RNA–Protein interactions for RNA: ENST00000524926.5

BEST1-204, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 2,404 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-204ENST00000524926 PRAMEF5Q5TYX0 476 aa12.61□□□□□ -0.39
BEST1-204ENST00000524926 SAT2Q96F10 170 aaPredicted RBP12.61□□□□□ -0.39
BEST1-204ENST00000524926 HRH4Q9H3N8 390 aa12.61□□□□□ -0.39
BEST1-204ENST00000524926 C19orf12Q9NSK7 152 aa12.61□□□□□ -0.39
BEST1-204ENST00000524926 PSENENQ9NZ42 101 aa12.61□□□□□ -0.39
BEST1-204ENST00000524926 NDUFB3O43676 98 aa12.6□□□□□ -0.39
BEST1-204ENST00000524926 RBMXL2O75526 392 aaKnown RBP12.6□□□□□ -0.39
BEST1-204ENST00000524926 SEC11BP0C7V7 166 aa12.6□□□□□ -0.39
BEST1-204ENST00000524926 ZP3P21754 424 aa12.6□□□□□ -0.39
BEST1-204ENST00000524926 TMEM267Q0VDI3 215 aaPredicted RBP12.6□□□□□ -0.39
BEST1-204ENST00000524926 HFEQ30201 348 aa12.6□□□□□ -0.39
BEST1-204ENST00000524926 PXDC1Q5TGL8 231 aa12.6□□□□□ -0.39
BEST1-204ENST00000524926 ANKHD1Q8IWZ3 2542 aaKnown RBP12.6□□□□□ -0.39
BEST1-204ENST00000524926 ZNF295-AS1Q8N0V1 137 aa12.6□□□□□ -0.39
BEST1-204ENST00000524926 LYG1Q8N1E2 194 aa12.6□□□□□ -0.39
BEST1-204ENST00000524926 H1FXQ92522 213 aaKnown RBP12.6□□□□□ -0.39
BEST1-204ENST00000524926 SMIM8Q96KF7 97 aa12.6□□□□□ -0.39
BEST1-204ENST00000524926 SH3BGRL3Q9H299 93 aa12.6□□□□□ -0.39
BEST1-204ENST00000524926 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.6□□□□□ -0.39
BEST1-204ENST00000524926 LINC00312Q9Y6C7 94 aa12.6□□□□□ -0.39
BEST1-204ENST00000524926 KRBOX1C9JBD0 128 aa12.6□□□□□ -0.39
BEST1-204ENST00000524926 ITGB1BP1O14713 200 aa12.6□□□□□ -0.39
BEST1-204ENST00000524926 TXNL1O43396 289 aa12.6□□□□□ -0.39
BEST1-204ENST00000524926 SPP1P10451 314 aa12.6□□□□□ -0.39
BEST1-204ENST00000524926 ERVFRD-1P60508 538 aa12.6□□□□□ -0.39
BEST1-204ENST00000524926 UBE2KP61086 200 aa12.6□□□□□ -0.39
BEST1-204ENST00000524926 ZNF273Q14593 569 aa12.6□□□□□ -0.39
BEST1-204ENST00000524926 PRELID3BQ9Y3B1 194 aa12.6□□□□□ -0.39
BEST1-204ENST00000524926 MARCH11A6NNE9 402 aa12.59□□□□□ -0.39
BEST1-204ENST00000524926 RAB29O14966 203 aa12.59□□□□□ -0.39
BEST1-204ENST00000524926 P0C879 139 aa12.59□□□□□ -0.39
BEST1-204ENST00000524926 TNFRSF9Q07011 255 aa12.59□□□□□ -0.39
BEST1-204ENST00000524926 LRRC10Q5BKY1 277 aa12.59□□□□□ -0.39
BEST1-204ENST00000524926 C1orf229Q6ZS94 237 aaPredicted RBP12.59□□□□□ -0.39
BEST1-204ENST00000524926 R3HDM4Q96D70 268 aa12.59□□□□□ -0.39
BEST1-204ENST00000524926 S1PR3Q99500 378 aa12.59□□□□□ -0.39
BEST1-204ENST00000524926 ABCA4P78363 2273 aa12.59□□□□□ -0.39
BEST1-204ENST00000524926 SAA2-SAA4A0A096LPE2 208 aa12.59□□□□□ -0.39
BEST1-204ENST00000524926 FAM90A26D6RGX4 464 aa12.59□□□□□ -0.39
BEST1-204ENST00000524926 FCN3O75636 299 aa12.59□□□□□ -0.39
BEST1-204ENST00000524926 HPRT1P00492 218 aa12.59□□□□□ -0.39
BEST1-204ENST00000524926 SAA2P0DJI9 122 aaPredicted RBP12.59□□□□□ -0.39
BEST1-204ENST00000524926 SULT1A1P50225 295 aa12.59□□□□□ -0.39
BEST1-204ENST00000524926 BLOC1S1P78537 153 aa12.59□□□□□ -0.39
BEST1-204ENST00000524926 MEF2CQ06413 473 aaPredicted RBP12.59□□□□□ -0.39
BEST1-204ENST00000524926 TUSC1Q2TAM9 212 aa12.59□□□□□ -0.39
BEST1-204ENST00000524926 SPANXN5Q5MJ07 72 aa12.59□□□□□ -0.39
BEST1-204ENST00000524926 NARS2Q96I59 477 aaKnown RBP12.59□□□□□ -0.39
BEST1-204ENST00000524926 GAL3ST2Q9H3Q3 398 aa12.59□□□□□ -0.39
BEST1-204ENST00000524926 LINC00574Q9H8X3 128 aa12.59□□□□□ -0.39
BEST1-204ENST00000524926 LYNX1G3V0Z9 82 aa12.58□□□□□ -0.4
BEST1-204ENST00000524926 TNFRSF13BO14836 293 aaPredicted RBP12.58□□□□□ -0.4
BEST1-204ENST00000524926 SHOXO15266 292 aa12.58□□□□□ -0.4
BEST1-204ENST00000524926 METTL15P1P0C7V9 234 aa12.58□□□□□ -0.4
BEST1-204ENST00000524926 LYNX1P0DP58 116 aa12.58□□□□□ -0.4
BEST1-204ENST00000524926 CCL3L1P16619 93 aa12.58□□□□□ -0.4
BEST1-204ENST00000524926 MRPS11P82912 194 aaKnown RBP12.58□□□□□ -0.4
BEST1-204ENST00000524926 TFF3Q07654 80 aa12.58□□□□□ -0.4
BEST1-204ENST00000524926 MIDNQ504T8 468 aa12.58□□□□□ -0.4
BEST1-204ENST00000524926 TMEM200BQ69YZ2 307 aa12.58□□□□□ -0.4
BEST1-204ENST00000524926 Q6ZRG5 221 aa12.58□□□□□ -0.4
BEST1-204ENST00000524926 RBKSQ9H477 322 aa12.58□□□□□ -0.4
BEST1-204ENST00000524926 RPUSD1Q9UJJ7 312 aaKnown RBP12.58□□□□□ -0.4
BEST1-204ENST00000524926 ITPR1Q14643 2758 aa12.58□□□□□ -0.4
BEST1-204ENST00000524926 MED19A0JLT2 244 aaPredicted RBP12.58□□□□□ -0.4
BEST1-204ENST00000524926 DVL1O14640 695 aa12.58□□□□□ -0.4
BEST1-204ENST00000524926 PRH1P02810 166 aa12.58□□□□□ -0.4
BEST1-204ENST00000524926 AKR1C1Q04828 323 aa12.58□□□□□ -0.4
BEST1-204ENST00000524926 SSX9Q7RTT3 188 aa12.58□□□□□ -0.4
BEST1-204ENST00000524926 ZNF714Q96N38 554 aa12.58□□□□□ -0.4
BEST1-204ENST00000524926 MMP26Q9NRE1 261 aa12.58□□□□□ -0.4
BEST1-204ENST00000524926 CTSZQ9UBR2 303 aa12.58□□□□□ -0.4
BEST1-204ENST00000524926 HSPB7Q9UBY9 170 aa12.58□□□□□ -0.4
BEST1-204ENST00000524926 GAB2Q9UQC2 676 aa12.58□□□□□ -0.4
BEST1-204ENST00000524926 RAB19A4D1S5 217 aa12.57□□□□□ -0.4
BEST1-204ENST00000524926 COL8A2P25067 703 aa12.57□□□□□ -0.4
BEST1-204ENST00000524926 STPG2Q8N412 459 aa12.57□□□□□ -0.4
BEST1-204ENST00000524926 ZNF439Q8NDP4 499 aa12.57□□□□□ -0.4
BEST1-204ENST00000524926 ATP6V0CP27449 155 aa12.57□□□□□ -0.4
BEST1-204ENST00000524926 TMEM30BQ3MIR4 351 aa12.57□□□□□ -0.4
BEST1-204ENST00000524926 TMEM182Q6ZP80 229 aaPredicted RBP12.57□□□□□ -0.4
BEST1-204ENST00000524926 BPIFCQ8NFQ6 507 aa12.57□□□□□ -0.4
BEST1-204ENST00000524926 ATP5SQ99766 215 aa12.57□□□□□ -0.4
BEST1-204ENST00000524926 TMEM204Q9BSN7 226 aa12.57□□□□□ -0.4
BEST1-204ENST00000524926 PARP11Q9NR21 331 aa12.57□□□□□ -0.4
BEST1-204ENST00000524926 RFNGQ9Y644 331 aa12.57□□□□□ -0.4
BEST1-204ENST00000524926 SCO1O75880 301 aa12.56□□□□□ -0.4
BEST1-204ENST00000524926 DFFBO76075 338 aa12.56□□□□□ -0.4
BEST1-204ENST00000524926 DANCRP0C864 163 aa12.56□□□□□ -0.4
BEST1-204ENST00000524926 LOXP28300 417 aaPredicted RBP12.56□□□□□ -0.4
BEST1-204ENST00000524926 TAS2R30P59541 319 aa12.56□□□□□ -0.4
BEST1-204ENST00000524926 SLC25A24Q6NUK1 477 aa12.56□□□□□ -0.4
BEST1-204ENST00000524926 VKORC1L1Q8N0U8 176 aa12.56□□□□□ -0.4
BEST1-204ENST00000524926 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.56□□□□□ -0.4
BEST1-204ENST00000524926 OR2G3Q8NGZ4 309 aa12.56□□□□□ -0.4
BEST1-204ENST00000524926 CACNA1AO00555 2505 aa12.56□□□□□ -0.4
BEST1-204ENST00000524926 DOCK11Q5JSL3 2073 aa12.56□□□□□ -0.4
BEST1-204ENST00000524926 NDUFA2O43678 99 aa12.56□□□□□ -0.4
BEST1-204ENST00000524926 C1QL1O75973 258 aa12.56□□□□□ -0.4
BEST1-204ENST00000524926 UQCRFS1P47985 274 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms