RNA–Protein interactions for RNA: ENST00000524165.5

PVT1-220, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 458 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-220ENST00000524165 CANT1Q8WVQ1 401 aa12.8□□□□□ -0.36
PVT1-220ENST00000524165 FAM46BQ96A09 425 aa12.8□□□□□ -0.36
PVT1-220ENST00000524165 SPAG8Q99932 426 aaPredicted RBP12.8□□□□□ -0.36
PVT1-220ENST00000524165 HRH4Q9H3N8 390 aa12.8□□□□□ -0.36
PVT1-220ENST00000524165 RIBC2Q9H4K1 309 aa12.8□□□□□ -0.36
PVT1-220ENST00000524165 TMEM138Q9NPI0 162 aa12.8□□□□□ -0.36
PVT1-220ENST00000524165 SCRT2Q9NQ03 307 aa12.8□□□□□ -0.36
PVT1-220ENST00000524165 EXOSC1Q9Y3B2 195 aaKnown RBP12.8□□□□□ -0.36
PVT1-220ENST00000524165 UBE2QL1A1L167 161 aa12.79□□□□□ -0.36
PVT1-220ENST00000524165 C16orf90A8MZG2 172 aa12.79□□□□□ -0.36
PVT1-220ENST00000524165 J3QRE1 110 aa12.79□□□□□ -0.36
PVT1-220ENST00000524165 PRH1P02810 166 aa12.79□□□□□ -0.36
PVT1-220ENST00000524165 P0DMU3 169 aa12.79□□□□□ -0.36
PVT1-220ENST00000524165 FAM231AP0DMU4 169 aa12.79□□□□□ -0.36
PVT1-220ENST00000524165 FAM231CP0DMU5 169 aa12.79□□□□□ -0.36
PVT1-220ENST00000524165 HMGN3Q15651 99 aa12.79□□□□□ -0.36
PVT1-220ENST00000524165 FAM106AQ4KMX7 169 aa12.79□□□□□ -0.36
PVT1-220ENST00000524165 DDI2Q5TDH0 399 aa12.79□□□□□ -0.36
PVT1-220ENST00000524165 ZNF383Q8NA42 475 aa12.79□□□□□ -0.36
PVT1-220ENST00000524165 DRAXINQ8NBI3 349 aaPredicted RBP12.79□□□□□ -0.36
PVT1-220ENST00000524165 OR11H2Q8NH07 326 aa12.79□□□□□ -0.36
PVT1-220ENST00000524165 MARC2Q969Z3 335 aa12.79□□□□□ -0.36
PVT1-220ENST00000524165 ASB9Q96DX5 294 aa12.79□□□□□ -0.36
PVT1-220ENST00000524165 NSL1Q96IY1 281 aa12.79□□□□□ -0.36
PVT1-220ENST00000524165 C4orf36Q96KX1 117 aa12.79□□□□□ -0.36
PVT1-220ENST00000524165 OR14A2Q96R54 314 aa12.79□□□□□ -0.36
PVT1-220ENST00000524165 ABRACLQ9P1F3 81 aa12.79□□□□□ -0.36
PVT1-220ENST00000524165 ZNF320A2RRD8 509 aa12.78□□□□□ -0.36
PVT1-220ENST00000524165 PROP1O75360 226 aa12.78□□□□□ -0.36
PVT1-220ENST00000524165 APOA2P02652 100 aa12.78□□□□□ -0.36
PVT1-220ENST00000524165 C8orf88P0DMB2 117 aa12.78□□□□□ -0.36
PVT1-220ENST00000524165 FUT3P21217 361 aa12.78□□□□□ -0.36
PVT1-220ENST00000524165 ADMP35318 185 aa12.78□□□□□ -0.36
PVT1-220ENST00000524165 C15orf32Q32M92 178 aa12.78□□□□□ -0.36
PVT1-220ENST00000524165 ODF3L2Q3SX64 289 aa12.78□□□□□ -0.36
PVT1-220ENST00000524165 SOHLH1Q5JUK2 328 aa12.78□□□□□ -0.36
PVT1-220ENST00000524165 GLT8D1Q68CQ7 371 aa12.78□□□□□ -0.36
PVT1-220ENST00000524165 IL1F10Q8WWZ1 152 aa12.78□□□□□ -0.36
PVT1-220ENST00000524165 PDCD1LG2Q9BQ51 273 aa12.78□□□□□ -0.36
PVT1-220ENST00000524165 RNF126Q9BV68 326 aa12.78□□□□□ -0.36
PVT1-220ENST00000524165 CSTL1Q9H114 145 aa12.78□□□□□ -0.36
PVT1-220ENST00000524165 OR8J1Q8NGP2 316 aa12.77□□□□□ -0.37
PVT1-220ENST00000524165 TRAV10A0A0B4J240 114 aa12.76□□□□□ -0.37
PVT1-220ENST00000524165 MPTX1A8MV57 137 aa12.76□□□□□ -0.37
PVT1-220ENST00000524165 SHOXO15266 292 aa12.76□□□□□ -0.37
PVT1-220ENST00000524165 MPPED1O15442 326 aa12.76□□□□□ -0.37
PVT1-220ENST00000524165 CD2P06729 351 aa12.76□□□□□ -0.37
PVT1-220ENST00000524165 SOX2P48431 317 aa12.76□□□□□ -0.37
PVT1-220ENST00000524165 LINC00205P59089 165 aa12.76□□□□□ -0.37
PVT1-220ENST00000524165 MRGPRG-AS1Q2M3A8 158 aa12.76□□□□□ -0.37
PVT1-220ENST00000524165 Q6ZR54 194 aa12.76□□□□□ -0.37
PVT1-220ENST00000524165 C6orf62Q9GZU0 229 aaPredicted RBP12.76□□□□□ -0.37
PVT1-220ENST00000524165 C5orf66Q9H5L9 145 aa12.76□□□□□ -0.37
PVT1-220ENST00000524165 TSPAN4O14817 238 aa12.75□□□□□ -0.37
PVT1-220ENST00000524165 DEFB4AO15263 64 aa12.75□□□□□ -0.37
PVT1-220ENST00000524165 BDKRB2P30411 391 aa12.75□□□□□ -0.37
PVT1-220ENST00000524165 ARL3P36405 182 aa12.75□□□□□ -0.37
PVT1-220ENST00000524165 PPP3R1P63098 170 aa12.75□□□□□ -0.37
PVT1-220ENST00000524165 SIGIRRQ6IA17 410 aa12.75□□□□□ -0.37
PVT1-220ENST00000524165 ACBD7Q8N6N7 88 aa12.75□□□□□ -0.37
PVT1-220ENST00000524165 OR4A5Q8NH83 315 aa12.75□□□□□ -0.37
PVT1-220ENST00000524165 EDARADDQ8WWZ3 215 aa12.75□□□□□ -0.37
PVT1-220ENST00000524165 SRSF12Q8WXF0 261 aaKnown RBP12.75□□□□□ -0.37
PVT1-220ENST00000524165 MRPL48Q96GC5 212 aaKnown RBP12.75□□□□□ -0.37
PVT1-220ENST00000524165 CYYR1Q96J86 154 aa12.75□□□□□ -0.37
PVT1-220ENST00000524165 MYCBPQ99417 103 aaPredicted RBP12.75□□□□□ -0.37
PVT1-220ENST00000524165 ISG20L2Q9H9L3 353 aaKnown RBP12.75□□□□□ -0.37
PVT1-220ENST00000524165 MRPL27Q9P0M9 148 aaKnown RBP12.75□□□□□ -0.37
PVT1-220ENST00000524165 AQP12BA6NM10 295 aa12.74□□□□□ -0.37
PVT1-220ENST00000524165 OR2J3O76001 311 aa12.74□□□□□ -0.37
PVT1-220ENST00000524165 S1PR2O95136 353 aa12.74□□□□□ -0.37
PVT1-220ENST00000524165 MRPL28Q13084 256 aaKnown RBP12.74□□□□□ -0.37
PVT1-220ENST00000524165 AQP12AQ8IXF9 295 aa12.74□□□□□ -0.37
PVT1-220ENST00000524165 SYS1Q8N2H4 156 aa12.74□□□□□ -0.37
PVT1-220ENST00000524165 TTC9CQ8N5M4 171 aa12.74□□□□□ -0.37
PVT1-220ENST00000524165 SETD9Q8NE22 299 aa12.74□□□□□ -0.37
PVT1-220ENST00000524165 HARBI1Q96MB7 349 aa12.74□□□□□ -0.37
PVT1-220ENST00000524165 ZNF184Q99676 751 aaPredicted RBP12.74□□□□□ -0.37
PVT1-220ENST00000524165 C11orf54Q9H0W9 315 aaPredicted RBP12.74□□□□□ -0.37
PVT1-220ENST00000524165 SLC35D1Q9NTN3 355 aa12.74□□□□□ -0.37
PVT1-220ENST00000524165 UBR4Q5T4S7 5183 aa12.73□□□□□ -0.37
PVT1-220ENST00000524165 PDCD6O75340 191 aa12.73□□□□□ -0.37
PVT1-220ENST00000524165 BAG2O95816 211 aa12.73□□□□□ -0.37
PVT1-220ENST00000524165 AMBPP02760 352 aa12.73□□□□□ -0.37
PVT1-220ENST00000524165 GALP22466 123 aa12.73□□□□□ -0.37
PVT1-220ENST00000524165 TNXAQ16473 311 aa12.73□□□□□ -0.37
PVT1-220ENST00000524165 ZNF585BQ52M93 769 aa12.73□□□□□ -0.37
PVT1-220ENST00000524165 OR5B3Q8NH48 314 aa12.73□□□□□ -0.37
PVT1-220ENST00000524165 CD300LFQ8TDQ1 290 aa12.73□□□□□ -0.37
PVT1-220ENST00000524165 CCDC140Q96MF4 163 aa12.73□□□□□ -0.37
PVT1-220ENST00000524165 SELENOIQ9C0D9 397 aa12.73□□□□□ -0.37
PVT1-220ENST00000524165 RPL36Q9Y3U8 105 aaKnown RBP12.73□□□□□ -0.37
PVT1-220ENST00000524165 E9PI62 339 aa12.72□□□□□ -0.37
PVT1-220ENST00000524165 HLA-DMBP28068 263 aa12.72□□□□□ -0.37
PVT1-220ENST00000524165 ELLP55199 621 aaPredicted RBP12.72□□□□□ -0.37
PVT1-220ENST00000524165 KDM4DQ6B0I6 523 aa12.72□□□□□ -0.37
PVT1-220ENST00000524165 CLEC19AQ6UXS0 136 aa12.72□□□□□ -0.37
PVT1-220ENST00000524165 GPR148Q8TDV2 347 aa12.72□□□□□ -0.37
PVT1-220ENST00000524165 PTX4Q96A99 478 aa12.72□□□□□ -0.37
PVT1-220ENST00000524165 Q96M66 194 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms