83
CHMP4A-202ENST00000524955 ZNF107Q9UII5 783 aaPredicted RBP3.65□□□□□ -1.83
CHMP4A-202ENST00000524955 PITPNC1Q9UKF7 332 aa3.65□□□□□ -1.83
CHMP4A-202ENST00000524955 MOB4Q9Y3A3 225 aa3.65□□□□□ -1.83
CHMP4A-202ENST00000524955 WASHC3Q9Y3C0 194 aa3.65□□□□□ -1.83
CHMP4A-202ENST00000524955 FBXO7Q9Y3I1 522 aa3.65□□□□□ -1.83
CHMP4A-202ENST00000524955 RNF114Q9Y508 228 aa3.65□□□□□ -1.83
CHMP4A-202ENST00000524955 WSB1Q9Y6I7 421 aa3.65□□□□□ -1.83
CHMP4A-202ENST00000524955 MXRA5Q9NR99 2828 aa3.65□□□□□ -1.83
CHMP4A-202ENST00000524955 TRAV3A0A0B4J244 114 aa3.64□□□□□ -1.83
CHMP4A-202ENST00000524955 CLPSL1A2RUU4 121 aa3.64□□□□□ -1.83
CHMP4A-202ENST00000524955 G3V318 75 aa3.64□□□□□ -1.83
CHMP4A-202ENST00000524955 SHOXO15266 292 aa3.64□□□□□ -1.83
CHMP4A-202ENST00000524955 NBR2O15453 112 aa3.64□□□□□ -1.83
CHMP4A-202ENST00000524955 TXNL1O43396 289 aa3.64□□□□□ -1.83
CHMP4A-202ENST00000524955 TSPAN9O75954 239 aa3.64□□□□□ -1.83
CHMP4A-202ENST00000524955 S1PR2O95136 353 aa3.64□□□□□ -1.83
CHMP4A-202ENST00000524955 NDUFA7O95182 113 aa3.64□□□□□ -1.83
CHMP4A-202ENST00000524955 CA2P00918 260 aa3.64□□□□□ -1.83
CHMP4A-202ENST00000524955 IGLV2-23P01705 113 aa3.64□□□□□ -1.83
CHMP4A-202ENST00000524955 APOA2P02652 100 aa3.64□□□□□ -1.83
CHMP4A-202ENST00000524955 OPN1MWP04001 364 aa3.64□□□□□ -1.83
CHMP4A-202ENST00000524955 CD74P04233 296 aa3.64□□□□□ -1.83
CHMP4A-202ENST00000524955 CSF1P09603 554 aa3.64□□□□□ -1.83
CHMP4A-202ENST00000524955 AKAIN1P0CW23 69 aa3.64□□□□□ -1.83
CHMP4A-202ENST00000524955 SAA1P0DJI8 122 aaPredicted RBP3.64□□□□□ -1.83
CHMP4A-202ENST00000524955 OPN1MW2P0DN77 364 aa3.64□□□□□ -1.83
CHMP4A-202ENST00000524955 OPN1MW3P0DN78 364 aa3.64□□□□□ -1.83
CHMP4A-202ENST00000524955 CD28P10747 220 aa3.64□□□□□ -1.83
CHMP4A-202ENST00000524955 LPAR6P43657 344 aa3.64□□□□□ -1.83
CHMP4A-202ENST00000524955 VDAC2P45880 294 aaPredicted RBP3.64□□□□□ -1.83
CHMP4A-202ENST00000524955 THBS3P49746 956 aa3.64□□□□□ -1.83
CHMP4A-202ENST00000524955 CCR6P51684 374 aa3.64□□□□□ -1.83
CHMP4A-202ENST00000524955 TAS2R19P59542 299 aa3.64□□□□□ -1.83
CHMP4A-202ENST00000524955 MRPS10P82664 201 aaKnown RBP3.64□□□□□ -1.83
CHMP4A-202ENST00000524955 NDPQ00604 133 aa3.64□□□□□ -1.83
CHMP4A-202ENST00000524955 DEFA5Q01523 94 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms