RNA–Protein interactions for RNA: ENST00000524895.5

TSPAN4-213, Transcript of tetraspanin 4, humanhuman

TSL 4

Gene TSPAN4, Length 401 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-213ENST00000524895 CT45A6P0DMU7 189 aa12.81□□□□□ -0.36
TSPAN4-213ENST00000524895 CT45A5P0DMU8 189 aa12.81□□□□□ -0.36
TSPAN4-213ENST00000524895 CT45A7P0DMV0 189 aa12.81□□□□□ -0.36
TSPAN4-213ENST00000524895 VSIG10L2P0DP72 767 aa12.81□□□□□ -0.36
TSPAN4-213ENST00000524895 F2RP25116 425 aa12.81□□□□□ -0.36
TSPAN4-213ENST00000524895 ARHGDIBP52566 201 aa12.81□□□□□ -0.36
TSPAN4-213ENST00000524895 RPL30P62888 115 aaKnown RBP12.81□□□□□ -0.36
TSPAN4-213ENST00000524895 PPP1R1AQ13522 171 aa12.81□□□□□ -0.36
TSPAN4-213ENST00000524895 GLDNQ6ZMI3 551 aaPredicted RBP12.81□□□□□ -0.36
TSPAN4-213ENST00000524895 MOB3BQ86TA1 216 aa12.81□□□□□ -0.36
TSPAN4-213ENST00000524895 C17orf50Q8WW18 174 aa12.81□□□□□ -0.36
TSPAN4-213ENST00000524895 MALSU1Q96EH3 234 aa12.81□□□□□ -0.36
TSPAN4-213ENST00000524895 NABP2Q9BQ15 211 aa12.81□□□□□ -0.36
TSPAN4-213ENST00000524895 MS4A7Q9GZW8 240 aaPredicted RBP12.81□□□□□ -0.36
TSPAN4-213ENST00000524895 ALX4Q9H161 411 aaPredicted RBP12.81□□□□□ -0.36
TSPAN4-213ENST00000524895 KCNIP3Q9Y2W7 256 aa12.81□□□□□ -0.36
TSPAN4-213ENST00000524895 PRELID3BQ9Y3B1 194 aa12.81□□□□□ -0.36
TSPAN4-213ENST00000524895 FAM96BQ9Y3D0 163 aa12.81□□□□□ -0.36
TSPAN4-213ENST00000524895 ABCA1O95477 2261 aa12.81□□□□□ -0.36
TSPAN4-213ENST00000524895 IGHV1-3A0A0C4DH29 117 aa12.8□□□□□ -0.36
TSPAN4-213ENST00000524895 A0A0U1RQK1 487 aa12.8□□□□□ -0.36
TSPAN4-213ENST00000524895 C3orf85A0A1B0GTC6 90 aa12.8□□□□□ -0.36
TSPAN4-213ENST00000524895 A0A1W2PPI3 338 aa12.8□□□□□ -0.36
TSPAN4-213ENST00000524895 H0Y980 276 aa12.8□□□□□ -0.36
TSPAN4-213ENST00000524895 IFNA2P01563 188 aa12.8□□□□□ -0.36
TSPAN4-213ENST00000524895 APOA2P02652 100 aa12.8□□□□□ -0.36
TSPAN4-213ENST00000524895 ANXA3P12429 323 aa12.8□□□□□ -0.36
TSPAN4-213ENST00000524895 LINC00205P59089 165 aa12.8□□□□□ -0.36
TSPAN4-213ENST00000524895 DHODHQ02127 395 aa12.8□□□□□ -0.36
TSPAN4-213ENST00000524895 OR2B11Q5JQS5 317 aa12.8□□□□□ -0.36
TSPAN4-213ENST00000524895 CLEC9AQ6UXN8 241 aa12.8□□□□□ -0.36
TSPAN4-213ENST00000524895 IL17RELQ6ZVW7 336 aa12.8□□□□□ -0.36
TSPAN4-213ENST00000524895 OR8H3Q8N146 312 aa12.8□□□□□ -0.36
TSPAN4-213ENST00000524895 ZNF383Q8NA42 475 aa12.8□□□□□ -0.36
TSPAN4-213ENST00000524895 GPN1Q9HCN4 374 aaPredicted RBP12.8□□□□□ -0.36
TSPAN4-213ENST00000524895 B3GALNT1O75752 331 aa12.79□□□□□ -0.36
TSPAN4-213ENST00000524895 IL5P05113 134 aa12.79□□□□□ -0.36
TSPAN4-213ENST00000524895 OR5AC1P0C628 307 aa12.79□□□□□ -0.36
TSPAN4-213ENST00000524895 PAX6P26367 422 aa12.79□□□□□ -0.36
TSPAN4-213ENST00000524895 SRP14P37108 136 aaKnown RBP12.79□□□□□ -0.36
TSPAN4-213ENST00000524895 KIR2DS2P43631 304 aa12.79□□□□□ -0.36
TSPAN4-213ENST00000524895 SUPT4H1P63272 117 aaKnown RBP12.79□□□□□ -0.36
TSPAN4-213ENST00000524895 TAGLNQ01995 201 aaKnown RBP12.79□□□□□ -0.36
TSPAN4-213ENST00000524895 CBX3Q13185 183 aa12.79□□□□□ -0.36
TSPAN4-213ENST00000524895 DHRS2Q13268 280 aa12.79□□□□□ -0.36
TSPAN4-213ENST00000524895 SLC9A3R2Q15599 337 aa12.79□□□□□ -0.36
TSPAN4-213ENST00000524895 TATDN3Q17R31 274 aa12.79□□□□□ -0.36
TSPAN4-213ENST00000524895 RTL8BQ17RB0 113 aa12.79□□□□□ -0.36
TSPAN4-213ENST00000524895 LYG2Q86SG7 212 aa12.79□□□□□ -0.36
TSPAN4-213ENST00000524895 SPAG16Q8N0X2 631 aa12.79□□□□□ -0.36
TSPAN4-213ENST00000524895 DYNAPQ8N1N2 210 aa12.79□□□□□ -0.36
TSPAN4-213ENST00000524895 CASTOR1Q8WTX7 329 aa12.79□□□□□ -0.36
TSPAN4-213ENST00000524895 AJUBAQ96IF1 538 aa12.79□□□□□ -0.36
TSPAN4-213ENST00000524895 TP53RKQ96S44 253 aa12.79□□□□□ -0.36
TSPAN4-213ENST00000524895 SEC22CQ9BRL7 303 aa12.79□□□□□ -0.36
TSPAN4-213ENST00000524895 C9orf170A2RU37 121 aa12.78□□□□□ -0.36
TSPAN4-213ENST00000524895 H0YJW9 148 aa12.78□□□□□ -0.36
TSPAN4-213ENST00000524895 H7C2Y5 167 aa12.78□□□□□ -0.36
TSPAN4-213ENST00000524895 TIMM23O14925 209 aa12.78□□□□□ -0.36
TSPAN4-213ENST00000524895 FCGR3BO75015 233 aa12.78□□□□□ -0.36
TSPAN4-213ENST00000524895 SFT2D2O95562 160 aa12.78□□□□□ -0.36
TSPAN4-213ENST00000524895 SERPINE2P07093 398 aa12.78□□□□□ -0.36
TSPAN4-213ENST00000524895 FBP1P09467 338 aa12.78□□□□□ -0.36
TSPAN4-213ENST00000524895 RAB13P51153 203 aa12.78□□□□□ -0.36
TSPAN4-213ENST00000524895 SP6Q3SY56 376 aa12.78□□□□□ -0.36
TSPAN4-213ENST00000524895 TCTEX1D1Q8N7M0 179 aa12.78□□□□□ -0.36
TSPAN4-213ENST00000524895 OR5AN1Q8NGI8 311 aa12.78□□□□□ -0.36
TSPAN4-213ENST00000524895 OR52B4Q8NGK2 314 aa12.78□□□□□ -0.36
TSPAN4-213ENST00000524895 OR4S2Q8NH73 311 aa12.78□□□□□ -0.36
TSPAN4-213ENST00000524895 CD300LFQ8TDQ1 290 aa12.78□□□□□ -0.36
TSPAN4-213ENST00000524895 DDB2Q92466 427 aa12.78□□□□□ -0.36
TSPAN4-213ENST00000524895 GALNT14Q96FL9 552 aa12.78□□□□□ -0.36
TSPAN4-213ENST00000524895 SLC35D1Q9NTN3 355 aa12.78□□□□□ -0.36
TSPAN4-213ENST00000524895 TMEM160Q9NX00 188 aa12.78□□□□□ -0.36
TSPAN4-213ENST00000524895 IGHV3-72A0A0B4J1Y9 119 aa12.77□□□□□ -0.37
TSPAN4-213ENST00000524895 A0A0B4J293 547 aa12.77□□□□□ -0.37
TSPAN4-213ENST00000524895 CREBL2O60519 120 aaPredicted RBP12.77□□□□□ -0.37
TSPAN4-213ENST00000524895 RRASP10301 218 aa12.77□□□□□ -0.37
TSPAN4-213ENST00000524895 BRS3P32247 399 aa12.77□□□□□ -0.37
TSPAN4-213ENST00000524895 MC5RP33032 325 aa12.77□□□□□ -0.37
TSPAN4-213ENST00000524895 SRPXP78539 464 aa12.77□□□□□ -0.37
TSPAN4-213ENST00000524895 C9orf139Q6ZV77 190 aa12.77□□□□□ -0.37
TSPAN4-213ENST00000524895 ZNF431Q8TF32 576 aaPredicted RBP12.77□□□□□ -0.37
TSPAN4-213ENST00000524895 TMEM222Q9H0R3 208 aa12.77□□□□□ -0.37
TSPAN4-213ENST00000524895 WASHC3Q9Y3C0 194 aa12.77□□□□□ -0.37
TSPAN4-213ENST00000524895 ALG5Q9Y673 324 aa12.77□□□□□ -0.37
TSPAN4-213ENST00000524895 ACANP16112 2415 aa12.77□□□□□ -0.37
TSPAN4-213ENST00000524895 RBFOX2O43251 390 aaKnown RBP eCLIP12.76□□□□□ -0.372e-6■■■■□ 21.7
TSPAN4-213ENST00000524895 RAMP3O60896 148 aa12.76□□□□□ -0.37
TSPAN4-213ENST00000524895 DUS4LO95620 317 aaKnown RBP12.76□□□□□ -0.37
TSPAN4-213ENST00000524895 UCP1P25874 307 aa12.76□□□□□ -0.37
TSPAN4-213ENST00000524895 TMEM187Q14656 261 aa12.76□□□□□ -0.37
TSPAN4-213ENST00000524895 DHRS7BQ6IAN0 325 aaPredicted RBP12.76□□□□□ -0.37
TSPAN4-213ENST00000524895 PDPNQ86YL7 162 aa12.76□□□□□ -0.37
TSPAN4-213ENST00000524895 COQ8AQ8NI60 647 aa12.76□□□□□ -0.37
TSPAN4-213ENST00000524895 C22orf15Q8WYQ4 148 aa12.76□□□□□ -0.37
TSPAN4-213ENST00000524895 CFHR4Q92496 578 aa12.76□□□□□ -0.37
TSPAN4-213ENST00000524895 FAM212BQ9NTI7 297 aaPredicted RBP12.76□□□□□ -0.37
TSPAN4-213ENST00000524895 PRR13Q9NZ81 148 aa12.76□□□□□ -0.37
TSPAN4-213ENST00000524895 SOX21Q9Y651 276 aaPredicted RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms